RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 EYA1Q99502 592 aa6.7□□□□□ -1.34
CALD1-224ENST00000498254 MOXD2PA6NHM9 499 aa6.69□□□□□ -1.34
CALD1-224ENST00000498254 NDUFV2P19404 249 aa6.69□□□□□ -1.34
CALD1-224ENST00000498254 RDH13Q8NBN7 331 aa6.69□□□□□ -1.34
CALD1-224ENST00000498254 NBPF26B4DH59 902 aa6.68□□□□□ -1.34
CALD1-224ENST00000498254 DNAJB2P25686 324 aa6.68□□□□□ -1.34
CALD1-224ENST00000498254 QPCTQ16769 361 aa6.68□□□□□ -1.34
CALD1-224ENST00000498254 FNBP4Q8N3X1 1017 aaPredicted RBP6.68□□□□□ -1.34
CALD1-224ENST00000498254 TATDN2Q93075 761 aa6.68□□□□□ -1.34
CALD1-224ENST00000498254 CCDC97Q96F63 343 aaPredicted RBP6.68□□□□□ -1.34
CALD1-224ENST00000498254 HRCP23327 699 aa6.67□□□□□ -1.34
CALD1-224ENST00000498254 RSBN1LQ6PCB5 846 aaPredicted RBP6.67□□□□□ -1.34
CALD1-224ENST00000498254 PACS2Q86VP3 889 aa6.67□□□□□ -1.34
CALD1-224ENST00000498254 SULF1Q8IWU6 871 aa6.67□□□□□ -1.34
CALD1-224ENST00000498254 GDPD2Q9HCC8 539 aa6.67□□□□□ -1.34
CALD1-224ENST00000498254 ZNF330Q9Y3S2 320 aaPredicted RBP6.67□□□□□ -1.34
CALD1-224ENST00000498254 AP1G2O75843 785 aa6.66□□□□□ -1.34
CALD1-224ENST00000498254 ABL2P42684 1182 aa6.66□□□□□ -1.34
CALD1-224ENST00000498254 PPP4CP60510 307 aa6.66□□□□□ -1.34
CALD1-224ENST00000498254 TMEM259Q4ZIN3 620 aa6.66□□□□□ -1.34
CALD1-224ENST00000498254 MTMR14Q8NCE2 650 aa6.66□□□□□ -1.34
CALD1-224ENST00000498254 BANK1Q8NDB2 785 aa6.66□□□□□ -1.34
CALD1-224ENST00000498254 CABLES1Q8TDN4 633 aa6.66□□□□□ -1.34
CALD1-224ENST00000498254 PCDHB15Q9Y5E8 787 aa6.66□□□□□ -1.34
CALD1-224ENST00000498254 NUTM2BA6NNL0 878 aaPredicted RBP6.65□□□□□ -1.34
CALD1-224ENST00000498254 NUTM2EB1AL46 878 aaPredicted RBP6.65□□□□□ -1.34
CALD1-224ENST00000498254 SPTLC1O15269 473 aa6.65□□□□□ -1.34
CALD1-224ENST00000498254 WFS1O76024 890 aa6.65□□□□□ -1.34
CALD1-224ENST00000498254 PDIA4P13667 645 aaKnown RBP6.65□□□□□ -1.34
CALD1-224ENST00000498254 TJAP1Q5JTD0 557 aa6.65□□□□□ -1.34
CALD1-224ENST00000498254 NUTM2DQ5VT03 806 aaPredicted RBP6.65□□□□□ -1.34
CALD1-224ENST00000498254 PPP2R2DQ66LE6 453 aa6.65□□□□□ -1.34
CALD1-224ENST00000498254 NUTM2AQ8IVF1 878 aaPredicted RBP6.65□□□□□ -1.34
CALD1-224ENST00000498254 TMEM134Q9H6X4 195 aa6.65□□□□□ -1.34
CALD1-224ENST00000498254 WIPF1O43516 503 aa6.64□□□□□ -1.35
CALD1-224ENST00000498254 RTL5Q5HYW3 569 aaPredicted RBP6.64□□□□□ -1.35
CALD1-224ENST00000498254 PRKD2Q9BZL6 878 aa6.64□□□□□ -1.35
CALD1-224ENST00000498254 GUCA2AQ02747 115 aa6.63□□□□□ -1.35
CALD1-224ENST00000498254 KRTAP1-3Q8IUG1 177 aa6.63□□□□□ -1.35
CALD1-224ENST00000498254 SERPINA10Q9UK55 444 aa6.63□□□□□ -1.35
CALD1-224ENST00000498254 TBC1D2BQ9UPU7 963 aa6.63□□□□□ -1.35
CALD1-224ENST00000498254 LILRB3O75022 631 aa6.62□□□□□ -1.35
CALD1-224ENST00000498254 USP17L8P0C7I0 530 aa6.62□□□□□ -1.35
CALD1-224ENST00000498254 TSC1Q92574 1164 aa6.62□□□□□ -1.35
CALD1-224ENST00000498254 HLA-CQ95604 372 aa6.62□□□□□ -1.35
CALD1-224ENST00000498254 POM121CA8CG34 1229 aa6.61□□□□□ -1.35
CALD1-224ENST00000498254 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.61□□□□□ -1.35
CALD1-224ENST00000498254 KDM4AO75164 1064 aa6.61□□□□□ -1.35
CALD1-224ENST00000498254 XP32Q5T750 250 aa6.61□□□□□ -1.35
CALD1-224ENST00000498254 SAMD7Q7Z3H4 446 aa6.61□□□□□ -1.35
CALD1-224ENST00000498254 IL21Q9HBE4 155 aa6.61□□□□□ -1.35
CALD1-224ENST00000498254 V9GY48 417 aaPredicted RBP6.61□□□□□ -1.35
CALD1-224ENST00000498254 TUSC1Q2TAM9 212 aa6.6□□□□□ -1.35
CALD1-224ENST00000498254 PPP1R18Q6NYC8 613 aa6.6□□□□□ -1.35
CALD1-224ENST00000498254 MTRQ99707 1265 aa6.6□□□□□ -1.35
CALD1-224ENST00000498254 PDZRN3Q9UPQ7 1066 aa6.6□□□□□ -1.35
CALD1-224ENST00000498254 HOXA2O43364 376 aa6.59□□□□□ -1.35
CALD1-224ENST00000498254 FDX1P10109 184 aa6.59□□□□□ -1.35
CALD1-224ENST00000498254 SWT1Q5T5J6 900 aaKnown RBP6.59□□□□□ -1.35
CALD1-224ENST00000498254 WWC1Q8IX03 1113 aa6.59□□□□□ -1.35
CALD1-224ENST00000498254 CALR3Q96L12 384 aaKnown RBP6.59□□□□□ -1.35
CALD1-224ENST00000498254 KRTAP9-2Q9BYQ4 174 aa6.59□□□□□ -1.35
CALD1-224ENST00000498254 ZBTB3Q9H5J0 574 aa6.59□□□□□ -1.35
CALD1-224ENST00000498254 ZBTB7CA1YPR0 619 aa6.58□□□□□ -1.36
CALD1-224ENST00000498254 SLC10A3P09131 477 aa6.58□□□□□ -1.36
CALD1-224ENST00000498254 GCGRP47871 477 aa6.58□□□□□ -1.36
CALD1-224ENST00000498254 NECTIN2Q92692 538 aa6.58□□□□□ -1.36
CALD1-224ENST00000498254 GLMNQ92990 594 aa6.58□□□□□ -1.36
CALD1-224ENST00000498254 PRM3Q9NNZ6 103 aa6.58□□□□□ -1.36
CALD1-224ENST00000498254 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.58□□□□□ -1.36
CALD1-224ENST00000498254 PCDHGC3Q9UN70 934 aa6.58□□□□□ -1.36
CALD1-224ENST00000498254 RNF40O75150 1001 aa6.57□□□□□ -1.36
CALD1-224ENST00000498254 RSPH4AQ5TD94 716 aa6.57□□□□□ -1.36
CALD1-224ENST00000498254 ZNF516Q92618 1163 aa6.57□□□□□ -1.36
CALD1-224ENST00000498254 HMX1Q9NP08 348 aaPredicted RBP6.57□□□□□ -1.36
CALD1-224ENST00000498254 KRTAP9-6A0A140TA67 174 aa6.56□□□□□ -1.36
CALD1-224ENST00000498254 GJA5P36382 358 aa6.56□□□□□ -1.36
CALD1-224ENST00000498254 CTDSPL2Q05D32 466 aa6.56□□□□□ -1.36
CALD1-224ENST00000498254 RETREG2Q8NC44 543 aa6.56□□□□□ -1.36
CALD1-224ENST00000498254 PSMG3-AS1Q96PY0 264 aa6.56□□□□□ -1.36
CALD1-224ENST00000498254 POTECB2RU33 542 aa6.55□□□□□ -1.36
CALD1-224ENST00000498254 HDGFP51858 240 aaKnown RBP6.55□□□□□ -1.36
CALD1-224ENST00000498254 USP46P62068 366 aa6.55□□□□□ -1.36
CALD1-224ENST00000498254 PRPF38BQ5VTL8 546 aaKnown RBP6.55□□□□□ -1.36
CALD1-224ENST00000498254 AEBP1Q8IUX7 1158 aa6.55□□□□□ -1.36
CALD1-224ENST00000498254 LRRN4Q8WUT4 740 aa6.55□□□□□ -1.36
CALD1-224ENST00000498254 GJD4Q96KN9 370 aaPredicted RBP6.55□□□□□ -1.36
CALD1-224ENST00000498254 NDUFB9Q9Y6M9 179 aa6.55□□□□□ -1.36
CALD1-224ENST00000498254 C6orf229H3BNL8 230 aa6.54□□□□□ -1.36
CALD1-224ENST00000498254 APLP1P51693 650 aa6.54□□□□□ -1.36
CALD1-224ENST00000498254 MTMR2Q13614 643 aa6.54□□□□□ -1.36
CALD1-224ENST00000498254 SYMPKQ92797 1274 aaKnown RBP6.54□□□□□ -1.36
CALD1-224ENST00000498254 CFAP99D6REC4 459 aa6.53□□□□□ -1.36
CALD1-224ENST00000498254 CFHP08603 1231 aa6.53□□□□□ -1.36
CALD1-224ENST00000498254 RFX1P22670 979 aa6.53□□□□□ -1.36
CALD1-224ENST00000498254 GGCXP38435 758 aa6.53□□□□□ -1.36
CALD1-224ENST00000498254 FUT2Q10981 343 aa6.53□□□□□ -1.36
CALD1-224ENST00000498254 HELBQ8NG08 1087 aaPredicted RBP6.53□□□□□ -1.36
CALD1-224ENST00000498254 NKX2-3Q8TAU0 364 aa6.53□□□□□ -1.36
CALD1-224ENST00000498254 VAC14Q08AM6 782 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms