RNA–Protein interactions for RNA: ENST00000494227.3

RN7SL538P-201, Transcript of RNA, 7SL, cytoplasmic 538, pseudogene, humanhuman

BASIC

Gene RN7SL538P, Length 304 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL538P-201ENST00000494227 NBPF1Q3BBV0 1214 aa12.74□□□□□ -0.37
RN7SL538P-201ENST00000494227 PRAG1Q86YV5 1406 aa12.73□□□□□ -0.37
RN7SL538P-201ENST00000494227 SPATA31A6Q5VVP1 1343 aa12.73□□□□□ -0.37
RN7SL538P-201ENST00000494227 MEX3CQ5U5Q3 659 aaKnown RBP12.73□□□□□ -0.37
RN7SL538P-201ENST00000494227 CDK12Q9NYV4 1490 aaPredicted RBP12.72□□□□□ -0.37
RN7SL538P-201ENST00000494227 ADGRF5Q8IZF2 1346 aa12.72□□□□□ -0.37
RN7SL538P-201ENST00000494227 ZBTB22O15209 634 aa12.72□□□□□ -0.37
RN7SL538P-201ENST00000494227 SAMD1Q6SPF0 538 aaPredicted RBP12.72□□□□□ -0.37
RN7SL538P-201ENST00000494227 MST1RQ04912 1400 aa12.71□□□□□ -0.37
RN7SL538P-201ENST00000494227 BRINP3Q76B58 766 aa12.71□□□□□ -0.37
RN7SL538P-201ENST00000494227 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
RN7SL538P-201ENST00000494227 SETBP1Q9Y6X0 1596 aa12.7□□□□□ -0.38
RN7SL538P-201ENST00000494227 EIF4G2P78344 907 aaKnown RBP eCLIP12.7□□□□□ -0.38
RN7SL538P-201ENST00000494227 C14orf37Q86TY3 774 aa12.7□□□□□ -0.38
RN7SL538P-201ENST00000494227 NCOA3Q9Y6Q9 1424 aa12.7□□□□□ -0.38
RN7SL538P-201ENST00000494227 AFF2P51816 1311 aa12.69□□□□□ -0.38
RN7SL538P-201ENST00000494227 RPGRIP1LQ68CZ1 1315 aa12.69□□□□□ -0.38
RN7SL538P-201ENST00000494227 NUTM2BA6NNL0 878 aaPredicted RBP12.69□□□□□ -0.38
RN7SL538P-201ENST00000494227 NUTM2EB1AL46 878 aaPredicted RBP12.69□□□□□ -0.38
RN7SL538P-201ENST00000494227 NUTM2AQ8IVF1 878 aaPredicted RBP12.69□□□□□ -0.38
RN7SL538P-201ENST00000494227 STAC3Q96MF2 364 aa12.69□□□□□ -0.38
RN7SL538P-201ENST00000494227 RALGAPBQ86X10 1494 aa12.68□□□□□ -0.38
RN7SL538P-201ENST00000494227 C11orf95C9JLR9 678 aaPredicted RBP12.68□□□□□ -0.38
RN7SL538P-201ENST00000494227 ZNF772Q68DY9 489 aaPredicted RBP12.68□□□□□ -0.38
RN7SL538P-201ENST00000494227 DDX17Q92841 729 aaKnown RBP12.68□□□□□ -0.38
RN7SL538P-201ENST00000494227 CARD11Q9BXL7 1154 aa12.68□□□□□ -0.38
RN7SL538P-201ENST00000494227 DCCP43146 1447 aa12.68□□□□□ -0.38
RN7SL538P-201ENST00000494227 CFAP70Q5T0N1 1121 aa12.67□□□□□ -0.38
RN7SL538P-201ENST00000494227 PNPLA6Q8IY17 1366 aa12.67□□□□□ -0.38
RN7SL538P-201ENST00000494227 TBX22Q9Y458 520 aa12.66□□□□□ -0.38
RN7SL538P-201ENST00000494227 GPRASP1Q5JY77 1395 aa12.66□□□□□ -0.38
RN7SL538P-201ENST00000494227 LAMC1P11047 1609 aa12.66□□□□□ -0.38
RN7SL538P-201ENST00000494227 RXRBP28702 533 aa12.65□□□□□ -0.38
RN7SL538P-201ENST00000494227 DIEXFQ68CQ4 756 aaKnown RBP12.65□□□□□ -0.38
RN7SL538P-201ENST00000494227 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
RN7SL538P-201ENST00000494227 ROCK2O75116 1388 aaKnown RBP12.65□□□□□ -0.38
RN7SL538P-201ENST00000494227 PIK3R4Q99570 1358 aa12.65□□□□□ -0.38
RN7SL538P-201ENST00000494227 ADGRL3Q9HAR2 1447 aa12.64□□□□□ -0.39
RN7SL538P-201ENST00000494227 NEXMIFQ5QGS0 1516 aa12.64□□□□□ -0.39
RN7SL538P-201ENST00000494227 ATF3P18847 181 aa12.64□□□□□ -0.39
RN7SL538P-201ENST00000494227 C19orf44Q9H6X5 657 aa12.64□□□□□ -0.39
RN7SL538P-201ENST00000494227 METP08581 1390 aa12.64□□□□□ -0.39
RN7SL538P-201ENST00000494227 USP47Q96K76 1375 aa12.64□□□□□ -0.39
RN7SL538P-201ENST00000494227 NRXN1Q9ULB1 1477 aa12.64□□□□□ -0.39
RN7SL538P-201ENST00000494227 ST20-MTHFSA0A0A6YYL1 179 aa12.63□□□□□ -0.39
RN7SL538P-201ENST00000494227 VGFO15240 615 aaPredicted RBP12.63□□□□□ -0.39
RN7SL538P-201ENST00000494227 CAPN15O75808 1086 aa12.63□□□□□ -0.39
RN7SL538P-201ENST00000494227 C8orf37Q96NL8 207 aa12.63□□□□□ -0.39
RN7SL538P-201ENST00000494227 C14orf93Q9H972 538 aaKnown RBP12.63□□□□□ -0.39
RN7SL538P-201ENST00000494227 MYOM2P54296 1465 aa12.63□□□□□ -0.39
RN7SL538P-201ENST00000494227 AMOTL2Q9Y2J4 779 aa12.62□□□□□ -0.39
RN7SL538P-201ENST00000494227 DDX10Q13206 875 aaKnown RBP12.61□□□□□ -0.39
RN7SL538P-201ENST00000494227 COL22A1Q8NFW1 1626 aaPredicted RBP12.61□□□□□ -0.39
RN7SL538P-201ENST00000494227 WASHC2AQ641Q2 1341 aa12.61□□□□□ -0.39
RN7SL538P-201ENST00000494227 TMEM132EQ6IEE7 984 aa12.6□□□□□ -0.39
RN7SL538P-201ENST00000494227 KIF1BO60333 1816 aa12.6□□□□□ -0.39
RN7SL538P-201ENST00000494227 MARF1Q9Y4F3 1742 aaKnown RBP12.59□□□□□ -0.39
RN7SL538P-201ENST00000494227 TRPM1Q7Z4N2 1603 aa12.59□□□□□ -0.39
RN7SL538P-201ENST00000494227 PIK3C2GO75747 1445 aa12.59□□□□□ -0.39
RN7SL538P-201ENST00000494227 C1orf167Q5SNV9 1468 aa12.59□□□□□ -0.39
RN7SL538P-201ENST00000494227 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.58□□□□□ -0.4
RN7SL538P-201ENST00000494227 ADAMTS2O95450 1211 aa12.57□□□□□ -0.4
RN7SL538P-201ENST00000494227 TESK2Q96S53 571 aa12.57□□□□□ -0.4
RN7SL538P-201ENST00000494227 ZNF219Q9P2Y4 722 aaPredicted RBP12.57□□□□□ -0.4
RN7SL538P-201ENST00000494227 KIF7Q2M1P5 1343 aa12.57□□□□□ -0.4
RN7SL538P-201ENST00000494227 DSG3P32926 999 aa12.56□□□□□ -0.4
RN7SL538P-201ENST00000494227 CCDC7Q96M83 1385 aa12.56□□□□□ -0.4
RN7SL538P-201ENST00000494227 ATRNO75882 1429 aa12.55□□□□□ -0.4
RN7SL538P-201ENST00000494227 PTCH1Q13635 1447 aa12.55□□□□□ -0.4
RN7SL538P-201ENST00000494227 IFT172Q9UG01 1749 aa12.55□□□□□ -0.4
RN7SL538P-201ENST00000494227 RBM6P78332 1123 aaKnown RBP12.55□□□□□ -0.4
RN7SL538P-201ENST00000494227 QTRT2Q9H974 415 aaKnown RBP12.55□□□□□ -0.4
RN7SL538P-201ENST00000494227 ROBO2Q9HCK4 1378 aa12.55□□□□□ -0.4
RN7SL538P-201ENST00000494227 PPLO60437 1756 aa12.54□□□□□ -0.4
RN7SL538P-201ENST00000494227 MIER1Q8N108 512 aa12.54□□□□□ -0.4
RN7SL538P-201ENST00000494227 ATAD2Q6PL18 1390 aa12.54□□□□□ -0.4
RN7SL538P-201ENST00000494227 BRWD3Q6RI45 1802 aa12.53□□□□□ -0.4
RN7SL538P-201ENST00000494227 GLI3P10071 1580 aa12.53□□□□□ -0.4
RN7SL538P-201ENST00000494227 TRAK1Q9UPV9 953 aa12.53□□□□□ -0.4
RN7SL538P-201ENST00000494227 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.53□□□□□ -0.4
RN7SL538P-201ENST00000494227 PXDNQ92626 1479 aa12.53□□□□□ -0.4
RN7SL538P-201ENST00000494227 ADGRB1O14514 1584 aa12.52□□□□□ -0.4
RN7SL538P-201ENST00000494227 CDC42BPGQ6DT37 1551 aa12.52□□□□□ -0.4
RN7SL538P-201ENST00000494227 HDGFP51858 240 aaKnown RBP12.52□□□□□ -0.41
RN7SL538P-201ENST00000494227 LRRC59Q96AG4 307 aaKnown RBP12.51□□□□□ -0.41
RN7SL538P-201ENST00000494227 ORAI2Q96SN7 254 aa12.51□□□□□ -0.41
RN7SL538P-201ENST00000494227 POLR3GLQ9BT43 218 aa12.51□□□□□ -0.41
RN7SL538P-201ENST00000494227 STK26Q9P289 416 aa12.51□□□□□ -0.41
RN7SL538P-201ENST00000494227 BCL9LQ86UU0 1499 aa12.51□□□□□ -0.41
RN7SL538P-201ENST00000494227 SOS2Q07890 1332 aaPredicted RBP12.5□□□□□ -0.41
RN7SL538P-201ENST00000494227 ABCA3Q99758 1704 aa12.5□□□□□ -0.41
RN7SL538P-201ENST00000494227 NGLY1Q96IV0 654 aa12.49□□□□□ -0.41
RN7SL538P-201ENST00000494227 KIAA1210Q9ULL0 1709 aa12.48□□□□□ -0.41
RN7SL538P-201ENST00000494227 PLCH1Q4KWH8 1693 aa12.48□□□□□ -0.41
RN7SL538P-201ENST00000494227 USP21Q9UK80 565 aa12.48□□□□□ -0.41
RN7SL538P-201ENST00000494227 USP32Q8NFA0 1604 aa12.48□□□□□ -0.41
RN7SL538P-201ENST00000494227 LRP5O75197 1615 aa12.47□□□□□ -0.41
RN7SL538P-201ENST00000494227 CENPJQ9HC77 1338 aaPredicted RBP12.46□□□□□ -0.41
RN7SL538P-201ENST00000494227 TMF1P82094 1093 aa12.46□□□□□ -0.41
RN7SL538P-201ENST00000494227 YTHDC2Q9H6S0 1430 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms