RNA–Protein interactions for RNA: ENST00000507860.1

MATR3-212, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-212ENST00000507860 PDIA4P13667 645 aaKnown RBP10.9□□□□□ -0.66
MATR3-212ENST00000507860 NDUFB9Q9Y6M9 179 aa10.9□□□□□ -0.66
MATR3-212ENST00000507860 ST18O60284 1047 aa10.89□□□□□ -0.67
MATR3-212ENST00000507860 ZNF687Q8N1G0 1237 aa10.89□□□□□ -0.67
MATR3-212ENST00000507860 HMX1Q9NP08 348 aaPredicted RBP10.89□□□□□ -0.67
MATR3-212ENST00000507860 BHMG1C9JSJ3 638 aaPredicted RBP10.88□□□□□ -0.67
MATR3-212ENST00000507860 CFAP99D6REC4 459 aa10.88□□□□□ -0.67
MATR3-212ENST00000507860 CDAN1Q8IWY9 1227 aa10.88□□□□□ -0.67
MATR3-212ENST00000507860 HELBQ8NG08 1087 aaPredicted RBP10.88□□□□□ -0.67
MATR3-212ENST00000507860 CALR3Q96L12 384 aaKnown RBP10.88□□□□□ -0.67
MATR3-212ENST00000507860 C6orf229H3BNL8 230 aa10.87□□□□□ -0.67
MATR3-212ENST00000507860 ATP6V1AP38606 617 aa10.87□□□□□ -0.67
MATR3-212ENST00000507860 EMP3P54852 163 aa10.87□□□□□ -0.67
MATR3-212ENST00000507860 IRF5Q13568 498 aa10.87□□□□□ -0.67
MATR3-212ENST00000507860 TRIM34Q9BYJ4 488 aa10.87□□□□□ -0.67
MATR3-212ENST00000507860 NBPF3Q9H094 633 aa10.87□□□□□ -0.67
MATR3-212ENST00000507860 GLMNQ92990 594 aa10.86□□□□□ -0.67
MATR3-212ENST00000507860 GPR37L1O60883 481 aa10.85□□□□□ -0.67
MATR3-212ENST00000507860 LRRN4Q8WUT4 740 aa10.85□□□□□ -0.67
MATR3-212ENST00000507860 TSC1Q92574 1164 aa10.85□□□□□ -0.67
MATR3-212ENST00000507860 SYMPKQ92797 1274 aaKnown RBP10.85□□□□□ -0.67
MATR3-212ENST00000507860 MARVELD3Q96A59 401 aa10.85□□□□□ -0.67
MATR3-212ENST00000507860 ZFRQ96KR1 1074 aaKnown RBP10.85□□□□□ -0.67
MATR3-212ENST00000507860 RNF40O75150 1001 aa10.84□□□□□ -0.67
MATR3-212ENST00000507860 FAM205CA6NFA0 338 aa10.83□□□□□ -0.68
MATR3-212ENST00000507860 TK2O00142 265 aa10.83□□□□□ -0.68
MATR3-212ENST00000507860 KMT5BQ4FZB7 885 aa10.83□□□□□ -0.68
MATR3-212ENST00000507860 WASHC4Q2M389 1173 aa10.82□□□□□ -0.68
MATR3-212ENST00000507860 PRR7Q8TB68 274 aa10.82□□□□□ -0.68
MATR3-212ENST00000507860 EPS8L1Q8TE68 723 aa10.81□□□□□ -0.68
MATR3-212ENST00000507860 ACTN4O43707 911 aaKnown RBP10.8□□□□□ -0.68
MATR3-212ENST00000507860 MORN1Q5T089 497 aa10.8□□□□□ -0.68
MATR3-212ENST00000507860 HDGFL1Q5TGJ6 251 aa10.8□□□□□ -0.68
MATR3-212ENST00000507860 MRPL50Q8N5N7 158 aaKnown RBP10.8□□□□□ -0.68
MATR3-212ENST00000507860 ADAMTS19Q8TE59 1207 aa10.8□□□□□ -0.68
MATR3-212ENST00000507860 NECTIN2Q92692 538 aa10.79□□□□□ -0.68
MATR3-212ENST00000507860 TRAIPQ9BWF2 469 aa10.79□□□□□ -0.68
MATR3-212ENST00000507860 POTEB3A0JP26 581 aa10.78□□□□□ -0.68
MATR3-212ENST00000507860 PPP1R15AO75807 674 aaPredicted RBP10.78□□□□□ -0.68
MATR3-212ENST00000507860 PUS10Q3MIT2 529 aaKnown RBP10.78□□□□□ -0.68
MATR3-212ENST00000507860 POTEBQ6S5H4 581 aa10.78□□□□□ -0.68
MATR3-212ENST00000507860 RETREG3Q86VR2 466 aa10.78□□□□□ -0.68
MATR3-212ENST00000507860 LRCH3Q96II8 777 aa10.78□□□□□ -0.68
MATR3-212ENST00000507860 SLC27A5Q9Y2P5 690 aa10.78□□□□□ -0.68
MATR3-212ENST00000507860 VAC14Q08AM6 782 aa10.77□□□□□ -0.69
MATR3-212ENST00000507860 HS3ST6Q96QI5 342 aa10.77□□□□□ -0.69
MATR3-212ENST00000507860 PER1O15534 1290 aaPredicted RBP10.76□□□□□ -0.69
MATR3-212ENST00000507860 NR6A1Q15406 480 aa10.76□□□□□ -0.69
MATR3-212ENST00000507860 Q3C1V9 767 aa10.76□□□□□ -0.69
MATR3-212ENST00000507860 ADGRD1Q6QNK2 874 aa10.76□□□□□ -0.69
MATR3-212ENST00000507860 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.76□□□□□ -0.69
MATR3-212ENST00000507860 ZBTB7CA1YPR0 619 aa10.75□□□□□ -0.69
MATR3-212ENST00000507860 DESI1Q6ICB0 168 aa10.75□□□□□ -0.69
MATR3-212ENST00000507860 RETREG2Q8NC44 543 aa10.75□□□□□ -0.69
MATR3-212ENST00000507860 HRO43593 1189 aa10.74□□□□□ -0.69
MATR3-212ENST00000507860 LSM11P83369 360 aaKnown RBP eCLIP10.74□□□□□ -0.69
MATR3-212ENST00000507860 ALG2Q9H553 416 aa10.74□□□□□ -0.69
MATR3-212ENST00000507860 PRR14Q9BWN1 585 aa10.73□□□□□ -0.69
MATR3-212ENST00000507860 ACIN1Q9UKV3 1341 aaKnown RBP10.72□□□□□ -0.69
MATR3-212ENST00000507860 LYPD8Q6UX82 237 aa10.71□□□□□ -0.69
MATR3-212ENST00000507860 RNF19BQ6ZMZ0 732 aa10.71□□□□□ -0.69
MATR3-212ENST00000507860 CFAP70Q5T0N1 1121 aa10.7□□□□□ -0.7
MATR3-212ENST00000507860 BRICD5Q6PL45 260 aa10.7□□□□□ -0.7
MATR3-212ENST00000507860 BLOC1S3Q6QNY0 202 aa10.7□□□□□ -0.7
MATR3-212ENST00000507860 SALL2Q9Y467 1007 aaPredicted RBP10.7□□□□□ -0.7
MATR3-212ENST00000507860 PPP4CP60510 307 aa10.69□□□□□ -0.7
MATR3-212ENST00000507860 ANKK1Q8NFD2 765 aa10.69□□□□□ -0.7
MATR3-212ENST00000507860 PBXIP1Q96AQ6 731 aa10.69□□□□□ -0.7
MATR3-212ENST00000507860 PPP1R12CQ9BZL4 782 aa10.69□□□□□ -0.7
MATR3-212ENST00000507860 SOWAHBA6NEL2 793 aa10.68□□□□□ -0.7
MATR3-212ENST00000507860 RFX1P22670 979 aa10.68□□□□□ -0.7
MATR3-212ENST00000507860 SOX11P35716 441 aa10.68□□□□□ -0.7
MATR3-212ENST00000507860 KCTD17Q8N5Z5 321 aa10.68□□□□□ -0.7
MATR3-212ENST00000507860 USB1Q9BQ65 265 aaKnown RBP10.68□□□□□ -0.7
MATR3-212ENST00000507860 GOLGA8CPA6NN73 597 aa10.67□□□□□ -0.7
MATR3-212ENST00000507860 APLP1P51693 650 aa10.67□□□□□ -0.7
MATR3-212ENST00000507860 SRPK2P78362 688 aaKnown RBP10.67□□□□□ -0.7
MATR3-212ENST00000507860 SCUBE3Q8IX30 993 aa10.67□□□□□ -0.7
MATR3-212ENST00000507860 HPS5Q9UPZ3 1129 aa10.67□□□□□ -0.7
MATR3-212ENST00000507860 PNMA1Q8ND90 353 aa10.66□□□□□ -0.7
MATR3-212ENST00000507860 THAP11Q96EK4 314 aa10.66□□□□□ -0.7
MATR3-212ENST00000507860 STAC3Q96MF2 364 aa10.66□□□□□ -0.7
MATR3-212ENST00000507860 TSR3Q9UJK0 312 aaKnown RBP10.66□□□□□ -0.7
MATR3-212ENST00000507860 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.65□□□□□ -0.7
MATR3-212ENST00000507860 PALM3A6NDB9 673 aaPredicted RBP10.65□□□□□ -0.7
MATR3-212ENST00000507860 BCAMP50895 628 aa10.65□□□□□ -0.7
MATR3-212ENST00000507860 SEMA3FQ13275 785 aa10.65□□□□□ -0.7
MATR3-212ENST00000507860 UCN2Q96RP3 112 aa10.65□□□□□ -0.7
MATR3-212ENST00000507860 FMNL1O95466 1100 aaPredicted RBP10.64□□□□□ -0.71
MATR3-212ENST00000507860 SPNS2Q8IVW8 549 aa10.64□□□□□ -0.71
MATR3-212ENST00000507860 PCDHB3Q9Y5E6 796 aa10.64□□□□□ -0.71
MATR3-212ENST00000507860 NR1I2O75469 434 aa10.63□□□□□ -0.71
MATR3-212ENST00000507860 PDE4CQ08493 712 aa10.63□□□□□ -0.71
MATR3-212ENST00000507860 MMRN1Q13201 1228 aa10.63□□□□□ -0.71
MATR3-212ENST00000507860 ANKRD13DQ6ZTN6 518 aa10.63□□□□□ -0.71
MATR3-212ENST00000507860 AEBP1Q8IUX7 1158 aa10.63□□□□□ -0.71
MATR3-212ENST00000507860 TFIP11Q9UBB9 837 aaKnown RBP10.63□□□□□ -0.71
MATR3-212ENST00000507860 F12P00748 615 aaPredicted RBP10.62□□□□□ -0.71
MATR3-212ENST00000507860 JUNDP17535 347 aa10.62□□□□□ -0.71
MATR3-212ENST00000507860 LMOD1P29536 600 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms