RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 PPARGC1BQ86YN6 1023 aaKnown RBP13.82□□□□□ -0.2
PTPN20-215ENST00000505814 OCEL1Q9H607 264 aa13.82□□□□□ -0.2
PTPN20-215ENST00000505814 IQSEC2Q5JU85 1478 aa13.81□□□□□ -0.2
PTPN20-215ENST00000505814 GOLGA2Q08379 1002 aa13.8□□□□□ -0.2
PTPN20-215ENST00000505814 PKD2Q13563 968 aa13.8□□□□□ -0.2
PTPN20-215ENST00000505814 TMEM131LA2VDJ0 1609 aa13.79□□□□□ -0.2
PTPN20-215ENST00000505814 IQGAP1P46940 1657 aa13.79□□□□□ -0.2
PTPN20-215ENST00000505814 PDAP1Q13442 181 aaKnown RBP13.79□□□□□ -0.2
PTPN20-215ENST00000505814 SPHKAPQ2M3C7 1700 aa13.78□□□□□ -0.2
PTPN20-215ENST00000505814 MKRN3Q13064 507 aaKnown RBP13.77□□□□□ -0.21
PTPN20-215ENST00000505814 CFAP65Q6ZU64 1925 aaKnown RBP13.77□□□□□ -0.21
PTPN20-215ENST00000505814 SCAF11Q99590 1463 aaKnown RBP13.76□□□□□ -0.21
PTPN20-215ENST00000505814 ZFYVE9O95405 1425 aa13.76□□□□□ -0.21
PTPN20-215ENST00000505814 TRPM2O94759 1503 aa13.75□□□□□ -0.21
PTPN20-215ENST00000505814 NCKAP5LQ9HCH0 1330 aa13.75□□□□□ -0.21
PTPN20-215ENST00000505814 NPHP4O75161 1426 aaPredicted RBP13.74□□□□□ -0.21
PTPN20-215ENST00000505814 TMEM2Q9UHN6 1383 aa13.74□□□□□ -0.21
PTPN20-215ENST00000505814 MYO5BQ9ULV0 1848 aa13.74□□□□□ -0.21
PTPN20-215ENST00000505814 STRCP1A6NGW2 1772 aa13.74□□□□□ -0.21
PTPN20-215ENST00000505814 THEMISQ8N1K5 641 aaPredicted RBP13.74□□□□□ -0.21
PTPN20-215ENST00000505814 NUP155O75694 1391 aa13.72□□□□□ -0.21
PTPN20-215ENST00000505814 CPS1P31327 1500 aa13.72□□□□□ -0.21
PTPN20-215ENST00000505814 IDI1Q13907 227 aa13.71□□□□□ -0.21
PTPN20-215ENST00000505814 SLC52A1Q9NWF4 448 aa13.71□□□□□ -0.21
PTPN20-215ENST00000505814 CLTCL1P53675 1640 aa13.71□□□□□ -0.22
PTPN20-215ENST00000505814 NWD1Q149M9 1564 aa13.71□□□□□ -0.22
PTPN20-215ENST00000505814 ALKQ9UM73 1620 aa13.69□□□□□ -0.22
PTPN20-215ENST00000505814 ZNF335Q9H4Z2 1342 aaPredicted RBP13.68□□□□□ -0.22
PTPN20-215ENST00000505814 ITGAEP38570 1179 aa13.68□□□□□ -0.22
PTPN20-215ENST00000505814 ANKLE2Q86XL3 938 aa13.68□□□□□ -0.22
PTPN20-215ENST00000505814 LTKP29376 864 aa13.67□□□□□ -0.22
PTPN20-215ENST00000505814 FAM163AQ96GL9 167 aaPredicted RBP13.67□□□□□ -0.22
PTPN20-215ENST00000505814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.22
PTPN20-215ENST00000505814 NRXN3Q9Y4C0 1643 aa13.66□□□□□ -0.22
PTPN20-215ENST00000505814 SLAIN1Q8ND83 568 aa13.66□□□□□ -0.22
PTPN20-215ENST00000505814 DIP2AQ14689 1571 aa13.66□□□□□ -0.22
PTPN20-215ENST00000505814 XIRP1Q702N8 1843 aaKnown RBP13.65□□□□□ -0.22
PTPN20-215ENST00000505814 PDCD7Q8N8D1 485 aaKnown RBP13.65□□□□□ -0.22
PTPN20-215ENST00000505814 CABP2Q9NPB3 220 aa13.65□□□□□ -0.22
PTPN20-215ENST00000505814 NEXMIFQ5QGS0 1516 aa13.64□□□□□ -0.23
PTPN20-215ENST00000505814 SETBP1Q9Y6X0 1596 aa13.64□□□□□ -0.23
PTPN20-215ENST00000505814 PLEKHG1Q9ULL1 1385 aa13.63□□□□□ -0.23
PTPN20-215ENST00000505814 POTEMA6NI47 508 aa13.63□□□□□ -0.23
PTPN20-215ENST00000505814 LRRC7Q96NW7 1537 aa13.63□□□□□ -0.23
PTPN20-215ENST00000505814 RIMS2Q9UQ26 1411 aa13.63□□□□□ -0.23
PTPN20-215ENST00000505814 L3MBTL3Q96JM7 780 aaPredicted RBP13.62□□□□□ -0.23
PTPN20-215ENST00000505814 ADAMTS13Q76LX8 1427 aa13.62□□□□□ -0.23
PTPN20-215ENST00000505814 SETD1AO15047 1707 aaKnown RBP13.61□□□□□ -0.23
PTPN20-215ENST00000505814 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
PTPN20-215ENST00000505814 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.61□□□□□ -0.23
PTPN20-215ENST00000505814 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
PTPN20-215ENST00000505814 CHD2O14647 1828 aaKnown RBP13.6□□□□□ -0.23
PTPN20-215ENST00000505814 SETD5Q9C0A6 1442 aa13.6□□□□□ -0.23
PTPN20-215ENST00000505814 IFT172Q9UG01 1749 aa13.6□□□□□ -0.23
PTPN20-215ENST00000505814 KIF1BO60333 1816 aa13.6□□□□□ -0.23
PTPN20-215ENST00000505814 RIOK3O14730 519 aaKnown RBP13.59□□□□□ -0.23
PTPN20-215ENST00000505814 TXNDC2Q86VQ3 553 aa13.59□□□□□ -0.23
PTPN20-215ENST00000505814 XRN1Q8IZH2 1706 aaKnown RBP13.59□□□□□ -0.23
PTPN20-215ENST00000505814 PPLO60437 1756 aa13.58□□□□□ -0.24
PTPN20-215ENST00000505814 SPATA31E1Q6ZUB1 1445 aa13.57□□□□□ -0.24
PTPN20-215ENST00000505814 PRAG1Q86YV5 1406 aa13.57□□□□□ -0.24
PTPN20-215ENST00000505814 ACIN1Q9UKV3 1341 aaKnown RBP13.57□□□□□ -0.24
PTPN20-215ENST00000505814 RAB3GAP2Q9H2M9 1393 aa13.56□□□□□ -0.24
PTPN20-215ENST00000505814 LCE2DQ5TA82 110 aaPredicted RBP13.55□□□□□ -0.24
PTPN20-215ENST00000505814 RNF25Q96BH1 459 aaPredicted RBP13.55□□□□□ -0.24
PTPN20-215ENST00000505814 EID1Q9Y6B2 187 aa13.55□□□□□ -0.24
PTPN20-215ENST00000505814 PIK3R4Q99570 1358 aa13.55□□□□□ -0.24
PTPN20-215ENST00000505814 C3orf67Q6ZVT6 689 aa13.54□□□□□ -0.24
PTPN20-215ENST00000505814 VGFO15240 615 aaPredicted RBP13.53□□□□□ -0.24
PTPN20-215ENST00000505814 HRCP23327 699 aa13.52□□□□□ -0.25
PTPN20-215ENST00000505814 PTPRUQ92729 1446 aa13.51□□□□□ -0.25
PTPN20-215ENST00000505814 UBAP1LF5GYI3 381 aa13.51□□□□□ -0.25
PTPN20-215ENST00000505814 DPY19L2Q6NUT2 758 aa13.51□□□□□ -0.25
PTPN20-215ENST00000505814 EFCAB3Q8N7B9 438 aa13.51□□□□□ -0.25
PTPN20-215ENST00000505814 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN20-215ENST00000505814 MPHOSPH9Q99550 1183 aa13.5□□□□□ -0.25
PTPN20-215ENST00000505814 TBX22Q9Y458 520 aa13.5□□□□□ -0.25
PTPN20-215ENST00000505814 NRXN1Q9ULB1 1477 aa13.49□□□□□ -0.25
PTPN20-215ENST00000505814 NCOA3Q9Y6Q9 1424 aa13.49□□□□□ -0.25
PTPN20-215ENST00000505814 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.49□□□□□ -0.25
PTPN20-215ENST00000505814 KCNA6P17658 529 aa13.49□□□□□ -0.25
PTPN20-215ENST00000505814 ZFP91Q96JP5 570 aaPredicted RBP13.49□□□□□ -0.25
PTPN20-215ENST00000505814 G3V3G9 751 aa13.48□□□□□ -0.25
PTPN20-215ENST00000505814 TAOK2Q9UL54 1235 aa13.48□□□□□ -0.25
PTPN20-215ENST00000505814 ASXL1Q8IXJ9 1541 aa13.48□□□□□ -0.25
PTPN20-215ENST00000505814 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
PTPN20-215ENST00000505814 SNPHO15079 494 aa13.47□□□□□ -0.25
PTPN20-215ENST00000505814 PCDH10Q9P2E7 1040 aa13.47□□□□□ -0.25
PTPN20-215ENST00000505814 MYOM2P54296 1465 aa13.47□□□□□ -0.25
PTPN20-215ENST00000505814 TMEM94Q12767 1356 aa13.46□□□□□ -0.25
PTPN20-215ENST00000505814 ANKRD30BQ9BXX2 1392 aa13.46□□□□□ -0.25
PTPN20-215ENST00000505814 TRIM52Q96A61 297 aa13.46□□□□□ -0.25
PTPN20-215ENST00000505814 SLC26A8Q96RN1 970 aa13.46□□□□□ -0.25
PTPN20-215ENST00000505814 RPGRIP1LQ68CZ1 1315 aa13.45□□□□□ -0.26
PTPN20-215ENST00000505814 HDGFP51858 240 aaKnown RBP13.45□□□□□ -0.26
PTPN20-215ENST00000505814 BOLA1Q9Y3E2 137 aa13.45□□□□□ -0.26
PTPN20-215ENST00000505814 PIK3C2GO75747 1445 aa13.45□□□□□ -0.26
PTPN20-215ENST00000505814 PTCH1Q13635 1447 aa13.45□□□□□ -0.26
PTPN20-215ENST00000505814 KNDC1Q76NI1 1749 aa13.44□□□□□ -0.26
PTPN20-215ENST00000505814 ECM2O94769 699 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms