RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 RTL5Q5HYW3 569 aaPredicted RBP10.39□□□□□ -0.75
PMPCB-208ENST00000498530 TMCO4Q5TGY1 634 aa10.39□□□□□ -0.75
PMPCB-208ENST00000498530 RGS22Q8NE09 1264 aa10.39□□□□□ -0.75
PMPCB-208ENST00000498530 IRX2Q9BZI1 471 aaPredicted RBP10.39□□□□□ -0.75
PMPCB-208ENST00000498530 USTQ9Y2C2 406 aa10.39□□□□□ -0.75
PMPCB-208ENST00000498530 PCDHB15Q9Y5E8 787 aa10.39□□□□□ -0.75
PMPCB-208ENST00000498530 NDUFV2P19404 249 aa10.38□□□□□ -0.75
PMPCB-208ENST00000498530 WASHC4Q2M389 1173 aa10.38□□□□□ -0.75
PMPCB-208ENST00000498530 ZBTB3Q9H5J0 574 aa10.38□□□□□ -0.75
PMPCB-208ENST00000498530 NUDT18Q6ZVK8 323 aa10.37□□□□□ -0.75
PMPCB-208ENST00000498530 A0A0G2JS52 829 aa10.36□□□□□ -0.75
PMPCB-208ENST00000498530 GPR37L1O60883 481 aa10.36□□□□□ -0.75
PMPCB-208ENST00000498530 KCNH8Q96L42 1107 aa10.36□□□□□ -0.75
PMPCB-208ENST00000498530 NUTM2BA6NNL0 878 aaPredicted RBP10.35□□□□□ -0.75
PMPCB-208ENST00000498530 NUTM2EB1AL46 878 aaPredicted RBP10.35□□□□□ -0.75
PMPCB-208ENST00000498530 TRIM6-TRIM34B2RNG4 842 aa10.35□□□□□ -0.75
PMPCB-208ENST00000498530 KDM4AO75164 1064 aa10.35□□□□□ -0.75
PMPCB-208ENST00000498530 NUTM2DQ5VT03 806 aaPredicted RBP10.35□□□□□ -0.75
PMPCB-208ENST00000498530 NUTM2AQ8IVF1 878 aaPredicted RBP10.35□□□□□ -0.75
PMPCB-208ENST00000498530 ADAMTS19Q8TE59 1207 aa10.35□□□□□ -0.75
PMPCB-208ENST00000498530 TATDN2Q93075 761 aa10.35□□□□□ -0.75
PMPCB-208ENST00000498530 C3orf80F5H4A9 247 aa10.34□□□□□ -0.75
PMPCB-208ENST00000498530 HOXA2O43364 376 aa10.34□□□□□ -0.75
PMPCB-208ENST00000498530 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
PMPCB-208ENST00000498530 KCNA1Q09470 495 aa10.34□□□□□ -0.75
PMPCB-208ENST00000498530 CFAP70Q5T0N1 1121 aa10.34□□□□□ -0.75
PMPCB-208ENST00000498530 THSD4Q6ZMP0 1018 aa10.34□□□□□ -0.75
PMPCB-208ENST00000498530 CABLES1Q8TDN4 633 aa10.34□□□□□ -0.75
PMPCB-208ENST00000498530 GZF1Q9H116 711 aaPredicted RBP10.34□□□□□ -0.75
PMPCB-208ENST00000498530 BRD1O95696 1058 aa10.33□□□□□ -0.76
PMPCB-208ENST00000498530 MFAP1P55081 439 aaKnown RBP10.33□□□□□ -0.76
PMPCB-208ENST00000498530 PTPREP23469 700 aa10.32□□□□□ -0.76
PMPCB-208ENST00000498530 HDGFL1Q5TGJ6 251 aa10.32□□□□□ -0.76
PMPCB-208ENST00000498530 PACS2Q86VP3 889 aa10.32□□□□□ -0.76
PMPCB-208ENST00000498530 SLC4A5Q9BY07 1137 aa10.32□□□□□ -0.76
PMPCB-208ENST00000498530 PNMA3Q9UL41 463 aa10.32□□□□□ -0.76
PMPCB-208ENST00000498530 BHMG1C9JSJ3 638 aaPredicted RBP10.31□□□□□ -0.76
PMPCB-208ENST00000498530 GCGRP47871 477 aa10.31□□□□□ -0.76
PMPCB-208ENST00000498530 RDH13Q8NBN7 331 aa10.31□□□□□ -0.76
PMPCB-208ENST00000498530 TRIM34Q9BYJ4 488 aa10.31□□□□□ -0.76
PMPCB-208ENST00000498530 FDX1P10109 184 aa10.3□□□□□ -0.76
PMPCB-208ENST00000498530 RSPH4AQ5TD94 716 aa10.29□□□□□ -0.76
PMPCB-208ENST00000498530 PPP1R12CQ9BZL4 782 aa10.29□□□□□ -0.76
PMPCB-208ENST00000498530 HMX1Q9NP08 348 aaPredicted RBP10.29□□□□□ -0.76
PMPCB-208ENST00000498530 ALG2Q9H553 416 aa10.28□□□□□ -0.76
PMPCB-208ENST00000498530 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.27□□□□□ -0.77
PMPCB-208ENST00000498530 CSB-PGBD3P0DP91 1061 aa10.27□□□□□ -0.77
PMPCB-208ENST00000498530 SOX11P35716 441 aa10.27□□□□□ -0.77
PMPCB-208ENST00000498530 HELBQ8NG08 1087 aaPredicted RBP10.27□□□□□ -0.77
PMPCB-208ENST00000498530 WNT2BQ93097 391 aa10.27□□□□□ -0.77
PMPCB-208ENST00000498530 PCDHGC3Q9UN70 934 aa10.27□□□□□ -0.77
PMPCB-208ENST00000498530 MTMR7Q9Y216 660 aa10.27□□□□□ -0.77
PMPCB-208ENST00000498530 CTDSPL2Q05D32 466 aa10.25□□□□□ -0.77
PMPCB-208ENST00000498530 MTMR2Q13614 643 aa10.25□□□□□ -0.77
PMPCB-208ENST00000498530 ZBED2Q9BTP6 218 aa10.25□□□□□ -0.77
PMPCB-208ENST00000498530 GOLGA8CPA6NN73 597 aa10.24□□□□□ -0.77
PMPCB-208ENST00000498530 PALM3A6NDB9 673 aaPredicted RBP10.23□□□□□ -0.77
PMPCB-208ENST00000498530 VAC14Q08AM6 782 aa10.23□□□□□ -0.77
PMPCB-208ENST00000498530 MRPL50Q8N5N7 158 aaKnown RBP10.23□□□□□ -0.77
PMPCB-208ENST00000498530 ATG7O95352 703 aa10.21□□□□□ -0.77
PMPCB-208ENST00000498530 SLC10A3P09131 477 aa10.21□□□□□ -0.77
PMPCB-208ENST00000498530 RFX1P22670 979 aa10.21□□□□□ -0.77
PMPCB-208ENST00000498530 UCN2Q96RP3 112 aa10.21□□□□□ -0.77
PMPCB-208ENST00000498530 CFAP99D6REC4 459 aa10.2□□□□□ -0.78
PMPCB-208ENST00000498530 SMAPO00193 183 aa10.2□□□□□ -0.78
PMPCB-208ENST00000498530 GUCA2AQ02747 115 aa10.2□□□□□ -0.78
PMPCB-208ENST00000498530 LRRN4Q8WUT4 740 aa10.2□□□□□ -0.78
PMPCB-208ENST00000498530 PROX2Q3B8N5 592 aa10.19□□□□□ -0.78
PMPCB-208ENST00000498530 GRIPAP1Q4V328 841 aa10.18□□□□□ -0.78
PMPCB-208ENST00000498530 HLA-CQ95604 372 aa10.18□□□□□ -0.78
PMPCB-208ENST00000498530 LMOD1P29536 600 aaPredicted RBP10.17□□□□□ -0.78
PMPCB-208ENST00000498530 PRR7Q8TB68 274 aa10.17□□□□□ -0.78
PMPCB-208ENST00000498530 NBPF3Q9H094 633 aa10.17□□□□□ -0.78
PMPCB-208ENST00000498530 TMEM88BA6NKF7 163 aa10.16□□□□□ -0.78
PMPCB-208ENST00000498530 ITGBL1O95965 494 aaPredicted RBP10.16□□□□□ -0.78
PMPCB-208ENST00000498530 SWT1Q5T5J6 900 aaKnown RBP10.16□□□□□ -0.78
PMPCB-208ENST00000498530 SLF2Q8IX21 1173 aa10.16□□□□□ -0.78
PMPCB-208ENST00000498530 MAFBQ9Y5Q3 323 aaPredicted RBP10.16□□□□□ -0.78
PMPCB-208ENST00000498530 FOXD4L5Q5VV16 416 aaPredicted RBP10.15□□□□□ -0.78
PMPCB-208ENST00000498530 Q6ZNB5 142 aa10.15□□□□□ -0.78
PMPCB-208ENST00000498530 SND1Q7KZF4 910 aaKnown RBP eCLIP10.15□□□□□ -0.781e-7■■■□□ 15.6
PMPCB-208ENST00000498530 FOXD4L4Q8WXT5 416 aaPredicted RBP10.15□□□□□ -0.78
PMPCB-208ENST00000498530 KIAA1468Q9P260 1216 aa10.15□□□□□ -0.78
PMPCB-208ENST00000498530 TFIP11Q9UBB9 837 aaKnown RBP10.15□□□□□ -0.78
PMPCB-208ENST00000498530 AMOTL2Q9Y2J4 779 aa10.15□□□□□ -0.78
PMPCB-208ENST00000498530 EPS8L1Q8TE68 723 aa10.14□□□□□ -0.79
PMPCB-208ENST00000498530 C6orf229H3BNL8 230 aa10.13□□□□□ -0.79
PMPCB-208ENST00000498530 PNMA1Q8ND90 353 aa10.13□□□□□ -0.79
PMPCB-208ENST00000498530 TSC1Q92574 1164 aa10.13□□□□□ -0.79
PMPCB-208ENST00000498530 VRTNQ9H8Y1 702 aa10.13□□□□□ -0.79
PMPCB-208ENST00000498530 GNEQ9Y223 722 aaKnown RBP10.13□□□□□ -0.79
PMPCB-208ENST00000498530 IVNS1ABPQ9Y6Y0 642 aa10.13□□□□□ -0.79
PMPCB-208ENST00000498530 SLC4A3P48751 1232 aa10.12□□□□□ -0.79
PMPCB-208ENST00000498530 FUT2Q10981 343 aa10.12□□□□□ -0.79
PMPCB-208ENST00000498530 SEMA3FQ13275 785 aa10.12□□□□□ -0.79
PMPCB-208ENST00000498530 ELOAQ14241 798 aaKnown RBP10.12□□□□□ -0.79
PMPCB-208ENST00000498530 DESI1Q6ICB0 168 aa10.12□□□□□ -0.79
PMPCB-208ENST00000498530 B4GALNT3Q6L9W6 998 aa10.12□□□□□ -0.79
PMPCB-208ENST00000498530 RABGEF1Q9UJ41 708 aa10.12□□□□□ -0.79
PMPCB-208ENST00000498530 ATP9BO43861 1147 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms