RNA–Protein interactions for RNA: ENST00000511822.1

CDH9-204, Transcript of cadherin 9, humanhuman

TSL 4

Gene CDH9, Length 532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-204ENST00000511822 IFFO2Q5TF58 517 aa11.44□□□□□ -0.58
CDH9-204ENST00000511822 UGGT2Q9NYU1 1516 aa11.44□□□□□ -0.58
CDH9-204ENST00000511822 ZCCHC11Q5TAX3 1644 aaKnown RBP11.43□□□□□ -0.58
CDH9-204ENST00000511822 ADGRG1Q9Y653 693 aa11.42□□□□□ -0.58
CDH9-204ENST00000511822 ITGBL1O95965 494 aaPredicted RBP11.41□□□□□ -0.58
CDH9-204ENST00000511822 PPP4CP60510 307 aa11.41□□□□□ -0.58
CDH9-204ENST00000511822 TTBK1Q5TCY1 1321 aaPredicted RBP11.4□□□□□ -0.58
CDH9-204ENST00000511822 HDGFP51858 240 aaKnown RBP11.4□□□□□ -0.58
CDH9-204ENST00000511822 KIAA0556O60303 1618 aa11.39□□□□□ -0.59
CDH9-204ENST00000511822 GPR37O15354 613 aa11.39□□□□□ -0.59
CDH9-204ENST00000511822 HIC1Q14526 733 aa11.39□□□□□ -0.59
CDH9-204ENST00000511822 SWT1Q5T5J6 900 aaKnown RBP11.39□□□□□ -0.59
CDH9-204ENST00000511822 CD109Q6YHK3 1445 aa11.38□□□□□ -0.59
CDH9-204ENST00000511822 RBM46Q8TBY0 533 aaKnown RBP11.38□□□□□ -0.59
CDH9-204ENST00000511822 CFAP43Q8NDM7 1665 aa11.37□□□□□ -0.59
CDH9-204ENST00000511822 RNF40O75150 1001 aa11.37□□□□□ -0.59
CDH9-204ENST00000511822 FAM161AQ3B820 660 aa11.37□□□□□ -0.59
CDH9-204ENST00000511822 ARAP3Q8WWN8 1544 aa11.36□□□□□ -0.59
CDH9-204ENST00000511822 DNAJB2P25686 324 aa11.35□□□□□ -0.59
CDH9-204ENST00000511822 SLF2Q8IX21 1173 aa11.35□□□□□ -0.59
CDH9-204ENST00000511822 RAPGEF2Q9Y4G8 1499 aa11.34□□□□□ -0.59
CDH9-204ENST00000511822 GNPATO15228 680 aa11.34□□□□□ -0.59
CDH9-204ENST00000511822 PTPRMP28827 1452 aa11.33□□□□□ -0.6
CDH9-204ENST00000511822 A0A0G2JS52 829 aa11.33□□□□□ -0.6
CDH9-204ENST00000511822 FECHP22830 423 aa11.33□□□□□ -0.6
CDH9-204ENST00000511822 GPIHBP1Q8IV16 184 aa11.33□□□□□ -0.6
CDH9-204ENST00000511822 TMEM134Q9H6X4 195 aa11.33□□□□□ -0.6
CDH9-204ENST00000511822 KIF21BO75037 1637 aa11.33□□□□□ -0.6
CDH9-204ENST00000511822 ABCA8O94911 1581 aa11.33□□□□□ -0.6
CDH9-204ENST00000511822 RCCD1A6NED2 376 aa11.32□□□□□ -0.6
CDH9-204ENST00000511822 NECTIN2Q92692 538 aa11.32□□□□□ -0.6
CDH9-204ENST00000511822 PHLDB1Q86UU1 1377 aa11.31□□□□□ -0.6
CDH9-204ENST00000511822 ADAMTSL3P82987 1691 aa11.31□□□□□ -0.6
CDH9-204ENST00000511822 SLC4A3P48751 1232 aa11.31□□□□□ -0.6
CDH9-204ENST00000511822 APLP1P51693 650 aa11.31□□□□□ -0.6
CDH9-204ENST00000511822 KCNC4Q03721 635 aa11.31□□□□□ -0.6
CDH9-204ENST00000511822 PXYLP1Q8TE99 480 aa11.31□□□□□ -0.6
CDH9-204ENST00000511822 PCF11O94913 1555 aaKnown RBP11.31□□□□□ -0.6
CDH9-204ENST00000511822 OATP04181 439 aa11.3□□□□□ -0.6
CDH9-204ENST00000511822 GOLGA3Q08378 1498 aa11.3□□□□□ -0.6
CDH9-204ENST00000511822 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.29□□□□□ -0.6
CDH9-204ENST00000511822 METTL3Q86U44 580 aaKnown RBP11.29□□□□□ -0.6
CDH9-204ENST00000511822 LMTK3Q96Q04 1460 aa11.29□□□□□ -0.6
CDH9-204ENST00000511822 TULP1O00294 542 aaPredicted RBP11.28□□□□□ -0.6
CDH9-204ENST00000511822 TJAP1Q5JTD0 557 aa11.28□□□□□ -0.6
CDH9-204ENST00000511822 MTRQ99707 1265 aa11.26□□□□□ -0.61
CDH9-204ENST00000511822 NEO1Q92859 1461 aa11.25□□□□□ -0.61
CDH9-204ENST00000511822 ABCA9Q8IUA7 1624 aa11.24□□□□□ -0.61
CDH9-204ENST00000511822 BCORL1Q5H9F3 1711 aa11.23□□□□□ -0.61
CDH9-204ENST00000511822 RGS20O76081 388 aa11.23□□□□□ -0.61
CDH9-204ENST00000511822 PRR14Q9BWN1 585 aa11.23□□□□□ -0.61
CDH9-204ENST00000511822 IL21Q9HBE4 155 aa11.23□□□□□ -0.61
CDH9-204ENST00000511822 SLC24A1O60721 1099 aa11.22□□□□□ -0.61
CDH9-204ENST00000511822 FRMPD1Q5SYB0 1578 aa11.22□□□□□ -0.61
CDH9-204ENST00000511822 ARHGEF40Q8TER5 1519 aa11.22□□□□□ -0.61
CDH9-204ENST00000511822 MADDQ8WXG6 1647 aa11.22□□□□□ -0.61
CDH9-204ENST00000511822 CTTNBP2Q8WZ74 1663 aa11.21□□□□□ -0.61
CDH9-204ENST00000511822 ATP10BO94823 1461 aa11.2□□□□□ -0.62
CDH9-204ENST00000511822 CFHP08603 1231 aa11.19□□□□□ -0.62
CDH9-204ENST00000511822 SLC10A3P09131 477 aa11.19□□□□□ -0.62
CDH9-204ENST00000511822 ZNF516Q92618 1163 aa11.19□□□□□ -0.62
CDH9-204ENST00000511822 RAPGEF3O95398 923 aa11.18□□□□□ -0.62
CDH9-204ENST00000511822 COPS2P61201 443 aa11.18□□□□□ -0.62
CDH9-204ENST00000511822 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDH9-204ENST00000511822 PHOX2BQ99453 314 aa11.18□□□□□ -0.62
CDH9-204ENST00000511822 MAP2K5Q13163 448 aa11.17□□□□□ -0.62
CDH9-204ENST00000511822 PCDHB3Q9Y5E6 796 aa11.17□□□□□ -0.62
CDH9-204ENST00000511822 PRXQ9BXM0 1461 aa11.17□□□□□ -0.62
CDH9-204ENST00000511822 KMT5BQ4FZB7 885 aa11.16□□□□□ -0.62
CDH9-204ENST00000511822 NLRP7Q8WX94 980 aa11.16□□□□□ -0.62
CDH9-204ENST00000511822 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
CDH9-204ENST00000511822 FHOD3Q2V2M9 1422 aa11.16□□□□□ -0.62
CDH9-204ENST00000511822 ACTN4O43707 911 aaKnown RBP11.15□□□□□ -0.62
CDH9-204ENST00000511822 ZMYM4Q5VZL5 1548 aa11.14□□□□□ -0.63
CDH9-204ENST00000511822 ARID4BQ4LE39 1312 aaPredicted RBP11.14□□□□□ -0.63
CDH9-204ENST00000511822 BLOC1S3Q6QNY0 202 aa11.14□□□□□ -0.63
CDH9-204ENST00000511822 POGZQ7Z3K3 1410 aa11.14□□□□□ -0.63
CDH9-204ENST00000511822 RIMS1Q86UR5 1692 aaKnown RBP11.14□□□□□ -0.63
CDH9-204ENST00000511822 FANCAO15360 1455 aa11.13□□□□□ -0.63
CDH9-204ENST00000511822 DENND4BO75064 1496 aaPredicted RBP11.13□□□□□ -0.63
CDH9-204ENST00000511822 AKNAQ7Z591 1439 aa11.13□□□□□ -0.63
CDH9-204ENST00000511822 SOCS7O14512 581 aa11.13□□□□□ -0.63
CDH9-204ENST00000511822 LMOD2Q6P5Q4 547 aa11.13□□□□□ -0.63
CDH9-204ENST00000511822 IRF6O14896 467 aa11.12□□□□□ -0.63
CDH9-204ENST00000511822 ZPR1O75312 459 aa11.12□□□□□ -0.63
CDH9-204ENST00000511822 RSPH4AQ5TD94 716 aa11.12□□□□□ -0.63
CDH9-204ENST00000511822 FAM9AQ8IZU1 332 aaPredicted RBP11.12□□□□□ -0.63
CDH9-204ENST00000511822 NKX2-3Q8TAU0 364 aa11.12□□□□□ -0.63
CDH9-204ENST00000511822 MAGI2Q86UL8 1455 aa11.12□□□□□ -0.63
CDH9-204ENST00000511822 HSPA2P54652 639 aa11.11□□□□□ -0.63
CDH9-204ENST00000511822 SAMD9Q5K651 1589 aa11.11□□□□□ -0.63
CDH9-204ENST00000511822 TTC37Q6PGP7 1564 aa11.11□□□□□ -0.63
CDH9-204ENST00000511822 MINK1Q8N4C8 1332 aaPredicted RBP11.1□□□□□ -0.63
CDH9-204ENST00000511822 EFCAB5A4FU69 1503 aa11.1□□□□□ -0.63
CDH9-204ENST00000511822 RICTORQ6R327 1708 aa11.1□□□□□ -0.63
CDH9-204ENST00000511822 CFAP74Q9C0B2 1584 aa11.1□□□□□ -0.63
CDH9-204ENST00000511822 RAPGEF6Q8TEU7 1601 aa11.09□□□□□ -0.63
CDH9-204ENST00000511822 NUP153P49790 1475 aaKnown RBP11.09□□□□□ -0.63
CDH9-204ENST00000511822 DISP3Q9P2K9 1392 aa11.09□□□□□ -0.63
CDH9-204ENST00000511822 DDX11L8A8MPP1 907 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms