RNA–Protein interactions for RNA: ENST00000498803.5

SPIRE1-211, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-211ENST00000498803 YTHDC1Q96MU7 727 aaKnown RBP11.47□□□□□ -0.57
SPIRE1-211ENST00000498803 BRD4O60885 1362 aaPredicted RBP11.46□□□□□ -0.57
SPIRE1-211ENST00000498803 PARD3Q8TEW0 1356 aa11.46□□□□□ -0.57
SPIRE1-211ENST00000498803 TMC1Q8TDI8 760 aa11.46□□□□□ -0.57
SPIRE1-211ENST00000498803 MRS2Q9HD23 443 aa11.46□□□□□ -0.57
SPIRE1-211ENST00000498803 KNDC1Q76NI1 1749 aa11.46□□□□□ -0.58
SPIRE1-211ENST00000498803 CPS1P31327 1500 aa11.45□□□□□ -0.58
SPIRE1-211ENST00000498803 MINK1Q8N4C8 1332 aaPredicted RBP11.45□□□□□ -0.58
SPIRE1-211ENST00000498803 SAFB2Q14151 953 aaKnown RBP eCLIP11.45□□□□□ -0.58
SPIRE1-211ENST00000498803 NLRP13Q86W25 1043 aa11.45□□□□□ -0.58
SPIRE1-211ENST00000498803 SENP3Q9H4L4 574 aaPredicted RBP11.45□□□□□ -0.58
SPIRE1-211ENST00000498803 TERF2IPQ9NYB0 399 aa11.45□□□□□ -0.58
SPIRE1-211ENST00000498803 TULP4Q9NRJ4 1543 aa11.45□□□□□ -0.58
SPIRE1-211ENST00000498803 SLC26A8Q96RN1 970 aa11.44□□□□□ -0.58
SPIRE1-211ENST00000498803 CDK19Q9BWU1 502 aa11.44□□□□□ -0.58
SPIRE1-211ENST00000498803 PTCH1Q13635 1447 aa11.43□□□□□ -0.58
SPIRE1-211ENST00000498803 ANKRD36BQ8N2N9 1353 aa11.43□□□□□ -0.58
SPIRE1-211ENST00000498803 WASLO00401 505 aaPredicted RBP11.43□□□□□ -0.58
SPIRE1-211ENST00000498803 AMER1Q5JTC6 1135 aaPredicted RBP11.43□□□□□ -0.58
SPIRE1-211ENST00000498803 WAPLQ7Z5K2 1190 aa11.43□□□□□ -0.58
SPIRE1-211ENST00000498803 CABP2Q9NPB3 220 aa11.43□□□□□ -0.58
SPIRE1-211ENST00000498803 NSD2O96028 1365 aa11.42□□□□□ -0.58
SPIRE1-211ENST00000498803 HDGFL2Q7Z4V5 671 aaPredicted RBP11.42□□□□□ -0.58
SPIRE1-211ENST00000498803 SLC12A5Q9H2X9 1139 aa11.42□□□□□ -0.58
SPIRE1-211ENST00000498803 AMOTL2Q9Y2J4 779 aa11.42□□□□□ -0.58
SPIRE1-211ENST00000498803 MYOM1P52179 1685 aa11.42□□□□□ -0.58
SPIRE1-211ENST00000498803 CGNL1Q0VF96 1302 aa11.41□□□□□ -0.58
SPIRE1-211ENST00000498803 CC2D1BQ5T0F9 858 aaKnown RBP11.41□□□□□ -0.58
SPIRE1-211ENST00000498803 ROBO2Q9HCK4 1378 aa11.4□□□□□ -0.59
SPIRE1-211ENST00000498803 PLEKHH1Q9ULM0 1364 aa11.4□□□□□ -0.59
SPIRE1-211ENST00000498803 NPHP4O75161 1426 aaPredicted RBP11.39□□□□□ -0.59
SPIRE1-211ENST00000498803 CARD14Q9BXL6 1004 aa11.39□□□□□ -0.59
SPIRE1-211ENST00000498803 NSD3Q9BZ95 1437 aa11.39□□□□□ -0.59
SPIRE1-211ENST00000498803 CCDC61Q9Y6R9 512 aa11.39□□□□□ -0.59
SPIRE1-211ENST00000498803 PTPRUQ92729 1446 aa11.38□□□□□ -0.59
SPIRE1-211ENST00000498803 CNGB1Q14028 1251 aaPredicted RBP11.38□□□□□ -0.59
SPIRE1-211ENST00000498803 INSRP06213 1382 aa11.38□□□□□ -0.59
SPIRE1-211ENST00000498803 ATP7BP35670 1465 aa11.38□□□□□ -0.59
SPIRE1-211ENST00000498803 ADGRB2O60241 1585 aa11.37□□□□□ -0.59
SPIRE1-211ENST00000498803 PNISRQ8TF01 805 aaKnown RBP11.37□□□□□ -0.59
SPIRE1-211ENST00000498803 USP32Q8NFA0 1604 aa11.37□□□□□ -0.59
SPIRE1-211ENST00000498803 PPP2R1AP30153 589 aa11.36□□□□□ -0.59
SPIRE1-211ENST00000498803 MORC1Q86VD1 984 aa11.36□□□□□ -0.59
SPIRE1-211ENST00000498803 FAM9BQ8IZU0 186 aa11.36□□□□□ -0.59
SPIRE1-211ENST00000498803 NUDT16Q96DE0 195 aaKnown RBP11.36□□□□□ -0.59
SPIRE1-211ENST00000498803 ZNF692Q9BU19 519 aaPredicted RBP11.36□□□□□ -0.59
SPIRE1-211ENST00000498803 CABP1Q9NZU7 370 aa11.36□□□□□ -0.59
SPIRE1-211ENST00000498803 KCNA6P17658 529 aa11.35□□□□□ -0.59
SPIRE1-211ENST00000498803 CCDC184Q52MB2 194 aa11.35□□□□□ -0.59
SPIRE1-211ENST00000498803 A0A1W2PP64 1363 aa11.35□□□□□ -0.59
SPIRE1-211ENST00000498803 XRN1Q8IZH2 1706 aaKnown RBP11.35□□□□□ -0.59
SPIRE1-211ENST00000498803 HNRNPUQ00839 825 aaKnown RBP eCLIP11.34□□□□□ -0.59
SPIRE1-211ENST00000498803 PPIP5K1Q6PFW1 1433 aa11.34□□□□□ -0.59
SPIRE1-211ENST00000498803 ANKARQ7Z5J8 1434 aa11.33□□□□□ -0.6
SPIRE1-211ENST00000498803 NCKAP5LQ9HCH0 1330 aa11.33□□□□□ -0.6
SPIRE1-211ENST00000498803 KDM4FA0A1W2PPD8 638 aa11.32□□□□□ -0.6
SPIRE1-211ENST00000498803 PLEKHG3A1L390 1219 aa11.32□□□□□ -0.6
SPIRE1-211ENST00000498803 CPSF1Q10570 1443 aaKnown RBP11.32□□□□□ -0.6
SPIRE1-211ENST00000498803 EDC4Q6P2E9 1401 aaKnown RBP11.32□□□□□ -0.6
SPIRE1-211ENST00000498803 CD163L1Q9NR16 1453 aa11.32□□□□□ -0.6
SPIRE1-211ENST00000498803 CFAP53Q96M91 514 aa11.31□□□□□ -0.6
SPIRE1-211ENST00000498803 ZBED9Q6R2W3 1325 aa11.31□□□□□ -0.6
SPIRE1-211ENST00000498803 POLR3AO14802 1390 aaPredicted RBP11.3□□□□□ -0.6
SPIRE1-211ENST00000498803 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.3□□□□□ -0.6
SPIRE1-211ENST00000498803 WDR43Q15061 677 aaKnown RBP eCLIP11.3□□□□□ -0.6
SPIRE1-211ENST00000498803 CHD2O14647 1828 aaKnown RBP11.3□□□□□ -0.6
SPIRE1-211ENST00000498803 CDC42BPGQ6DT37 1551 aa11.29□□□□□ -0.6
SPIRE1-211ENST00000498803 FYB1O15117 783 aa11.29□□□□□ -0.6
SPIRE1-211ENST00000498803 NKTRP30414 1462 aaKnown RBP11.29□□□□□ -0.6
SPIRE1-211ENST00000498803 SCAF1Q9H7N4 1312 aaKnown RBP11.29□□□□□ -0.6
SPIRE1-211ENST00000498803 ADGRL3Q9HAR2 1447 aa11.28□□□□□ -0.6
SPIRE1-211ENST00000498803 NCOA3Q9Y6Q9 1424 aa11.28□□□□□ -0.6
SPIRE1-211ENST00000498803 PRR36Q9H6K5 1346 aa11.28□□□□□ -0.6
SPIRE1-211ENST00000498803 NWD1Q149M9 1564 aa11.28□□□□□ -0.6
SPIRE1-211ENST00000498803 NGEFQ8N5V2 710 aa11.27□□□□□ -0.61
SPIRE1-211ENST00000498803 C14orf37Q86TY3 774 aa11.26□□□□□ -0.61
SPIRE1-211ENST00000498803 PROSER2Q86WR7 435 aaPredicted RBP11.26□□□□□ -0.61
SPIRE1-211ENST00000498803 GGNBP2Q9H3C7 697 aa11.26□□□□□ -0.61
SPIRE1-211ENST00000498803 ACEP12821 1306 aa11.26□□□□□ -0.61
SPIRE1-211ENST00000498803 TTC21AQ8NDW8 1320 aa11.26□□□□□ -0.61
SPIRE1-211ENST00000498803 NGDNQ8NEJ9 315 aaKnown RBP11.25□□□□□ -0.61
SPIRE1-211ENST00000498803 COG3Q96JB2 828 aa11.25□□□□□ -0.61
SPIRE1-211ENST00000498803 DMRT2Q9Y5R5 561 aa11.25□□□□□ -0.61
SPIRE1-211ENST00000498803 ITSN1Q15811 1721 aa11.25□□□□□ -0.61
SPIRE1-211ENST00000498803 LMTK3Q96Q04 1460 aa11.25□□□□□ -0.61
SPIRE1-211ENST00000498803 TOPAZ1Q8N9V7 1692 aa11.24□□□□□ -0.61
SPIRE1-211ENST00000498803 MTHFSP49914 203 aa11.24□□□□□ -0.61
SPIRE1-211ENST00000498803 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.24□□□□□ -0.61
SPIRE1-211ENST00000498803 C19orf44Q9H6X5 657 aa11.24□□□□□ -0.61
SPIRE1-211ENST00000498803 NUDCQ9Y266 331 aa11.24□□□□□ -0.61
SPIRE1-211ENST00000498803 USP6P35125 1406 aa11.24□□□□□ -0.61
SPIRE1-211ENST00000498803 BLMP54132 1417 aaPredicted RBP11.24□□□□□ -0.61
SPIRE1-211ENST00000498803 TNNT2P45379 298 aaPredicted RBP11.23□□□□□ -0.61
SPIRE1-211ENST00000498803 HSPA2P54652 639 aa11.23□□□□□ -0.61
SPIRE1-211ENST00000498803 PDE3BQ13370 1112 aa11.23□□□□□ -0.61
SPIRE1-211ENST00000498803 TTC21BQ7Z4L5 1316 aa11.23□□□□□ -0.61
SPIRE1-211ENST00000498803 AATKQ6ZMQ8 1374 aa11.23□□□□□ -0.61
SPIRE1-211ENST00000498803 NUTM2FA1L443 756 aa11.22□□□□□ -0.61
SPIRE1-211ENST00000498803 DCCP43146 1447 aa11.22□□□□□ -0.61
SPIRE1-211ENST00000498803 MON2Q7Z3U7 1717 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms