RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 STRCP1A6NGW2 1772 aa13.55□□□□□ -0.24
SSBP2-202ENST00000504136 VGFO15240 615 aaPredicted RBP13.55□□□□□ -0.24
SSBP2-202ENST00000504136 ATN1P54259 1190 aaPredicted RBP13.55□□□□□ -0.24
SSBP2-202ENST00000504136 TMEM106CQ9BVX2 250 aa13.55□□□□□ -0.24
SSBP2-202ENST00000504136 SLC52A1Q9NWF4 448 aa13.55□□□□□ -0.24
SSBP2-202ENST00000504136 TMEM131LA2VDJ0 1609 aa13.54□□□□□ -0.24
SSBP2-202ENST00000504136 IDI1Q13907 227 aa13.54□□□□□ -0.24
SSBP2-202ENST00000504136 PELP1Q8IZL8 1130 aaKnown RBP13.54□□□□□ -0.24
SSBP2-202ENST00000504136 NAIPQ13075 1403 aa13.53□□□□□ -0.24
SSBP2-202ENST00000504136 LTKP29376 864 aa13.52□□□□□ -0.25
SSBP2-202ENST00000504136 ZFYVE9O95405 1425 aa13.52□□□□□ -0.25
SSBP2-202ENST00000504136 MYO5BQ9ULV0 1848 aa13.51□□□□□ -0.25
SSBP2-202ENST00000504136 HFM1A2PYH4 1435 aa13.51□□□□□ -0.25
SSBP2-202ENST00000504136 ALKQ9UM73 1620 aa13.5□□□□□ -0.25
SSBP2-202ENST00000504136 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.5□□□□□ -0.25
SSBP2-202ENST00000504136 POTEB2H3BUK9 544 aa13.5□□□□□ -0.25
SSBP2-202ENST00000504136 PPARGC1BQ86YN6 1023 aaKnown RBP13.5□□□□□ -0.25
SSBP2-202ENST00000504136 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
SSBP2-202ENST00000504136 PCDH10Q9P2E7 1040 aa13.5□□□□□ -0.25
SSBP2-202ENST00000504136 LRRC7Q96NW7 1537 aa13.49□□□□□ -0.25
SSBP2-202ENST00000504136 NUP155O75694 1391 aa13.49□□□□□ -0.25
SSBP2-202ENST00000504136 SPHKAPQ2M3C7 1700 aa13.49□□□□□ -0.25
SSBP2-202ENST00000504136 NWD1Q149M9 1564 aa13.49□□□□□ -0.25
SSBP2-202ENST00000504136 TXNDC2Q86VQ3 553 aa13.48□□□□□ -0.25
SSBP2-202ENST00000504136 TRIM35Q9UPQ4 493 aa13.48□□□□□ -0.25
SSBP2-202ENST00000504136 EID1Q9Y6B2 187 aa13.47□□□□□ -0.25
SSBP2-202ENST00000504136 XIRP1Q702N8 1843 aaKnown RBP13.47□□□□□ -0.25
SSBP2-202ENST00000504136 TAOK2Q9UL54 1235 aa13.46□□□□□ -0.25
SSBP2-202ENST00000504136 PLEKHG1Q9ULL1 1385 aa13.45□□□□□ -0.26
SSBP2-202ENST00000504136 TRPM2O94759 1503 aa13.44□□□□□ -0.26
SSBP2-202ENST00000504136 ITGAEP38570 1179 aa13.44□□□□□ -0.26
SSBP2-202ENST00000504136 RIMS2Q9UQ26 1411 aa13.44□□□□□ -0.26
SSBP2-202ENST00000504136 DIP2AQ14689 1571 aa13.44□□□□□ -0.26
SSBP2-202ENST00000504136 NKTRP30414 1462 aaKnown RBP13.43□□□□□ -0.26
SSBP2-202ENST00000504136 CHD2O14647 1828 aaKnown RBP13.42□□□□□ -0.26
SSBP2-202ENST00000504136 UBAP1LF5GYI3 381 aa13.42□□□□□ -0.26
SSBP2-202ENST00000504136 CLTCL1P53675 1640 aa13.41□□□□□ -0.26
SSBP2-202ENST00000504136 SLC39A7Q92504 469 aa13.4□□□□□ -0.26
SSBP2-202ENST00000504136 BCL11BQ9C0K0 894 aaPredicted RBP13.4□□□□□ -0.26
SSBP2-202ENST00000504136 ADAMTS13Q76LX8 1427 aa13.39□□□□□ -0.27
SSBP2-202ENST00000504136 TOM1O60784 492 aa13.39□□□□□ -0.27
SSBP2-202ENST00000504136 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.39□□□□□ -0.27
SSBP2-202ENST00000504136 CABP2Q9NPB3 220 aa13.39□□□□□ -0.27
SSBP2-202ENST00000504136 SETBP1Q9Y6X0 1596 aa13.39□□□□□ -0.27
SSBP2-202ENST00000504136 NRXN3Q9Y4C0 1643 aa13.39□□□□□ -0.27
SSBP2-202ENST00000504136 PIK3R4Q99570 1358 aa13.38□□□□□ -0.27
SSBP2-202ENST00000504136 STK25O00506 426 aa13.38□□□□□ -0.27
SSBP2-202ENST00000504136 KCNA6P17658 529 aa13.38□□□□□ -0.27
SSBP2-202ENST00000504136 HDGFP51858 240 aaKnown RBP13.38□□□□□ -0.27
SSBP2-202ENST00000504136 IER5LQ5T953 404 aa13.38□□□□□ -0.27
SSBP2-202ENST00000504136 HS6ST3Q8IZP7 471 aa13.38□□□□□ -0.27
SSBP2-202ENST00000504136 C7P10643 843 aa13.37□□□□□ -0.27
SSBP2-202ENST00000504136 TBX22Q9Y458 520 aa13.37□□□□□ -0.27
SSBP2-202ENST00000504136 NEXMIFQ5QGS0 1516 aa13.37□□□□□ -0.27
SSBP2-202ENST00000504136 KIF1BO60333 1816 aa13.36□□□□□ -0.27
SSBP2-202ENST00000504136 METRNQ9UJH8 293 aa13.36□□□□□ -0.27
SSBP2-202ENST00000504136 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
SSBP2-202ENST00000504136 STK24Q9Y6E0 443 aa13.35□□□□□ -0.27
SSBP2-202ENST00000504136 NCOA3Q9Y6Q9 1424 aa13.35□□□□□ -0.27
SSBP2-202ENST00000504136 SLC26A8Q96RN1 970 aa13.34□□□□□ -0.27
SSBP2-202ENST00000504136 ACIN1Q9UKV3 1341 aaKnown RBP13.34□□□□□ -0.27
SSBP2-202ENST00000504136 TMEM94Q12767 1356 aa13.33□□□□□ -0.27
SSBP2-202ENST00000504136 XRN1Q8IZH2 1706 aaKnown RBP13.33□□□□□ -0.27
SSBP2-202ENST00000504136 IRX5P78411 483 aaPredicted RBP13.33□□□□□ -0.28
SSBP2-202ENST00000504136 CHGAP10645 457 aaKnown RBP13.32□□□□□ -0.28
SSBP2-202ENST00000504136 EFCAB3Q8N7B9 438 aa13.32□□□□□ -0.28
SSBP2-202ENST00000504136 FAM135BQ49AJ0 1406 aa13.31□□□□□ -0.28
SSBP2-202ENST00000504136 SETD1AO15047 1707 aaKnown RBP13.31□□□□□ -0.28
SSBP2-202ENST00000504136 PPP1R15AO75807 674 aaPredicted RBP13.31□□□□□ -0.28
SSBP2-202ENST00000504136 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
SSBP2-202ENST00000504136 COLQQ9Y215 455 aaPredicted RBP13.31□□□□□ -0.28
SSBP2-202ENST00000504136 PRAG1Q86YV5 1406 aa13.3□□□□□ -0.28
SSBP2-202ENST00000504136 MKRN3Q13064 507 aaKnown RBP13.3□□□□□ -0.28
SSBP2-202ENST00000504136 PPLO60437 1756 aa13.3□□□□□ -0.28
SSBP2-202ENST00000504136 PTPRUQ92729 1446 aa13.3□□□□□ -0.28
SSBP2-202ENST00000504136 HSPA1LP34931 641 aa13.29□□□□□ -0.28
SSBP2-202ENST00000504136 SETD5Q9C0A6 1442 aa13.28□□□□□ -0.28
SSBP2-202ENST00000504136 IFT172Q9UG01 1749 aa13.27□□□□□ -0.28
SSBP2-202ENST00000504136 PIP4K2BP78356 416 aa13.27□□□□□ -0.29
SSBP2-202ENST00000504136 PROSER2Q86WR7 435 aaPredicted RBP13.27□□□□□ -0.29
SSBP2-202ENST00000504136 TRIM52Q96A61 297 aa13.27□□□□□ -0.29
SSBP2-202ENST00000504136 DCCP43146 1447 aa13.26□□□□□ -0.29
SSBP2-202ENST00000504136 MED1Q15648 1581 aaPredicted RBP13.26□□□□□ -0.29
SSBP2-202ENST00000504136 RPGRIP1LQ68CZ1 1315 aa13.26□□□□□ -0.29
SSBP2-202ENST00000504136 SPATA31E1Q6ZUB1 1445 aa13.26□□□□□ -0.29
SSBP2-202ENST00000504136 PDCD7Q8N8D1 485 aaKnown RBP13.26□□□□□ -0.29
SSBP2-202ENST00000504136 ROBO1Q9Y6N7 1651 aa13.26□□□□□ -0.29
SSBP2-202ENST00000504136 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.25□□□□□ -0.29
SSBP2-202ENST00000504136 MSH6P52701 1360 aa13.25□□□□□ -0.29
SSBP2-202ENST00000504136 SOX12O15370 315 aa13.24□□□□□ -0.29
SSBP2-202ENST00000504136 NUTM2DQ5VT03 806 aaPredicted RBP13.24□□□□□ -0.29
SSBP2-202ENST00000504136 OCEL1Q9H607 264 aa13.24□□□□□ -0.29
SSBP2-202ENST00000504136 CCDC144AA2RUR9 1427 aa13.23□□□□□ -0.29
SSBP2-202ENST00000504136 METP08581 1390 aa13.23□□□□□ -0.29
SSBP2-202ENST00000504136 DISP3Q9P2K9 1392 aa13.23□□□□□ -0.29
SSBP2-202ENST00000504136 BCANQ96GW7 911 aa13.23□□□□□ -0.29
SSBP2-202ENST00000504136 MPHOSPH9Q99550 1183 aa13.23□□□□□ -0.29
SSBP2-202ENST00000504136 PTCH1Q13635 1447 aa13.22□□□□□ -0.29
SSBP2-202ENST00000504136 SEC24BO95487 1268 aa13.22□□□□□ -0.29
SSBP2-202ENST00000504136 MFRPQ9BY79 579 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms