RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 THEMISQ8N1K5 641 aaPredicted RBP24.2■■□□□ 1.46
CHRNA4-206ENST00000498043 CABP2Q9NPB3 220 aa24.2■■□□□ 1.46
CHRNA4-206ENST00000498043 CPS1P31327 1500 aa24.19■■□□□ 1.46
CHRNA4-206ENST00000498043 AMER1Q5JTC6 1135 aaPredicted RBP24.18■■□□□ 1.46
CHRNA4-206ENST00000498043 WAPLQ7Z5K2 1190 aa24.18■■□□□ 1.46
CHRNA4-206ENST00000498043 SLC12A5Q9H2X9 1139 aa24.17■■□□□ 1.46
CHRNA4-206ENST00000498043 BRD4O60885 1362 aaPredicted RBP24.17■■□□□ 1.46
CHRNA4-206ENST00000498043 SRPK2P78362 688 aaKnown RBP24.17■■□□□ 1.46
CHRNA4-206ENST00000498043 TECPR2O15040 1411 aa24.16■■□□□ 1.46
CHRNA4-206ENST00000498043 HNRNPUQ00839 825 aaKnown RBP eCLIP24.15■■□□□ 1.46
CHRNA4-206ENST00000498043 CARD14Q9BXL6 1004 aa24.15■■□□□ 1.46
CHRNA4-206ENST00000498043 MED14O60244 1454 aa24.15■■□□□ 1.46
CHRNA4-206ENST00000498043 PUS7Q96PZ0 661 aaKnown RBP24.15■■□□□ 1.46
CHRNA4-206ENST00000498043 NLRP13Q86W25 1043 aa24.14■■□□□ 1.46
CHRNA4-206ENST00000498043 SLC26A8Q96RN1 970 aa24.14■■□□□ 1.45
CHRNA4-206ENST00000498043 NSD3Q9BZ95 1437 aa24.14■■□□□ 1.45
CHRNA4-206ENST00000498043 NPC1L1Q9UHC9 1359 aa24.12■■□□□ 1.45
CHRNA4-206ENST00000498043 FAM135BQ49AJ0 1406 aa24.11■■□□□ 1.45
CHRNA4-206ENST00000498043 DIP2AQ14689 1571 aa24.11■■□□□ 1.45
CHRNA4-206ENST00000498043 ATAD2Q6PL18 1390 aa24.11■■□□□ 1.45
CHRNA4-206ENST00000498043 USP32Q8NFA0 1604 aa24.1■■□□□ 1.45
CHRNA4-206ENST00000498043 SCAF1Q9H7N4 1312 aaKnown RBP24.09■■□□□ 1.45
CHRNA4-206ENST00000498043 ANKRD36BQ8N2N9 1353 aa24.09■■□□□ 1.45
CHRNA4-206ENST00000498043 ROBO2Q9HCK4 1378 aa24.09■■□□□ 1.45
CHRNA4-206ENST00000498043 CDK19Q9BWU1 502 aa24.09■■□□□ 1.45
CHRNA4-206ENST00000498043 SETD1BQ9UPS6 1966 aaKnown RBP24.08■■□□□ 1.45
CHRNA4-206ENST00000498043 PTPRUQ92729 1446 aa24.08■■□□□ 1.45
CHRNA4-206ENST00000498043 NINLQ9Y2I6 1382 aa24.08■■□□□ 1.45
CHRNA4-206ENST00000498043 PNISRQ8TF01 805 aaKnown RBP24.07■■□□□ 1.44
CHRNA4-206ENST00000498043 A0A1W2PP64 1363 aa24.05■■□□□ 1.44
CHRNA4-206ENST00000498043 SIRT1Q96EB6 747 aa24.04■■□□□ 1.44
CHRNA4-206ENST00000498043 PPP2R1AP30153 589 aa24.04■■□□□ 1.44
CHRNA4-206ENST00000498043 GTF3C3Q9Y5Q9 886 aa24.04■■□□□ 1.44
CHRNA4-206ENST00000498043 TBX22Q9Y458 520 aa24.03■■□□□ 1.44
CHRNA4-206ENST00000498043 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.03■■□□□ 1.44
CHRNA4-206ENST00000498043 CD163L1Q9NR16 1453 aa24.02■■□□□ 1.44
CHRNA4-206ENST00000498043 XRN1Q8IZH2 1706 aaKnown RBP24.02■■□□□ 1.44
CHRNA4-206ENST00000498043 ADGRB2O60241 1585 aa24.01■■□□□ 1.43
CHRNA4-206ENST00000498043 WASLO00401 505 aaPredicted RBP24■■□□□ 1.43
CHRNA4-206ENST00000498043 ANKLE2Q86XL3 938 aa23.99■■□□□ 1.43
CHRNA4-206ENST00000498043 AMOTL2Q9Y2J4 779 aa23.99■■□□□ 1.43
CHRNA4-206ENST00000498043 CGNL1Q0VF96 1302 aa23.99■■□□□ 1.43
CHRNA4-206ENST00000498043 PTCH1Q13635 1447 aa23.99■■□□□ 1.43
CHRNA4-206ENST00000498043 TERF2IPQ9NYB0 399 aa23.97■■□□□ 1.43
CHRNA4-206ENST00000498043 CABP1Q9NZU7 370 aa23.97■■□□□ 1.43
CHRNA4-206ENST00000498043 ATP7BP35670 1465 aa23.95■■□□□ 1.43
CHRNA4-206ENST00000498043 ZBED9Q6R2W3 1325 aa23.95■■□□□ 1.42
CHRNA4-206ENST00000498043 PPIP5K1Q6PFW1 1433 aa23.94■■□□□ 1.42
CHRNA4-206ENST00000498043 HDGFL2Q7Z4V5 671 aaPredicted RBP23.93■■□□□ 1.42
CHRNA4-206ENST00000498043 MORC1Q86VD1 984 aa23.93■■□□□ 1.42
CHRNA4-206ENST00000498043 NSD2O96028 1365 aa23.92■■□□□ 1.42
CHRNA4-206ENST00000498043 KIF20BQ96Q89 1820 aa23.92■■□□□ 1.42
CHRNA4-206ENST00000498043 ANKRD26Q9UPS8 1709 aa23.92■■□□□ 1.42
CHRNA4-206ENST00000498043 SENP3-EIF4A1A0A087X0R7 540 aa23.91■■□□□ 1.42
CHRNA4-206ENST00000498043 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
CHRNA4-206ENST00000498043 TNNT2P45379 298 aaPredicted RBP23.91■■□□□ 1.42
CHRNA4-206ENST00000498043 NUDT16Q96DE0 195 aaKnown RBP23.9■■□□□ 1.42
CHRNA4-206ENST00000498043 CHD2O14647 1828 aaKnown RBP23.9■■□□□ 1.42
CHRNA4-206ENST00000498043 CDC42BPGQ6DT37 1551 aa23.9■■□□□ 1.42
CHRNA4-206ENST00000498043 TOPAZ1Q8N9V7 1692 aa23.9■■□□□ 1.42
CHRNA4-206ENST00000498043 ITSN1Q15811 1721 aa23.9■■□□□ 1.42
CHRNA4-206ENST00000498043 NCKAP5LQ9HCH0 1330 aa23.89■■□□□ 1.42
CHRNA4-206ENST00000498043 KCNA6P17658 529 aa23.89■■□□□ 1.41
CHRNA4-206ENST00000498043 NPHP4O75161 1426 aaPredicted RBP23.89■■□□□ 1.41
CHRNA4-206ENST00000498043 PRR36Q9H6K5 1346 aa23.89■■□□□ 1.41
CHRNA4-206ENST00000498043 MON2Q7Z3U7 1717 aa23.87■■□□□ 1.41
CHRNA4-206ENST00000498043 AKAP12Q02952 1782 aa23.86■■□□□ 1.41
CHRNA4-206ENST00000498043 BLMP54132 1417 aaPredicted RBP23.86■■□□□ 1.41
CHRNA4-206ENST00000498043 GGNBP2Q9H3C7 697 aa23.85■■□□□ 1.41
CHRNA4-206ENST00000498043 CCDC61Q9Y6R9 512 aa23.85■■□□□ 1.41
CHRNA4-206ENST00000498043 CPSF1Q10570 1443 aaKnown RBP23.85■■□□□ 1.41
CHRNA4-206ENST00000498043 NUTM2FA1L443 756 aa23.84■■□□□ 1.41
CHRNA4-206ENST00000498043 WDR43Q15061 677 aaKnown RBP eCLIP23.84■■□□□ 1.41
CHRNA4-206ENST00000498043 FYB1O15117 783 aa23.82■■□□□ 1.4
CHRNA4-206ENST00000498043 NALCNQ8IZF0 1738 aa23.82■■□□□ 1.4
CHRNA4-206ENST00000498043 ADAMTS8Q9UP79 889 aa23.82■■□□□ 1.4
CHRNA4-206ENST00000498043 NKTRP30414 1462 aaKnown RBP23.81■■□□□ 1.4
CHRNA4-206ENST00000498043 EDC4Q6P2E9 1401 aaKnown RBP23.81■■□□□ 1.4
CHRNA4-206ENST00000498043 INSRP06213 1382 aa23.81■■□□□ 1.4
CHRNA4-206ENST00000498043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.81■■□□□ 1.4
CHRNA4-206ENST00000498043 SHPRHQ149N8 1683 aa23.81■■□□□ 1.4
CHRNA4-206ENST00000498043 POLR3AO14802 1390 aaPredicted RBP23.81■■□□□ 1.4
CHRNA4-206ENST00000498043 RGPD8O14715 1765 aaPredicted RBP23.79■■□□□ 1.4
CHRNA4-206ENST00000498043 NRKQ7Z2Y5 1582 aa23.78■■□□□ 1.4
CHRNA4-206ENST00000498043 FMN2Q9NZ56 1722 aa23.78■■□□□ 1.4
CHRNA4-206ENST00000498043 MTHFSP49914 203 aa23.76■■□□□ 1.39
CHRNA4-206ENST00000498043 SALL2Q9Y467 1007 aaPredicted RBP23.75■■□□□ 1.39
CHRNA4-206ENST00000498043 NWD1Q149M9 1564 aa23.75■■□□□ 1.39
CHRNA4-206ENST00000498043 KDM4FA0A1W2PPD8 638 aa23.74■■□□□ 1.39
CHRNA4-206ENST00000498043 RBM33Q96EV2 1170 aaKnown RBP23.73■■□□□ 1.39
CHRNA4-206ENST00000498043 ACEP12821 1306 aa23.73■■□□□ 1.39
CHRNA4-206ENST00000498043 NME9Q86XW9 330 aa23.72■■□□□ 1.39
CHRNA4-206ENST00000498043 PLEKHG3A1L390 1219 aa23.71■■□□□ 1.39
CHRNA4-206ENST00000498043 CFAP53Q96M91 514 aa23.71■■□□□ 1.39
CHRNA4-206ENST00000498043 ZNF692Q9BU19 519 aaPredicted RBP23.71■■□□□ 1.39
CHRNA4-206ENST00000498043 ANKARQ7Z5J8 1434 aa23.7■■□□□ 1.38
CHRNA4-206ENST00000498043 USP6P35125 1406 aa23.7■■□□□ 1.38
CHRNA4-206ENST00000498043 CCDC146Q8IYE0 955 aa23.69■■□□□ 1.38
CHRNA4-206ENST00000498043 SMG6Q86US8 1419 aaKnown RBP23.69■■□□□ 1.38
CHRNA4-206ENST00000498043 HSPA2P54652 639 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms