RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 NRXN1Q9ULB1 1477 aa7.8□□□□□ -1.16
SRPRB-205ENST00000494297 PPLO60437 1756 aa7.79□□□□□ -1.16
SRPRB-205ENST00000494297 PIK3C2GO75747 1445 aa7.79□□□□□ -1.16
SRPRB-205ENST00000494297 PTPRUQ92729 1446 aa7.79□□□□□ -1.16
SRPRB-205ENST00000494297 NCOA3Q9Y6Q9 1424 aa7.79□□□□□ -1.16
SRPRB-205ENST00000494297 ALKQ9UM73 1620 aa7.79□□□□□ -1.16
SRPRB-205ENST00000494297 PROSER2Q86WR7 435 aaPredicted RBP7.79□□□□□ -1.16
SRPRB-205ENST00000494297 KDM2AQ9Y2K7 1162 aa7.79□□□□□ -1.16
SRPRB-205ENST00000494297 NWD1Q149M9 1564 aa7.79□□□□□ -1.16
SRPRB-205ENST00000494297 CLSPNQ9HAW4 1339 aa7.78□□□□□ -1.16
SRPRB-205ENST00000494297 IFT172Q9UG01 1749 aa7.78□□□□□ -1.16
SRPRB-205ENST00000494297 NEUROD1Q13562 356 aa7.78□□□□□ -1.16
SRPRB-205ENST00000494297 CFAP70Q5T0N1 1121 aa7.78□□□□□ -1.16
SRPRB-205ENST00000494297 L3MBTL2Q969R5 705 aa7.78□□□□□ -1.16
SRPRB-205ENST00000494297 SIRT1Q96EB6 747 aa7.78□□□□□ -1.16
SRPRB-205ENST00000494297 NKTRP30414 1462 aaKnown RBP7.78□□□□□ -1.16
SRPRB-205ENST00000494297 STRCP1A6NGW2 1772 aa7.78□□□□□ -1.16
SRPRB-205ENST00000494297 TMEM94Q12767 1356 aa7.77□□□□□ -1.17
SRPRB-205ENST00000494297 TOM1O60784 492 aa7.77□□□□□ -1.17
SRPRB-205ENST00000494297 CHD2O14647 1828 aaKnown RBP7.77□□□□□ -1.17
SRPRB-205ENST00000494297 PRAG1Q86YV5 1406 aa7.77□□□□□ -1.17
SRPRB-205ENST00000494297 ABCC11Q96J66 1382 aa7.76□□□□□ -1.17
SRPRB-205ENST00000494297 POTEMA6NI47 508 aa7.76□□□□□ -1.17
SRPRB-205ENST00000494297 TMEM132EQ6IEE7 984 aa7.76□□□□□ -1.17
SRPRB-205ENST00000494297 C19orf44Q9H6X5 657 aa7.76□□□□□ -1.17
SRPRB-205ENST00000494297 LRPPRCP42704 1394 aaKnown RBP7.75□□□□□ -1.17
SRPRB-205ENST00000494297 ILDR1Q86SU0 546 aaPredicted RBP7.75□□□□□ -1.17
SRPRB-205ENST00000494297 RBM33Q96EV2 1170 aaKnown RBP7.75□□□□□ -1.17
SRPRB-205ENST00000494297 TIMELESSQ9UNS1 1208 aa7.75□□□□□ -1.17
SRPRB-205ENST00000494297 SETD1AO15047 1707 aaKnown RBP7.75□□□□□ -1.17
SRPRB-205ENST00000494297 SPDYE4A6NLX3 237 aa7.74□□□□□ -1.17
SRPRB-205ENST00000494297 UBAP1LF5GYI3 381 aa7.74□□□□□ -1.17
SRPRB-205ENST00000494297 TECPR2O15040 1411 aa7.74□□□□□ -1.17
SRPRB-205ENST00000494297 PTCH1Q13635 1447 aa7.74□□□□□ -1.17
SRPRB-205ENST00000494297 XRN1Q8IZH2 1706 aaKnown RBP7.74□□□□□ -1.17
SRPRB-205ENST00000494297 MSH6P52701 1360 aa7.73□□□□□ -1.17
SRPRB-205ENST00000494297 ROBO2Q9HCK4 1378 aa7.73□□□□□ -1.17
SRPRB-205ENST00000494297 YTHDC2Q9H6S0 1430 aaKnown RBP7.73□□□□□ -1.17
SRPRB-205ENST00000494297 CADPS2Q86UW7 1296 aa7.73□□□□□ -1.17
SRPRB-205ENST00000494297 STK26Q9P289 416 aa7.73□□□□□ -1.17
SRPRB-205ENST00000494297 FAM135BQ49AJ0 1406 aa7.72□□□□□ -1.17
SRPRB-205ENST00000494297 LAMC1P11047 1609 aa7.72□□□□□ -1.17
SRPRB-205ENST00000494297 WAPLQ7Z5K2 1190 aa7.72□□□□□ -1.17
SRPRB-205ENST00000494297 SLAIN2Q9P270 581 aa7.72□□□□□ -1.17
SRPRB-205ENST00000494297 ASXL1Q8IXJ9 1541 aa7.72□□□□□ -1.17
SRPRB-205ENST00000494297 TONSLQ96HA7 1378 aa7.71□□□□□ -1.17
SRPRB-205ENST00000494297 ADGRB1O14514 1584 aa7.71□□□□□ -1.17
SRPRB-205ENST00000494297 XIRP1Q702N8 1843 aaKnown RBP7.71□□□□□ -1.17
SRPRB-205ENST00000494297 DCCP43146 1447 aa7.71□□□□□ -1.17
SRPRB-205ENST00000494297 CD44P16070 742 aaKnown RBP7.71□□□□□ -1.18
SRPRB-205ENST00000494297 ATF3P18847 181 aa7.71□□□□□ -1.18
SRPRB-205ENST00000494297 NBPF1Q3BBV0 1214 aa7.71□□□□□ -1.18
SRPRB-205ENST00000494297 NBPF8Q3BBV2 869 aa7.71□□□□□ -1.18
SRPRB-205ENST00000494297 POTEGQ6S5H5 508 aa7.71□□□□□ -1.18
SRPRB-205ENST00000494297 C14orf37Q86TY3 774 aa7.71□□□□□ -1.18
SRPRB-205ENST00000494297 CCER1Q8TC90 406 aaPredicted RBP7.71□□□□□ -1.18
SRPRB-205ENST00000494297 FARP1Q9Y4F1 1045 aaPredicted RBP7.71□□□□□ -1.18
SRPRB-205ENST00000494297 DLC1Q96QB1 1528 aa7.7□□□□□ -1.18
SRPRB-205ENST00000494297 PIP4K2BP78356 416 aa7.7□□□□□ -1.18
SRPRB-205ENST00000494297 PRAM1Q96QH2 718 aa7.7□□□□□ -1.18
SRPRB-205ENST00000494297 TRAK1Q9UPV9 953 aa7.7□□□□□ -1.18
SRPRB-205ENST00000494297 ADGRL3Q9HAR2 1447 aa7.69□□□□□ -1.18
SRPRB-205ENST00000494297 KIAA1210Q9ULL0 1709 aa7.69□□□□□ -1.18
SRPRB-205ENST00000494297 OTUD5Q96G74 571 aa7.69□□□□□ -1.18
SRPRB-205ENST00000494297 PLEKHH1Q9ULM0 1364 aa7.69□□□□□ -1.18
SRPRB-205ENST00000494297 POGKQ9P215 609 aa7.68□□□□□ -1.18
SRPRB-205ENST00000494297 PCDH10Q9P2E7 1040 aa7.68□□□□□ -1.18
SRPRB-205ENST00000494297 KNDC1Q76NI1 1749 aa7.68□□□□□ -1.18
SRPRB-205ENST00000494297 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.67□□□□□ -1.18
SRPRB-205ENST00000494297 ROCK2O75116 1388 aaKnown RBP7.67□□□□□ -1.18
SRPRB-205ENST00000494297 GPRASP1Q5JY77 1395 aa7.67□□□□□ -1.18
SRPRB-205ENST00000494297 MST1RQ04912 1400 aa7.67□□□□□ -1.18
SRPRB-205ENST00000494297 BRINP3Q76B58 766 aa7.66□□□□□ -1.18
SRPRB-205ENST00000494297 WASLO00401 505 aaPredicted RBP7.65□□□□□ -1.18
SRPRB-205ENST00000494297 HSPA1LP34931 641 aa7.65□□□□□ -1.18
SRPRB-205ENST00000494297 SAFB2Q14151 953 aaKnown RBP eCLIP7.65□□□□□ -1.18
SRPRB-205ENST00000494297 C1orf167Q5SNV9 1468 aa7.65□□□□□ -1.18
SRPRB-205ENST00000494297 TRPM1Q7Z4N2 1603 aa7.65□□□□□ -1.18
SRPRB-205ENST00000494297 CARD11Q9BXL7 1154 aa7.65□□□□□ -1.18
SRPRB-205ENST00000494297 NALCNQ8IZF0 1738 aa7.64□□□□□ -1.19
SRPRB-205ENST00000494297 CDC42BPGQ6DT37 1551 aa7.64□□□□□ -1.19
SRPRB-205ENST00000494297 RALGAPBQ86X10 1494 aa7.64□□□□□ -1.19
SRPRB-205ENST00000494297 CENPJQ9HC77 1338 aaPredicted RBP7.64□□□□□ -1.19
SRPRB-205ENST00000494297 ORAI2Q96SN7 254 aa7.64□□□□□ -1.19
SRPRB-205ENST00000494297 MINK1Q8N4C8 1332 aaPredicted RBP7.63□□□□□ -1.19
SRPRB-205ENST00000494297 CLCN6P51797 869 aa7.63□□□□□ -1.19
SRPRB-205ENST00000494297 ESCO1Q5FWF5 840 aa7.63□□□□□ -1.19
SRPRB-205ENST00000494297 HIRIP3Q9BW71 556 aaPredicted RBP7.63□□□□□ -1.19
SRPRB-205ENST00000494297 ANKARQ7Z5J8 1434 aa7.62□□□□□ -1.19
SRPRB-205ENST00000494297 EIF3AQ14152 1382 aaKnown RBP7.62□□□□□ -1.19
SRPRB-205ENST00000494297 NUTM2FA1L443 756 aa7.62□□□□□ -1.19
SRPRB-205ENST00000494297 SLC24A1O60721 1099 aa7.62□□□□□ -1.19
SRPRB-205ENST00000494297 CDK19Q9BWU1 502 aa7.62□□□□□ -1.19
SRPRB-205ENST00000494297 CREBZFQ9NS37 354 aa7.62□□□□□ -1.19
SRPRB-205ENST00000494297 ZRANB1Q9UGI0 708 aa7.62□□□□□ -1.19
SRPRB-205ENST00000494297 ROBO1Q9Y6N7 1651 aa7.62□□□□□ -1.19
SRPRB-205ENST00000494297 ADGRB2O60241 1585 aa7.62□□□□□ -1.19
SRPRB-205ENST00000494297 ARHGEF28Q8N1W1 1705 aaKnown RBP7.61□□□□□ -1.19
SRPRB-205ENST00000494297 SBNO2Q9Y2G9 1366 aa7.61□□□□□ -1.19
SRPRB-205ENST00000494297 SOS2Q07890 1332 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms