RNA–Protein interactions for RNA: ENST00000509977.1

RETREG1-205, Transcript of reticulophagy regulator 1, humanhuman

TSL 5

Gene RETREG1, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-205ENST00000509977 KIF12Q96FN5 646 aa10.84□□□□□ -0.67
RETREG1-205ENST00000509977 PIK3R4Q99570 1358 aa10.84□□□□□ -0.67
RETREG1-205ENST00000509977 XRN1Q8IZH2 1706 aaKnown RBP10.84□□□□□ -0.67
RETREG1-205ENST00000509977 NEXMIFQ5QGS0 1516 aa10.84□□□□□ -0.67
RETREG1-205ENST00000509977 TMEM94Q12767 1356 aa10.83□□□□□ -0.68
RETREG1-205ENST00000509977 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.83□□□□□ -0.68
RETREG1-205ENST00000509977 MS4A3Q96HJ5 214 aa10.83□□□□□ -0.68
RETREG1-205ENST00000509977 DCBLD2Q96PD2 775 aa10.83□□□□□ -0.68
RETREG1-205ENST00000509977 SLC26A8Q96RN1 970 aa10.83□□□□□ -0.68
RETREG1-205ENST00000509977 TBX22Q9Y458 520 aa10.83□□□□□ -0.68
RETREG1-205ENST00000509977 KIF1BO60333 1816 aa10.83□□□□□ -0.68
RETREG1-205ENST00000509977 NCOA3Q9Y6Q9 1424 aa10.83□□□□□ -0.68
RETREG1-205ENST00000509977 HSPA1LP34931 641 aa10.82□□□□□ -0.68
RETREG1-205ENST00000509977 HDGFP51858 240 aaKnown RBP10.82□□□□□ -0.68
RETREG1-205ENST00000509977 SPOCK2Q92563 424 aa10.82□□□□□ -0.68
RETREG1-205ENST00000509977 SETD1AO15047 1707 aaKnown RBP10.81□□□□□ -0.68
RETREG1-205ENST00000509977 POTEIP0CG38 1075 aa10.81□□□□□ -0.68
RETREG1-205ENST00000509977 FAM135BQ49AJ0 1406 aa10.81□□□□□ -0.68
RETREG1-205ENST00000509977 MED1Q15648 1581 aaPredicted RBP10.81□□□□□ -0.68
RETREG1-205ENST00000509977 MAP3K13O43283 966 aa10.8□□□□□ -0.68
RETREG1-205ENST00000509977 ROBO1Q9Y6N7 1651 aa10.79□□□□□ -0.68
RETREG1-205ENST00000509977 PTPRUQ92729 1446 aa10.79□□□□□ -0.68
RETREG1-205ENST00000509977 PIP4K2BP78356 416 aa10.79□□□□□ -0.68
RETREG1-205ENST00000509977 PPLO60437 1756 aa10.79□□□□□ -0.68
RETREG1-205ENST00000509977 DISP3Q9P2K9 1392 aa10.78□□□□□ -0.68
RETREG1-205ENST00000509977 PRAG1Q86YV5 1406 aa10.78□□□□□ -0.68
RETREG1-205ENST00000509977 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.78□□□□□ -0.68
RETREG1-205ENST00000509977 PPP1R15AO75807 674 aaPredicted RBP10.77□□□□□ -0.69
RETREG1-205ENST00000509977 GSE1Q14687 1217 aa10.77□□□□□ -0.69
RETREG1-205ENST00000509977 IFT172Q9UG01 1749 aa10.77□□□□□ -0.69
RETREG1-205ENST00000509977 CHGAP10645 457 aaKnown RBP10.76□□□□□ -0.69
RETREG1-205ENST00000509977 ILDR2Q71H61 639 aa10.76□□□□□ -0.69
RETREG1-205ENST00000509977 PROSER2Q86WR7 435 aaPredicted RBP10.76□□□□□ -0.69
RETREG1-205ENST00000509977 PYGBP11216 843 aa10.75□□□□□ -0.69
RETREG1-205ENST00000509977 METP08581 1390 aa10.75□□□□□ -0.69
RETREG1-205ENST00000509977 MSH6P52701 1360 aa10.75□□□□□ -0.69
RETREG1-205ENST00000509977 DCCP43146 1447 aa10.75□□□□□ -0.69
RETREG1-205ENST00000509977 SPATA31E1Q6ZUB1 1445 aa10.75□□□□□ -0.69
RETREG1-205ENST00000509977 NUTM2DQ5VT03 806 aaPredicted RBP10.74□□□□□ -0.69
RETREG1-205ENST00000509977 PCDHB13Q9Y5F0 798 aa10.74□□□□□ -0.69
RETREG1-205ENST00000509977 COL16A1Q07092 1604 aaPredicted RBP10.73□□□□□ -0.69
RETREG1-205ENST00000509977 RBM33Q96EV2 1170 aaKnown RBP10.73□□□□□ -0.69
RETREG1-205ENST00000509977 RPGRIP1LQ68CZ1 1315 aa10.73□□□□□ -0.69
RETREG1-205ENST00000509977 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
RETREG1-205ENST00000509977 AHDC1Q5TGY3 1603 aaPredicted RBP10.73□□□□□ -0.69
RETREG1-205ENST00000509977 NALCNQ8IZF0 1738 aa10.72□□□□□ -0.69
RETREG1-205ENST00000509977 SGIP1Q9BQI5 828 aa10.72□□□□□ -0.69
RETREG1-205ENST00000509977 CIZ1Q9ULV3 898 aaPredicted RBP10.72□□□□□ -0.69
RETREG1-205ENST00000509977 PHLPP1O60346 1717 aa10.72□□□□□ -0.69
RETREG1-205ENST00000509977 PTCH1Q13635 1447 aa10.71□□□□□ -0.69
RETREG1-205ENST00000509977 TRIM52Q96A61 297 aa10.71□□□□□ -0.69
RETREG1-205ENST00000509977 BCANQ96GW7 911 aa10.71□□□□□ -0.69
RETREG1-205ENST00000509977 SETD5Q9C0A6 1442 aa10.71□□□□□ -0.69
RETREG1-205ENST00000509977 SLAIN2Q9P270 581 aa10.71□□□□□ -0.69
RETREG1-205ENST00000509977 TRPC6Q9Y210 931 aa10.71□□□□□ -0.69
RETREG1-205ENST00000509977 AMOTL2Q9Y2J4 779 aa10.71□□□□□ -0.69
RETREG1-205ENST00000509977 MPHOSPH9Q99550 1183 aa10.7□□□□□ -0.7
RETREG1-205ENST00000509977 C19orf44Q9H6X5 657 aa10.7□□□□□ -0.7
RETREG1-205ENST00000509977 LAMC1P11047 1609 aa10.69□□□□□ -0.7
RETREG1-205ENST00000509977 NHSL1Q5SYE7 1610 aa10.69□□□□□ -0.7
RETREG1-205ENST00000509977 CCDC144AA2RUR9 1427 aa10.69□□□□□ -0.7
RETREG1-205ENST00000509977 ADGRL3Q9HAR2 1447 aa10.69□□□□□ -0.7
RETREG1-205ENST00000509977 VGFO15240 615 aaPredicted RBP10.69□□□□□ -0.7
RETREG1-205ENST00000509977 ZNF326Q5BKZ1 582 aaKnown RBP10.69□□□□□ -0.7
RETREG1-205ENST00000509977 IFNL1Q8IU54 200 aa10.69□□□□□ -0.7
RETREG1-205ENST00000509977 MST1RQ04912 1400 aa10.68□□□□□ -0.7
RETREG1-205ENST00000509977 KNDC1Q76NI1 1749 aa10.68□□□□□ -0.7
RETREG1-205ENST00000509977 ASTLQ6HA08 431 aaPredicted RBP10.68□□□□□ -0.7
RETREG1-205ENST00000509977 CADPS2Q86UW7 1296 aa10.68□□□□□ -0.7
RETREG1-205ENST00000509977 SHPRHQ149N8 1683 aa10.68□□□□□ -0.7
RETREG1-205ENST00000509977 ASXL1Q8IXJ9 1541 aa10.68□□□□□ -0.7
RETREG1-205ENST00000509977 NRXN1Q9ULB1 1477 aa10.68□□□□□ -0.7
RETREG1-205ENST00000509977 RAB3GAP2Q9H2M9 1393 aa10.67□□□□□ -0.7
RETREG1-205ENST00000509977 SOCS7O14512 581 aa10.67□□□□□ -0.7
RETREG1-205ENST00000509977 ATMINO43313 823 aaPredicted RBP10.67□□□□□ -0.7
RETREG1-205ENST00000509977 TECPR2O15040 1411 aa10.67□□□□□ -0.7
RETREG1-205ENST00000509977 PIK3C2GO75747 1445 aa10.67□□□□□ -0.7
RETREG1-205ENST00000509977 ANKRD30BQ9BXX2 1392 aa10.66□□□□□ -0.7
RETREG1-205ENST00000509977 BMP2KQ9NSY1 1161 aaPredicted RBP10.66□□□□□ -0.7
RETREG1-205ENST00000509977 MYOM2P54296 1465 aa10.66□□□□□ -0.7
RETREG1-205ENST00000509977 ROBO2Q9HCK4 1378 aa10.65□□□□□ -0.7
RETREG1-205ENST00000509977 HRCP23327 699 aa10.65□□□□□ -0.7
RETREG1-205ENST00000509977 TIE1P35590 1138 aa10.65□□□□□ -0.7
RETREG1-205ENST00000509977 ADGRF5Q8IZF2 1346 aa10.64□□□□□ -0.71
RETREG1-205ENST00000509977 PELP1Q8IZL8 1130 aaKnown RBP10.64□□□□□ -0.71
RETREG1-205ENST00000509977 RGS17Q9UGC6 210 aaPredicted RBP10.64□□□□□ -0.71
RETREG1-205ENST00000509977 CDC42BPGQ6DT37 1551 aa10.64□□□□□ -0.71
RETREG1-205ENST00000509977 JCADQ9P266 1359 aa10.64□□□□□ -0.71
RETREG1-205ENST00000509977 CHRM1P11229 460 aaPredicted RBP10.63□□□□□ -0.71
RETREG1-205ENST00000509977 ATF3P18847 181 aa10.63□□□□□ -0.71
RETREG1-205ENST00000509977 ATN1P54259 1190 aaPredicted RBP10.63□□□□□ -0.71
RETREG1-205ENST00000509977 BRINP3Q76B58 766 aa10.63□□□□□ -0.71
RETREG1-205ENST00000509977 PCDHB8Q9UN66 801 aa10.63□□□□□ -0.71
RETREG1-205ENST00000509977 LRP6O75581 1613 aa10.62□□□□□ -0.71
RETREG1-205ENST00000509977 C1orf167Q5SNV9 1468 aa10.61□□□□□ -0.71
RETREG1-205ENST00000509977 TTLL13PA6NNM8 815 aa10.61□□□□□ -0.71
RETREG1-205ENST00000509977 C14orf37Q86TY3 774 aa10.61□□□□□ -0.71
RETREG1-205ENST00000509977 LRPPRCP42704 1394 aaKnown RBP10.61□□□□□ -0.71
RETREG1-205ENST00000509977 ABCC11Q96J66 1382 aa10.61□□□□□ -0.71
RETREG1-205ENST00000509977 SPATA31A6Q5VVP1 1343 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms