RNA–Protein interactions for RNA: ENST00000497409.1

ZNF561-221, Transcript of zinc finger protein 561, humanhuman

TSL 2

Gene ZNF561, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-221ENST00000497409 HMX1Q9NP08 348 aaPredicted RBP10.47□□□□□ -0.73
ZNF561-221ENST00000497409 AXIN2Q9Y2T1 843 aa10.47□□□□□ -0.73
ZNF561-221ENST00000497409 CFHP08603 1231 aa10.46□□□□□ -0.73
ZNF561-221ENST00000497409 IRF5Q13568 498 aa10.46□□□□□ -0.73
ZNF561-221ENST00000497409 SAMD7Q7Z3H4 446 aa10.46□□□□□ -0.73
ZNF561-221ENST00000497409 TRIM34Q9BYJ4 488 aa10.46□□□□□ -0.73
ZNF561-221ENST00000497409 VPS9D1Q9Y2B5 631 aa10.46□□□□□ -0.73
ZNF561-221ENST00000497409 PBX2P40425 430 aa10.45□□□□□ -0.74
ZNF561-221ENST00000497409 TSC1Q92574 1164 aa10.45□□□□□ -0.74
ZNF561-221ENST00000497409 CFAP99D6REC4 459 aa10.44□□□□□ -0.74
ZNF561-221ENST00000497409 C6orf229H3BNL8 230 aa10.44□□□□□ -0.74
ZNF561-221ENST00000497409 LAPTM4BQ86VI4 370 aa10.44□□□□□ -0.74
ZNF561-221ENST00000497409 TRAIPQ9BWF2 469 aa10.44□□□□□ -0.74
ZNF561-221ENST00000497409 RB1CC1Q8TDY2 1594 aa10.43□□□□□ -0.74
ZNF561-221ENST00000497409 ZBTB7CA1YPR0 619 aa10.43□□□□□ -0.74
ZNF561-221ENST00000497409 GPR37L1O60883 481 aa10.43□□□□□ -0.74
ZNF561-221ENST00000497409 ATP6V1AP38606 617 aa10.43□□□□□ -0.74
ZNF561-221ENST00000497409 WASHC4Q2M389 1173 aa10.43□□□□□ -0.74
ZNF561-221ENST00000497409 LRRN4Q8WUT4 740 aa10.43□□□□□ -0.74
ZNF561-221ENST00000497409 NECTIN2Q92692 538 aa10.42□□□□□ -0.74
ZNF561-221ENST00000497409 NBPF3Q9H094 633 aa10.42□□□□□ -0.74
ZNF561-221ENST00000497409 RNF40O75150 1001 aa10.41□□□□□ -0.74
ZNF561-221ENST00000497409 PPP1R15AO75807 674 aaPredicted RBP10.41□□□□□ -0.74
ZNF561-221ENST00000497409 HDGFL1Q5TGJ6 251 aa10.4□□□□□ -0.74
ZNF561-221ENST00000497409 RETREG2Q8NC44 543 aa10.4□□□□□ -0.74
ZNF561-221ENST00000497409 ADAMTS19Q8TE59 1207 aa10.4□□□□□ -0.74
ZNF561-221ENST00000497409 SHROOM4Q9ULL8 1493 aa10.4□□□□□ -0.74
ZNF561-221ENST00000497409 BHMG1C9JSJ3 638 aaPredicted RBP10.39□□□□□ -0.75
ZNF561-221ENST00000497409 EMP3P54852 163 aa10.39□□□□□ -0.75
ZNF561-221ENST00000497409 KMT5BQ4FZB7 885 aa10.39□□□□□ -0.75
ZNF561-221ENST00000497409 PRR7Q8TB68 274 aa10.39□□□□□ -0.75
ZNF561-221ENST00000497409 SYMPKQ92797 1274 aaKnown RBP10.39□□□□□ -0.75
ZNF561-221ENST00000497409 ZNF687Q8N1G0 1237 aa10.38□□□□□ -0.75
ZNF561-221ENST00000497409 EPS8L1Q8TE68 723 aa10.38□□□□□ -0.75
ZNF561-221ENST00000497409 ZFRQ96KR1 1074 aaKnown RBP10.38□□□□□ -0.75
ZNF561-221ENST00000497409 ST18O60284 1047 aa10.37□□□□□ -0.75
ZNF561-221ENST00000497409 VAC14Q08AM6 782 aa10.37□□□□□ -0.75
ZNF561-221ENST00000497409 TK2O00142 265 aa10.35□□□□□ -0.75
ZNF561-221ENST00000497409 MORN1Q5T089 497 aa10.35□□□□□ -0.75
ZNF561-221ENST00000497409 RETREG3Q86VR2 466 aa10.35□□□□□ -0.75
ZNF561-221ENST00000497409 KCTD17Q8N5Z5 321 aa10.35□□□□□ -0.75
ZNF561-221ENST00000497409 MARVELD3Q96A59 401 aa10.35□□□□□ -0.75
ZNF561-221ENST00000497409 ACIN1Q9UKV3 1341 aaKnown RBP10.34□□□□□ -0.75
ZNF561-221ENST00000497409 PER1O15534 1290 aaPredicted RBP10.34□□□□□ -0.75
ZNF561-221ENST00000497409 ACTN4O43707 911 aaKnown RBP10.34□□□□□ -0.75
ZNF561-221ENST00000497409 NR6A1Q15406 480 aa10.34□□□□□ -0.75
ZNF561-221ENST00000497409 MRPL50Q8N5N7 158 aaKnown RBP10.34□□□□□ -0.75
ZNF561-221ENST00000497409 FAM205CA6NFA0 338 aa10.33□□□□□ -0.76
ZNF561-221ENST00000497409 Q3C1V9 767 aa10.33□□□□□ -0.76
ZNF561-221ENST00000497409 PUS10Q3MIT2 529 aaKnown RBP10.33□□□□□ -0.76
ZNF561-221ENST00000497409 LRCH3Q96II8 777 aa10.33□□□□□ -0.76
ZNF561-221ENST00000497409 ALG2Q9H553 416 aa10.33□□□□□ -0.76
ZNF561-221ENST00000497409 SLC27A5Q9Y2P5 690 aa10.33□□□□□ -0.76
ZNF561-221ENST00000497409 DESI1Q6ICB0 168 aa10.32□□□□□ -0.76
ZNF561-221ENST00000497409 PBXIP1Q96AQ6 731 aa10.32□□□□□ -0.76
ZNF561-221ENST00000497409 CFAP70Q5T0N1 1121 aa10.31□□□□□ -0.76
ZNF561-221ENST00000497409 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.31□□□□□ -0.76
ZNF561-221ENST00000497409 SCRIBQ14160 1630 aa10.31□□□□□ -0.76
ZNF561-221ENST00000497409 SOX11P35716 441 aa10.3□□□□□ -0.76
ZNF561-221ENST00000497409 PRR14Q9BWN1 585 aa10.3□□□□□ -0.76
ZNF561-221ENST00000497409 PPP1R12CQ9BZL4 782 aa10.3□□□□□ -0.76
ZNF561-221ENST00000497409 RFX1P22670 979 aa10.29□□□□□ -0.76
ZNF561-221ENST00000497409 AEBP1Q8IUX7 1158 aa10.29□□□□□ -0.76
ZNF561-221ENST00000497409 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.28□□□□□ -0.76
ZNF561-221ENST00000497409 PDE4CQ08493 712 aa10.28□□□□□ -0.76
ZNF561-221ENST00000497409 LHX8Q68G74 356 aa10.28□□□□□ -0.76
ZNF561-221ENST00000497409 ADGRD1Q6QNK2 874 aa10.28□□□□□ -0.76
ZNF561-221ENST00000497409 LYPD8Q6UX82 237 aa10.28□□□□□ -0.76
ZNF561-221ENST00000497409 CCDC9Q9Y3X0 531 aaKnown RBP10.28□□□□□ -0.76
ZNF561-221ENST00000497409 SRPK2P78362 688 aaKnown RBP10.27□□□□□ -0.77
ZNF561-221ENST00000497409 RNF19BQ6ZMZ0 732 aa10.27□□□□□ -0.77
ZNF561-221ENST00000497409 PNMA1Q8ND90 353 aa10.27□□□□□ -0.77
ZNF561-221ENST00000497409 POTEB3A0JP26 581 aa10.26□□□□□ -0.77
ZNF561-221ENST00000497409 PALM3A6NDB9 673 aaPredicted RBP10.26□□□□□ -0.77
ZNF561-221ENST00000497409 LSM11P83369 360 aaKnown RBP eCLIP10.26□□□□□ -0.77
ZNF561-221ENST00000497409 BLOC1S3Q6QNY0 202 aa10.26□□□□□ -0.77
ZNF561-221ENST00000497409 POTEBQ6S5H4 581 aa10.26□□□□□ -0.77
ZNF561-221ENST00000497409 HS3ST6Q96QI5 342 aa10.26□□□□□ -0.77
ZNF561-221ENST00000497409 UCN2Q96RP3 112 aa10.26□□□□□ -0.77
ZNF561-221ENST00000497409 HRO43593 1189 aa10.25□□□□□ -0.77
ZNF561-221ENST00000497409 SEMA3FQ13275 785 aa10.25□□□□□ -0.77
ZNF561-221ENST00000497409 ANKK1Q8NFD2 765 aa10.25□□□□□ -0.77
ZNF561-221ENST00000497409 USB1Q9BQ65 265 aaKnown RBP10.25□□□□□ -0.77
ZNF561-221ENST00000497409 SALL2Q9Y467 1007 aaPredicted RBP10.25□□□□□ -0.77
ZNF561-221ENST00000497409 BRICD5Q6PL45 260 aa10.24□□□□□ -0.77
ZNF561-221ENST00000497409 LMOD1P29536 600 aaPredicted RBP10.23□□□□□ -0.77
ZNF561-221ENST00000497409 EIF4G2P78344 907 aaKnown RBP eCLIP10.23□□□□□ -0.77
ZNF561-221ENST00000497409 TFIP11Q9UBB9 837 aaKnown RBP10.23□□□□□ -0.77
ZNF561-221ENST00000497409 HPS5Q9UPZ3 1129 aa10.23□□□□□ -0.77
ZNF561-221ENST00000497409 SOWAHBA6NEL2 793 aa10.22□□□□□ -0.77
ZNF561-221ENST00000497409 APLP1P51693 650 aa10.22□□□□□ -0.77
ZNF561-221ENST00000497409 PPP4CP60510 307 aa10.22□□□□□ -0.77
ZNF561-221ENST00000497409 NR1H3Q13133 447 aa10.22□□□□□ -0.77
ZNF561-221ENST00000497409 USTQ9Y2C2 406 aa10.22□□□□□ -0.77
ZNF561-221ENST00000497409 GOLGA8CPA6NN73 597 aa10.21□□□□□ -0.77
ZNF561-221ENST00000497409 CSB-PGBD3P0DP91 1061 aa10.21□□□□□ -0.77
ZNF561-221ENST00000497409 SCUBE3Q8IX30 993 aa10.21□□□□□ -0.77
ZNF561-221ENST00000497409 NR1I2O75469 434 aa10.2□□□□□ -0.78
ZNF561-221ENST00000497409 FMNL1O95466 1100 aaPredicted RBP10.2□□□□□ -0.78
ZNF561-221ENST00000497409 F12P00748 615 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms