RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 PLXNC1O60486 1568 aa12.48□□□□□ -0.41
PDGFRA-207ENST00000509092 GTF2F1P35269 517 aaKnown RBP eCLIP12.48□□□□□ -0.41
PDGFRA-207ENST00000509092 PRIMPOLQ96LW4 560 aa12.48□□□□□ -0.41
PDGFRA-207ENST00000509092 ADAMTS8Q9UP79 889 aa12.48□□□□□ -0.41
PDGFRA-207ENST00000509092 KIAA1107Q9UPP5 1409 aa12.48□□□□□ -0.41
PDGFRA-207ENST00000509092 BCAR3O75815 825 aa12.47□□□□□ -0.41
PDGFRA-207ENST00000509092 PDZRN3Q9UPQ7 1066 aa12.47□□□□□ -0.41
PDGFRA-207ENST00000509092 DNMT1P26358 1616 aaKnown RBP12.47□□□□□ -0.41
PDGFRA-207ENST00000509092 PTPRGP23470 1445 aa12.47□□□□□ -0.41
PDGFRA-207ENST00000509092 MFAP1P55081 439 aaKnown RBP12.47□□□□□ -0.41
PDGFRA-207ENST00000509092 DNTTIP2Q5QJE6 756 aaKnown RBP12.47□□□□□ -0.41
PDGFRA-207ENST00000509092 CLEC17AQ6ZS10 378 aa12.47□□□□□ -0.41
PDGFRA-207ENST00000509092 CGNQ9P2M7 1197 aaKnown RBP12.47□□□□□ -0.41
PDGFRA-207ENST00000509092 HMGN5P82970 282 aaKnown RBP12.46□□□□□ -0.41
PDGFRA-207ENST00000509092 DDX49Q9Y6V7 483 aaKnown RBP12.46□□□□□ -0.41
PDGFRA-207ENST00000509092 PLB1Q6P1J6 1458 aa12.45□□□□□ -0.42
PDGFRA-207ENST00000509092 SLC20A2Q08357 652 aa12.45□□□□□ -0.42
PDGFRA-207ENST00000509092 CC2D1BQ5T0F9 858 aaKnown RBP12.45□□□□□ -0.42
PDGFRA-207ENST00000509092 DAPK1P53355 1430 aa12.45□□□□□ -0.42
PDGFRA-207ENST00000509092 RAPGEF6Q8TEU7 1601 aa12.45□□□□□ -0.42
PDGFRA-207ENST00000509092 NBPF1Q3BBV0 1214 aa12.45□□□□□ -0.42
PDGFRA-207ENST00000509092 RBSNQ9H1K0 784 aa12.45□□□□□ -0.42
PDGFRA-207ENST00000509092 KIAA2012Q0VF49 1180 aa12.44□□□□□ -0.42
PDGFRA-207ENST00000509092 WDR43Q15061 677 aaKnown RBP eCLIP12.43□□□□□ -0.42
PDGFRA-207ENST00000509092 COG6Q9Y2V7 657 aa12.43□□□□□ -0.42
PDGFRA-207ENST00000509092 ZBTB22O15209 634 aa12.43□□□□□ -0.42
PDGFRA-207ENST00000509092 FAM135AQ9P2D6 1515 aa12.43□□□□□ -0.42
PDGFRA-207ENST00000509092 ABCA8O94911 1581 aa12.42□□□□□ -0.42
PDGFRA-207ENST00000509092 ZSCAN23Q3MJ62 389 aa12.42□□□□□ -0.42
PDGFRA-207ENST00000509092 TEX2Q8IWB9 1127 aa12.42□□□□□ -0.42
PDGFRA-207ENST00000509092 COL17A1Q9UMD9 1497 aaPredicted RBP12.42□□□□□ -0.42
PDGFRA-207ENST00000509092 IRX5P78411 483 aaPredicted RBP12.42□□□□□ -0.42
PDGFRA-207ENST00000509092 ZNF771Q7L3S4 317 aaPredicted RBP12.41□□□□□ -0.42
PDGFRA-207ENST00000509092 PANK1Q8TE04 598 aa12.41□□□□□ -0.42
PDGFRA-207ENST00000509092 NUP153P49790 1475 aaKnown RBP12.41□□□□□ -0.42
PDGFRA-207ENST00000509092 CAMSAP2Q08AD1 1489 aa12.41□□□□□ -0.42
PDGFRA-207ENST00000509092 E9PSI1 815 aa12.41□□□□□ -0.42
PDGFRA-207ENST00000509092 DNAJC2Q99543 621 aaKnown RBP12.41□□□□□ -0.42
PDGFRA-207ENST00000509092 ABCC2Q92887 1545 aa12.41□□□□□ -0.42
PDGFRA-207ENST00000509092 ARID3CA6NKF2 412 aa12.4□□□□□ -0.42
PDGFRA-207ENST00000509092 BAG4O95429 457 aaKnown RBP12.4□□□□□ -0.42
PDGFRA-207ENST00000509092 CHRM1P11229 460 aaPredicted RBP12.4□□□□□ -0.42
PDGFRA-207ENST00000509092 PDCL2Q8N4E4 241 aa12.4□□□□□ -0.42
PDGFRA-207ENST00000509092 JARID2Q92833 1246 aaPredicted RBP12.4□□□□□ -0.42
PDGFRA-207ENST00000509092 RWDD1Q9H446 243 aaPredicted RBP12.4□□□□□ -0.42
PDGFRA-207ENST00000509092 KIF3AQ9Y496 699 aa12.4□□□□□ -0.42
PDGFRA-207ENST00000509092 AK9Q5TCS8 1911 aa12.4□□□□□ -0.42
PDGFRA-207ENST00000509092 SSFA2P28290 1259 aa12.4□□□□□ -0.42
PDGFRA-207ENST00000509092 TSC1Q92574 1164 aa12.4□□□□□ -0.42
PDGFRA-207ENST00000509092 ZFP91Q96JP5 570 aaPredicted RBP12.4□□□□□ -0.42
PDGFRA-207ENST00000509092 PCDHB15Q9Y5E8 787 aa12.4□□□□□ -0.42
PDGFRA-207ENST00000509092 TRPM1Q7Z4N2 1603 aa12.39□□□□□ -0.43
PDGFRA-207ENST00000509092 ABCC5O15440 1437 aa12.39□□□□□ -0.43
PDGFRA-207ENST00000509092 ADGBQ8N7X0 1667 aa12.39□□□□□ -0.43
PDGFRA-207ENST00000509092 CDK13Q14004 1512 aaKnown RBP12.39□□□□□ -0.43
PDGFRA-207ENST00000509092 SPDYE4A6NLX3 237 aa12.39□□□□□ -0.43
PDGFRA-207ENST00000509092 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
PDGFRA-207ENST00000509092 CAVIN1Q6NZI2 390 aaKnown RBP12.39□□□□□ -0.43
PDGFRA-207ENST00000509092 SPINK5Q9NQ38 1064 aaPredicted RBP12.39□□□□□ -0.43
PDGFRA-207ENST00000509092 IRX3P78415 501 aaPredicted RBP12.38□□□□□ -0.43
PDGFRA-207ENST00000509092 GABPB1Q06547 395 aaPredicted RBP12.38□□□□□ -0.43
PDGFRA-207ENST00000509092 FEZ1Q99689 392 aa12.38□□□□□ -0.43
PDGFRA-207ENST00000509092 BCL2L12Q9HB09 334 aa12.38□□□□□ -0.43
PDGFRA-207ENST00000509092 RIMBP3CA6NJZ7 1639 aa12.37□□□□□ -0.43
PDGFRA-207ENST00000509092 RIMBP3BA6NNM3 1639 aa12.37□□□□□ -0.43
PDGFRA-207ENST00000509092 RIMBP3Q9UFD9 1639 aa12.37□□□□□ -0.43
PDGFRA-207ENST00000509092 LAMC1P11047 1609 aa12.37□□□□□ -0.43
PDGFRA-207ENST00000509092 CCDC66A2RUB6 948 aa12.37□□□□□ -0.43
PDGFRA-207ENST00000509092 KCNJ4P48050 445 aa12.37□□□□□ -0.43
PDGFRA-207ENST00000509092 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.37□□□□□ -0.43
PDGFRA-207ENST00000509092 K7ELQ4 463 aaPredicted RBP12.36□□□□□ -0.43
PDGFRA-207ENST00000509092 IGSF3O75054 1194 aa12.36□□□□□ -0.43
PDGFRA-207ENST00000509092 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
PDGFRA-207ENST00000509092 PIBF1Q8WXW3 757 aa12.36□□□□□ -0.43
PDGFRA-207ENST00000509092 ANKRD7Q92527 254 aa12.36□□□□□ -0.43
PDGFRA-207ENST00000509092 OGFRQ9NZT2 677 aa12.36□□□□□ -0.43
PDGFRA-207ENST00000509092 PTMAP06454 111 aaKnown RBP12.35□□□□□ -0.43
PDGFRA-207ENST00000509092 LRSAM1Q6UWE0 723 aa12.35□□□□□ -0.43
PDGFRA-207ENST00000509092 LMBRD1Q9NUN5 540 aa12.35□□□□□ -0.43
PDGFRA-207ENST00000509092 ITSN2Q9NZM3 1697 aa12.35□□□□□ -0.43
PDGFRA-207ENST00000509092 U2AF2P26368 475 aaKnown RBP eCLIP12.35□□□□□ -0.43
PDGFRA-207ENST00000509092 PPP2R1AP30153 589 aa12.35□□□□□ -0.43
PDGFRA-207ENST00000509092 NGEFQ8N5V2 710 aa12.34□□□□□ -0.43
PDGFRA-207ENST00000509092 ATP10BO94823 1461 aa12.34□□□□□ -0.43
PDGFRA-207ENST00000509092 UHRF1BP1LA0JNW5 1464 aa12.33□□□□□ -0.43
PDGFRA-207ENST00000509092 PKD2Q13563 968 aa12.33□□□□□ -0.43
PDGFRA-207ENST00000509092 MCTP1Q6DN14 999 aa12.33□□□□□ -0.43
PDGFRA-207ENST00000509092 RGS22Q8NE09 1264 aa12.33□□□□□ -0.43
PDGFRA-207ENST00000509092 ADCY10Q96PN6 1610 aa12.33□□□□□ -0.43
PDGFRA-207ENST00000509092 PIK3C2GO75747 1445 aa12.33□□□□□ -0.44
PDGFRA-207ENST00000509092 NOLC1Q14978 699 aaKnown RBP eCLIP12.33□□□□□ -0.44
PDGFRA-207ENST00000509092 TIGD1Q96MW7 591 aa12.33□□□□□ -0.44
PDGFRA-207ENST00000509092 FOXD4L1Q9NU39 408 aa12.33□□□□□ -0.44
PDGFRA-207ENST00000509092 DISP3Q9P2K9 1392 aa12.32□□□□□ -0.44
PDGFRA-207ENST00000509092 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
PDGFRA-207ENST00000509092 FKBP5Q13451 457 aaPredicted RBP12.32□□□□□ -0.44
PDGFRA-207ENST00000509092 SPTLC3Q9NUV7 552 aa12.32□□□□□ -0.44
PDGFRA-207ENST00000509092 FAM177BA6PVY3 158 aa12.31□□□□□ -0.44
PDGFRA-207ENST00000509092 GAS2L2Q8NHY3 880 aa12.31□□□□□ -0.44
PDGFRA-207ENST00000509092 SECISBP2LQ93073 1101 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms