RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 VSIG10Q8N0Z9 540 aa10.47□□□□□ -0.73
SSBP2-204ENST00000504985 CENPBP07199 599 aaPredicted RBP10.46□□□□□ -0.74
SSBP2-204ENST00000504985 SPSB2Q99619 263 aa10.46□□□□□ -0.74
SSBP2-204ENST00000504985 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.74
SSBP2-204ENST00000504985 SYNJ1O43426 1573 aa10.46□□□□□ -0.74
SSBP2-204ENST00000504985 ATP6V1AP38606 617 aa10.45□□□□□ -0.74
SSBP2-204ENST00000504985 FUT2Q10981 343 aa10.45□□□□□ -0.74
SSBP2-204ENST00000504985 NESP48681 1621 aa10.45□□□□□ -0.74
SSBP2-204ENST00000504985 LAMC3Q9Y6N6 1575 aa10.44□□□□□ -0.74
SSBP2-204ENST00000504985 DDX11L8A8MPP1 907 aa10.44□□□□□ -0.74
SSBP2-204ENST00000504985 GDF9O60383 454 aa10.44□□□□□ -0.74
SSBP2-204ENST00000504985 SULF1Q8IWU6 871 aa10.44□□□□□ -0.74
SSBP2-204ENST00000504985 WRNQ14191 1432 aaPredicted RBP eCLIP10.44□□□□□ -0.74
SSBP2-204ENST00000504985 ERCC6Q03468 1493 aa10.44□□□□□ -0.74
SSBP2-204ENST00000504985 RDH13Q8NBN7 331 aa10.43□□□□□ -0.74
SSBP2-204ENST00000504985 FAM160A2Q8N612 972 aaPredicted RBP10.42□□□□□ -0.74
SSBP2-204ENST00000504985 BIVM-ERCC5R4GMW8 1640 aa10.42□□□□□ -0.74
SSBP2-204ENST00000504985 MAP2K5Q13163 448 aa10.41□□□□□ -0.74
SSBP2-204ENST00000504985 SLC27A5Q9Y2P5 690 aa10.41□□□□□ -0.74
SSBP2-204ENST00000504985 TOP2BQ02880 1626 aa10.4□□□□□ -0.74
SSBP2-204ENST00000504985 BRICD5Q6PL45 260 aa10.4□□□□□ -0.74
SSBP2-204ENST00000504985 CUX1P39880 1505 aa10.4□□□□□ -0.75
SSBP2-204ENST00000504985 IRF6O14896 467 aa10.39□□□□□ -0.75
SSBP2-204ENST00000504985 CD46P15529 392 aa10.39□□□□□ -0.75
SSBP2-204ENST00000504985 ZNF697Q5TEC3 545 aa10.39□□□□□ -0.75
SSBP2-204ENST00000504985 FANCD2Q9BXW9 1451 aa10.39□□□□□ -0.75
SSBP2-204ENST00000504985 DGAT1O75907 488 aa10.38□□□□□ -0.75
SSBP2-204ENST00000504985 MINK1Q8N4C8 1332 aaPredicted RBP10.37□□□□□ -0.75
SSBP2-204ENST00000504985 FMNL1O95466 1100 aaPredicted RBP10.37□□□□□ -0.75
SSBP2-204ENST00000504985 RPIAP49247 311 aa10.37□□□□□ -0.75
SSBP2-204ENST00000504985 KIF21AQ7Z4S6 1674 aa10.36□□□□□ -0.75
SSBP2-204ENST00000504985 PKD2L1Q9P0L9 805 aa10.36□□□□□ -0.75
SSBP2-204ENST00000504985 MSS51Q4VC12 460 aa10.35□□□□□ -0.75
SSBP2-204ENST00000504985 LMOD2Q6P5Q4 547 aa10.35□□□□□ -0.75
SSBP2-204ENST00000504985 CEP164Q9UPV0 1460 aa10.33□□□□□ -0.76
SSBP2-204ENST00000504985 RNF19BQ6ZMZ0 732 aa10.33□□□□□ -0.76
SSBP2-204ENST00000504985 FCF1Q9Y324 198 aaKnown RBP10.33□□□□□ -0.76
SSBP2-204ENST00000504985 DNMBPQ6XZF7 1577 aa10.31□□□□□ -0.76
SSBP2-204ENST00000504985 GRIPAP1Q4V328 841 aa10.31□□□□□ -0.76
SSBP2-204ENST00000504985 PRDM9Q9NQV7 894 aa10.31□□□□□ -0.76
SSBP2-204ENST00000504985 PDS5BQ9NTI5 1447 aa10.3□□□□□ -0.76
SSBP2-204ENST00000504985 TNFRSF10AO00220 468 aa10.3□□□□□ -0.76
SSBP2-204ENST00000504985 MMP16P51512 607 aa10.3□□□□□ -0.76
SSBP2-204ENST00000504985 ZNF787Q6DD87 383 aa10.3□□□□□ -0.76
SSBP2-204ENST00000504985 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.3□□□□□ -0.76
SSBP2-204ENST00000504985 SOGA1O94964 1423 aa10.3□□□□□ -0.76
SSBP2-204ENST00000504985 URB2Q14146 1524 aaKnown RBP10.3□□□□□ -0.76
SSBP2-204ENST00000504985 PKDCCQ504Y2 493 aa10.29□□□□□ -0.76
SSBP2-204ENST00000504985 TOPBP1Q92547 1522 aa10.29□□□□□ -0.76
SSBP2-204ENST00000504985 TULP1O00294 542 aaPredicted RBP10.28□□□□□ -0.76
SSBP2-204ENST00000504985 KDM4AO75164 1064 aa10.28□□□□□ -0.76
SSBP2-204ENST00000504985 CCDC102AQ96A19 550 aa10.28□□□□□ -0.76
SSBP2-204ENST00000504985 TOR4AQ9NXH8 423 aa10.28□□□□□ -0.76
SSBP2-204ENST00000504985 RUSC2Q8N2Y8 1516 aa10.28□□□□□ -0.76
SSBP2-204ENST00000504985 MDM2Q00987 491 aaPredicted RBP10.27□□□□□ -0.76
SSBP2-204ENST00000504985 Q3C1V9 767 aa10.27□□□□□ -0.76
SSBP2-204ENST00000504985 FGD5Q6ZNL6 1462 aa10.27□□□□□ -0.77
SSBP2-204ENST00000504985 CD2BP2O95400 341 aaKnown RBP10.26□□□□□ -0.77
SSBP2-204ENST00000504985 USP46P62068 366 aa10.26□□□□□ -0.77
SSBP2-204ENST00000504985 FAM217BQ9NTX9 383 aaPredicted RBP10.26□□□□□ -0.77
SSBP2-204ENST00000504985 DXOO77932 396 aaKnown RBP10.25□□□□□ -0.77
SSBP2-204ENST00000504985 AVPP01185 164 aa10.25□□□□□ -0.77
SSBP2-204ENST00000504985 ZEB1P37275 1124 aaPredicted RBP10.25□□□□□ -0.77
SSBP2-204ENST00000504985 EEA1Q15075 1411 aa10.25□□□□□ -0.77
SSBP2-204ENST00000504985 CRIPAKQ8N1N5 446 aa10.25□□□□□ -0.77
SSBP2-204ENST00000504985 THOC2Q8NI27 1593 aaKnown RBP10.25□□□□□ -0.77
SSBP2-204ENST00000504985 FAM187AA6NFU0 413 aa10.24□□□□□ -0.77
SSBP2-204ENST00000504985 FAM9AQ8IZU1 332 aaPredicted RBP10.24□□□□□ -0.77
SSBP2-204ENST00000504985 GPCPD1Q9NPB8 672 aa10.24□□□□□ -0.77
SSBP2-204ENST00000504985 WDR97A6NE52 1622 aa10.23□□□□□ -0.77
SSBP2-204ENST00000504985 HOXA2O43364 376 aa10.23□□□□□ -0.77
SSBP2-204ENST00000504985 HLA-CQ95604 372 aa10.23□□□□□ -0.77
SSBP2-204ENST00000504985 USB1Q9BQ65 265 aaKnown RBP10.23□□□□□ -0.77
SSBP2-204ENST00000504985 REPIN1Q9BWE0 567 aaKnown RBP10.23□□□□□ -0.77
SSBP2-204ENST00000504985 AAASQ9NRG9 546 aa10.23□□□□□ -0.77
SSBP2-204ENST00000504985 POLA1P09884 1462 aaPredicted RBP10.23□□□□□ -0.77
SSBP2-204ENST00000504985 MRC2Q9UBG0 1479 aa10.23□□□□□ -0.77
SSBP2-204ENST00000504985 POTECB2RU33 542 aa10.22□□□□□ -0.77
SSBP2-204ENST00000504985 CLCN1P35523 988 aa10.22□□□□□ -0.77
SSBP2-204ENST00000504985 FOXC1Q12948 553 aa10.22□□□□□ -0.77
SSBP2-204ENST00000504985 ZNF775Q96BV0 537 aaPredicted RBP10.21□□□□□ -0.78
SSBP2-204ENST00000504985 WDR62O43379 1518 aa10.2□□□□□ -0.78
SSBP2-204ENST00000504985 LOC105371045A0A1W2PR82 267 aa10.2□□□□□ -0.78
SSBP2-204ENST00000504985 ACIN1Q9UKV3 1341 aaKnown RBP10.2□□□□□ -0.78
SSBP2-204ENST00000504985 BARGINQ6ZT62 677 aa10.19□□□□□ -0.78
SSBP2-204ENST00000504985 WNT7AO00755 349 aa10.18□□□□□ -0.78
SSBP2-204ENST00000504985 RAD54L2Q9Y4B4 1467 aa10.18□□□□□ -0.78
SSBP2-204ENST00000504985 KIF21BO75037 1637 aa10.18□□□□□ -0.78
SSBP2-204ENST00000504985 ST8SIA5O15466 376 aa10.17□□□□□ -0.78
SSBP2-204ENST00000504985 ZBTB24O43167 697 aaPredicted RBP10.17□□□□□ -0.78
SSBP2-204ENST00000504985 ZMYND10O75800 440 aa10.17□□□□□ -0.78
SSBP2-204ENST00000504985 SMCPP49901 116 aaPredicted RBP10.17□□□□□ -0.78
SSBP2-204ENST00000504985 TRIM32Q13049 653 aa10.17□□□□□ -0.78
SSBP2-204ENST00000504985 ABCA10Q8WWZ4 1543 aa10.17□□□□□ -0.78
SSBP2-204ENST00000504985 TARBP1Q13395 1621 aaKnown RBP10.17□□□□□ -0.78
SSBP2-204ENST00000504985 KIF27Q86VH2 1401 aa10.16□□□□□ -0.78
SSBP2-204ENST00000504985 GUCA2AQ02747 115 aa10.15□□□□□ -0.78
SSBP2-204ENST00000504985 PPARGC1BQ86YN6 1023 aaKnown RBP10.15□□□□□ -0.78
SSBP2-204ENST00000504985 CYP4X1Q8N118 509 aa10.15□□□□□ -0.78
SSBP2-204ENST00000504985 ABCA5Q8WWZ7 1642 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms