RNA–Protein interactions for RNA: ENST00000509176.5

CCSER1-209, Transcript of coiled-coil serine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCSER1, Length 5,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-209ENST00000509176 RALYLQ86SE5 291 aaKnown RBP13.44□□□□□ -0.26
CCSER1-209ENST00000509176 CNNM1Q9NRU3 951 aa13.44□□□□□ -0.26
CCSER1-209ENST00000509176 KDM4AO75164 1064 aa13.44□□□□□ -0.26
CCSER1-209ENST00000509176 WWC2Q6AWC2 1192 aa13.44□□□□□ -0.26
CCSER1-209ENST00000509176 PAF1Q8N7H5 531 aa13.44□□□□□ -0.26
CCSER1-209ENST00000509176 POGZQ7Z3K3 1410 aa13.44□□□□□ -0.26
CCSER1-209ENST00000509176 GNAI1P63096 354 aa13.43□□□□□ -0.26
CCSER1-209ENST00000509176 PRAM1Q96QH2 718 aa13.43□□□□□ -0.26
CCSER1-209ENST00000509176 RNF20Q5VTR2 975 aa13.43□□□□□ -0.26
CCSER1-209ENST00000509176 USP47Q96K76 1375 aa13.43□□□□□ -0.26
CCSER1-209ENST00000509176 FGD5Q6ZNL6 1462 aa13.43□□□□□ -0.26
CCSER1-209ENST00000509176 PRG4Q92954 1404 aaPredicted RBP13.43□□□□□ -0.26
CCSER1-209ENST00000509176 TBC1D2BQ9UPU7 963 aa13.42□□□□□ -0.26
CCSER1-209ENST00000509176 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.42□□□□□ -0.26
CCSER1-209ENST00000509176 TPM1P09493 284 aa13.42□□□□□ -0.26
CCSER1-209ENST00000509176 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
CCSER1-209ENST00000509176 UBTFL1P0CB47 393 aaPredicted RBP13.42□□□□□ -0.26
CCSER1-209ENST00000509176 ZC3H6P61129 1189 aaKnown RBP13.41□□□□□ -0.26
CCSER1-209ENST00000509176 ERC2O15083 957 aa13.4□□□□□ -0.26
CCSER1-209ENST00000509176 SAFBQ15424 915 aaKnown RBP eCLIP13.4□□□□□ -0.26
CCSER1-209ENST00000509176 BECN2A8MW95 431 aa13.4□□□□□ -0.26
CCSER1-209ENST00000509176 GAS2L2Q8NHY3 880 aa13.4□□□□□ -0.26
CCSER1-209ENST00000509176 NGLY1Q96IV0 654 aa13.4□□□□□ -0.26
CCSER1-209ENST00000509176 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
CCSER1-209ENST00000509176 MYOM3Q5VTT5 1437 aa13.4□□□□□ -0.27
CCSER1-209ENST00000509176 ZSCAN29Q8IWY8 852 aaPredicted RBP13.4□□□□□ -0.27
CCSER1-209ENST00000509176 ROCK1Q13464 1354 aa13.39□□□□□ -0.27
CCSER1-209ENST00000509176 GNL3LQ9NVN8 582 aaKnown RBP13.39□□□□□ -0.27
CCSER1-209ENST00000509176 GOLGA6L19H0YKK7 550 aa13.39□□□□□ -0.27
CCSER1-209ENST00000509176 IBSPP21815 317 aaPredicted RBP13.39□□□□□ -0.27
CCSER1-209ENST00000509176 CFAP70Q5T0N1 1121 aa13.39□□□□□ -0.27
CCSER1-209ENST00000509176 RUNDC1Q96C34 613 aa13.39□□□□□ -0.27
CCSER1-209ENST00000509176 DNAJC2Q99543 621 aaKnown RBP13.39□□□□□ -0.27
CCSER1-209ENST00000509176 DDX19BQ9UMR2 479 aa13.39□□□□□ -0.27
CCSER1-209ENST00000509176 RRP12Q5JTH9 1297 aaKnown RBP13.38□□□□□ -0.27
CCSER1-209ENST00000509176 ATP6V1DQ9Y5K8 247 aa13.38□□□□□ -0.27
CCSER1-209ENST00000509176 PHF14O94880 888 aa13.38□□□□□ -0.27
CCSER1-209ENST00000509176 CT47A1Q5JQC4 288 aaPredicted RBP13.38□□□□□ -0.27
CCSER1-209ENST00000509176 ARID3AQ99856 593 aa13.38□□□□□ -0.27
CCSER1-209ENST00000509176 GOLGA6L1Q8N7Z2 621 aa13.38□□□□□ -0.27
CCSER1-209ENST00000509176 DZIP1LQ8IYY4 767 aaKnown RBP13.37□□□□□ -0.27
CCSER1-209ENST00000509176 SLC3A2P08195 630 aaKnown RBP13.37□□□□□ -0.27
CCSER1-209ENST00000509176 ZNF530Q6P9A1 599 aaPredicted RBP13.37□□□□□ -0.27
CCSER1-209ENST00000509176 STK11IPQ8N1F8 1099 aa13.37□□□□□ -0.27
CCSER1-209ENST00000509176 ANKRD20A12PQ8NF67 263 aa13.37□□□□□ -0.27
CCSER1-209ENST00000509176 MTHFSP49914 203 aa13.37□□□□□ -0.27
CCSER1-209ENST00000509176 ODF2Q5BJF6 829 aa13.37□□□□□ -0.27
CCSER1-209ENST00000509176 MYL6BP14649 208 aa13.37□□□□□ -0.27
CCSER1-209ENST00000509176 CCDC30Q5VVM6 783 aa13.37□□□□□ -0.27
CCSER1-209ENST00000509176 MPHOSPH8Q99549 860 aa13.37□□□□□ -0.27
CCSER1-209ENST00000509176 BRMS1Q9HCU9 246 aa13.37□□□□□ -0.27
CCSER1-209ENST00000509176 REC8O95072 547 aa13.36□□□□□ -0.27
CCSER1-209ENST00000509176 CCAR2Q8N163 923 aaKnown RBP13.36□□□□□ -0.27
CCSER1-209ENST00000509176 SCAPERQ9BY12 1400 aa13.36□□□□□ -0.27
CCSER1-209ENST00000509176 ZFYVE27Q5T4F4 411 aa13.36□□□□□ -0.27
CCSER1-209ENST00000509176 IPO7O95373 1038 aaKnown RBP13.35□□□□□ -0.27
CCSER1-209ENST00000509176 FSD1Q9BTV5 496 aa13.35□□□□□ -0.27
CCSER1-209ENST00000509176 FAM161AQ3B820 660 aa13.35□□□□□ -0.27
CCSER1-209ENST00000509176 TTC39AQ5SRH9 613 aa13.35□□□□□ -0.27
CCSER1-209ENST00000509176 CDK19Q9BWU1 502 aa13.35□□□□□ -0.27
CCSER1-209ENST00000509176 SART3Q15020 963 aaKnown RBP13.35□□□□□ -0.27
CCSER1-209ENST00000509176 HOOK1Q9UJC3 728 aaKnown RBP13.34□□□□□ -0.27
CCSER1-209ENST00000509176 TTLL12Q14166 644 aaPredicted RBP13.34□□□□□ -0.27
CCSER1-209ENST00000509176 SYNJ2O15056 1496 aa13.34□□□□□ -0.27
CCSER1-209ENST00000509176 WDHD1O75717 1129 aaPredicted RBP13.34□□□□□ -0.27
CCSER1-209ENST00000509176 XBP1P17861 261 aa13.34□□□□□ -0.27
CCSER1-209ENST00000509176 VPS37CA5D8V6 355 aaPredicted RBP13.34□□□□□ -0.27
CCSER1-209ENST00000509176 BICD2Q8TD16 824 aa13.34□□□□□ -0.27
CCSER1-209ENST00000509176 SMARCA4P51532 1647 aa13.34□□□□□ -0.27
CCSER1-209ENST00000509176 ZNF219Q9P2Y4 722 aaPredicted RBP13.33□□□□□ -0.27
CCSER1-209ENST00000509176 EPS15P42566 896 aa13.33□□□□□ -0.28
CCSER1-209ENST00000509176 CABP1Q9NZU7 370 aa13.33□□□□□ -0.28
CCSER1-209ENST00000509176 SURF6O75683 361 aaKnown RBP13.32□□□□□ -0.28
CCSER1-209ENST00000509176 CCDC158Q5M9N0 1113 aa13.32□□□□□ -0.28
CCSER1-209ENST00000509176 GRIN2BQ13224 1484 aa13.32□□□□□ -0.28
CCSER1-209ENST00000509176 MYCNP04198 464 aaPredicted RBP13.32□□□□□ -0.28
CCSER1-209ENST00000509176 SULT6B1Q6IMI4 303 aa13.32□□□□□ -0.28
CCSER1-209ENST00000509176 ATP2B1P20020 1258 aa13.32□□□□□ -0.28
CCSER1-209ENST00000509176 HMGB2P26583 209 aaKnown RBP13.32□□□□□ -0.28
CCSER1-209ENST00000509176 PRKAR2BP31323 418 aa13.32□□□□□ -0.28
CCSER1-209ENST00000509176 CLASRPQ8N2M8 674 aaKnown RBP13.32□□□□□ -0.28
CCSER1-209ENST00000509176 STAC3Q96MF2 364 aa13.32□□□□□ -0.28
CCSER1-209ENST00000509176 MPHOSPH10O00566 681 aaKnown RBP13.32□□□□□ -0.28
CCSER1-209ENST00000509176 ZPR1O75312 459 aa13.31□□□□□ -0.28
CCSER1-209ENST00000509176 CRBNQ96SW2 442 aa13.31□□□□□ -0.28
CCSER1-209ENST00000509176 ANKRD50Q9ULJ7 1429 aa13.31□□□□□ -0.28
CCSER1-209ENST00000509176 IGF1RP08069 1367 aa13.31□□□□□ -0.28
CCSER1-209ENST00000509176 CHMP4BP1P59074 171 aa13.31□□□□□ -0.28
CCSER1-209ENST00000509176 TMOD2Q9NZR1 351 aa13.31□□□□□ -0.28
CCSER1-209ENST00000509176 HDGFL1Q5TGJ6 251 aa13.3□□□□□ -0.28
CCSER1-209ENST00000509176 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
CCSER1-209ENST00000509176 NAP1L1P55209 391 aaKnown RBP13.3□□□□□ -0.28
CCSER1-209ENST00000509176 SIL1Q9H173 461 aa13.3□□□□□ -0.28
CCSER1-209ENST00000509176 DMRT2Q9Y5R5 561 aa13.3□□□□□ -0.28
CCSER1-209ENST00000509176 CENPQQ7L2Z9 268 aaPredicted RBP13.29□□□□□ -0.28
CCSER1-209ENST00000509176 CDK5RAP3Q96JB5 506 aa13.29□□□□□ -0.28
CCSER1-209ENST00000509176 CCDC85AQ96PX6 553 aaPredicted RBP13.29□□□□□ -0.28
CCSER1-209ENST00000509176 GOLGA6L3A6NEY3 463 aa13.29□□□□□ -0.28
CCSER1-209ENST00000509176 CCDC57Q2TAC2 916 aa13.29□□□□□ -0.28
CCSER1-209ENST00000509176 LNPKQ9C0E8 428 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms