RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 TBC1D2BQ9UPU7 963 aa11.25□□□□□ -0.61
SMC2-205ENST00000493955 ARHGAP33O14559 1287 aa11.24□□□□□ -0.61
SMC2-205ENST00000493955 SLC4A3P48751 1232 aa11.24□□□□□ -0.61
SMC2-205ENST00000493955 HDGFP51858 240 aaKnown RBP11.23□□□□□ -0.61
SMC2-205ENST00000493955 PCDHGC3Q9UN70 934 aa11.23□□□□□ -0.61
SMC2-205ENST00000493955 GUCA2AQ02747 115 aa11.21□□□□□ -0.61
SMC2-205ENST00000493955 FAM98CQ17RN3 349 aaKnown RBP11.21□□□□□ -0.61
SMC2-205ENST00000493955 MTMR2Q13614 643 aa11.2□□□□□ -0.62
SMC2-205ENST00000493955 HLA-CQ95604 372 aa11.2□□□□□ -0.62
SMC2-205ENST00000493955 NDUFB9Q9Y6M9 179 aa11.2□□□□□ -0.62
SMC2-205ENST00000493955 GRIPAP1Q4V328 841 aa11.19□□□□□ -0.62
SMC2-205ENST00000493955 ADGRD1Q6QNK2 874 aa11.19□□□□□ -0.62
SMC2-205ENST00000493955 SLF2Q8IX21 1173 aa11.19□□□□□ -0.62
SMC2-205ENST00000493955 HELBQ8NG08 1087 aaPredicted RBP11.19□□□□□ -0.62
SMC2-205ENST00000493955 GJD4Q96KN9 370 aaPredicted RBP11.19□□□□□ -0.62
SMC2-205ENST00000493955 DMRTA1Q5VZB9 504 aa11.18□□□□□ -0.62
SMC2-205ENST00000493955 CALR3Q96L12 384 aaKnown RBP11.18□□□□□ -0.62
SMC2-205ENST00000493955 POM121CA8CG34 1229 aa11.17□□□□□ -0.62
SMC2-205ENST00000493955 FUT2Q10981 343 aa11.17□□□□□ -0.62
SMC2-205ENST00000493955 GLMNQ92990 594 aa11.17□□□□□ -0.62
SMC2-205ENST00000493955 CFHP08603 1231 aa11.16□□□□□ -0.62
SMC2-205ENST00000493955 CTDSPL2Q05D32 466 aa11.16□□□□□ -0.62
SMC2-205ENST00000493955 SAMD7Q7Z3H4 446 aa11.16□□□□□ -0.62
SMC2-205ENST00000493955 HMX1Q9NP08 348 aaPredicted RBP11.16□□□□□ -0.62
SMC2-205ENST00000493955 VPS9D1Q9Y2B5 631 aa11.16□□□□□ -0.62
SMC2-205ENST00000493955 LAPTM4BQ86VI4 370 aa11.15□□□□□ -0.62
SMC2-205ENST00000493955 NBPF3Q9H094 633 aa11.15□□□□□ -0.62
SMC2-205ENST00000493955 C6orf229H3BNL8 230 aa11.14□□□□□ -0.63
SMC2-205ENST00000493955 TSC1Q92574 1164 aa11.14□□□□□ -0.63
SMC2-205ENST00000493955 CFAP99D6REC4 459 aa11.13□□□□□ -0.63
SMC2-205ENST00000493955 IRF5Q13568 498 aa11.13□□□□□ -0.63
SMC2-205ENST00000493955 TRIM34Q9BYJ4 488 aa11.13□□□□□ -0.63
SMC2-205ENST00000493955 RNF40O75150 1001 aa11.12□□□□□ -0.63
SMC2-205ENST00000493955 ATP6V1AP38606 617 aa11.12□□□□□ -0.63
SMC2-205ENST00000493955 WASHC4Q2M389 1173 aa11.12□□□□□ -0.63
SMC2-205ENST00000493955 ZBTB7CA1YPR0 619 aa11.11□□□□□ -0.63
SMC2-205ENST00000493955 GPR37L1O60883 481 aa11.1□□□□□ -0.63
SMC2-205ENST00000493955 LRRN4Q8WUT4 740 aa11.1□□□□□ -0.63
SMC2-205ENST00000493955 TRAIPQ9BWF2 469 aa11.1□□□□□ -0.63
SMC2-205ENST00000493955 PPP1R15AO75807 674 aaPredicted RBP11.09□□□□□ -0.63
SMC2-205ENST00000493955 KMT5BQ4FZB7 885 aa11.09□□□□□ -0.63
SMC2-205ENST00000493955 BHMG1C9JSJ3 638 aaPredicted RBP11.08□□□□□ -0.64
SMC2-205ENST00000493955 TK2O00142 265 aa11.08□□□□□ -0.64
SMC2-205ENST00000493955 HRO43593 1189 aa11.08□□□□□ -0.64
SMC2-205ENST00000493955 NECTIN2Q92692 538 aa11.08□□□□□ -0.64
SMC2-205ENST00000493955 ZFRQ96KR1 1074 aaKnown RBP11.08□□□□□ -0.64
SMC2-205ENST00000493955 HDGFL1Q5TGJ6 251 aa11.07□□□□□ -0.64
SMC2-205ENST00000493955 RETREG2Q8NC44 543 aa11.07□□□□□ -0.64
SMC2-205ENST00000493955 PRR7Q8TB68 274 aa11.07□□□□□ -0.64
SMC2-205ENST00000493955 KCTD12Q96CX2 325 aaKnown RBP11.07□□□□□ -0.64
SMC2-205ENST00000493955 ADAMTS19Q8TE59 1207 aa11.06□□□□□ -0.64
SMC2-205ENST00000493955 SYMPKQ92797 1274 aaKnown RBP11.06□□□□□ -0.64
SMC2-205ENST00000493955 RETREG3Q86VR2 466 aa11.05□□□□□ -0.64
SMC2-205ENST00000493955 VAC14Q08AM6 782 aa11.04□□□□□ -0.64
SMC2-205ENST00000493955 MRPL50Q8N5N7 158 aaKnown RBP11.04□□□□□ -0.64
SMC2-205ENST00000493955 EPS8L1Q8TE68 723 aa11.04□□□□□ -0.64
SMC2-205ENST00000493955 MORN1Q5T089 497 aa11.03□□□□□ -0.64
SMC2-205ENST00000493955 LRCH3Q96II8 777 aa11.03□□□□□ -0.64
SMC2-205ENST00000493955 STAC3Q96MF2 364 aa11.03□□□□□ -0.64
SMC2-205ENST00000493955 ACTN4O43707 911 aaKnown RBP11.02□□□□□ -0.64
SMC2-205ENST00000493955 Q3C1V9 767 aa11.02□□□□□ -0.64
SMC2-205ENST00000493955 KCTD17Q8N5Z5 321 aa11.02□□□□□ -0.64
SMC2-205ENST00000493955 DESI1Q6ICB0 168 aa11.01□□□□□ -0.65
SMC2-205ENST00000493955 PRR14Q9BWN1 585 aa11.01□□□□□ -0.65
SMC2-205ENST00000493955 ACIN1Q9UKV3 1341 aaKnown RBP11.01□□□□□ -0.65
SMC2-205ENST00000493955 PER1O15534 1290 aaPredicted RBP11.01□□□□□ -0.65
SMC2-205ENST00000493955 NR6A1Q15406 480 aa11.01□□□□□ -0.65
SMC2-205ENST00000493955 PUS10Q3MIT2 529 aaKnown RBP11.01□□□□□ -0.65
SMC2-205ENST00000493955 PBXIP1Q96AQ6 731 aa11.01□□□□□ -0.65
SMC2-205ENST00000493955 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.01□□□□□ -0.65
SMC2-205ENST00000493955 SLC27A5Q9Y2P5 690 aa11.01□□□□□ -0.65
SMC2-205ENST00000493955 SOX11P35716 441 aa10.99□□□□□ -0.65
SMC2-205ENST00000493955 ALG2Q9H553 416 aa10.99□□□□□ -0.65
SMC2-205ENST00000493955 CFAP70Q5T0N1 1121 aa10.98□□□□□ -0.65
SMC2-205ENST00000493955 PDE4CQ08493 712 aa10.97□□□□□ -0.65
SMC2-205ENST00000493955 PNMA1Q8ND90 353 aa10.97□□□□□ -0.65
SMC2-205ENST00000493955 PPP1R12CQ9BZL4 782 aa10.97□□□□□ -0.65
SMC2-205ENST00000493955 PTPN5P54829 565 aa10.96□□□□□ -0.65
SMC2-205ENST00000493955 RFX1P22670 979 aa10.95□□□□□ -0.66
SMC2-205ENST00000493955 LYPD8Q6UX82 237 aa10.95□□□□□ -0.66
SMC2-205ENST00000493955 AEBP1Q8IUX7 1158 aa10.95□□□□□ -0.66
SMC2-205ENST00000493955 CCDC9Q9Y3X0 531 aaKnown RBP10.95□□□□□ -0.66
SMC2-205ENST00000493955 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.94□□□□□ -0.66
SMC2-205ENST00000493955 RNF19BQ6ZMZ0 732 aa10.94□□□□□ -0.66
SMC2-205ENST00000493955 ANKK1Q8NFD2 765 aa10.94□□□□□ -0.66
SMC2-205ENST00000493955 PALM3A6NDB9 673 aaPredicted RBP10.93□□□□□ -0.66
SMC2-205ENST00000493955 BLOC1S3Q6QNY0 202 aa10.93□□□□□ -0.66
SMC2-205ENST00000493955 USB1Q9BQ65 265 aaKnown RBP10.93□□□□□ -0.66
SMC2-205ENST00000493955 SALL2Q9Y467 1007 aaPredicted RBP10.93□□□□□ -0.66
SMC2-205ENST00000493955 SEMA3FQ13275 785 aa10.92□□□□□ -0.66
SMC2-205ENST00000493955 UCN2Q96RP3 112 aa10.92□□□□□ -0.66
SMC2-205ENST00000493955 PPP4CP60510 307 aa10.92□□□□□ -0.66
SMC2-205ENST00000493955 SOWAHBA6NEL2 793 aa10.91□□□□□ -0.66
SMC2-205ENST00000493955 GOLGA8CPA6NN73 597 aa10.91□□□□□ -0.66
SMC2-205ENST00000493955 EIF4G2P78344 907 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMC2-205ENST00000493955 SRPK2P78362 688 aaKnown RBP10.91□□□□□ -0.66
SMC2-205ENST00000493955 BRICD5Q6PL45 260 aa10.91□□□□□ -0.66
SMC2-205ENST00000493955 HPS5Q9UPZ3 1129 aa10.91□□□□□ -0.66
SMC2-205ENST00000493955 LMOD1P29536 600 aaPredicted RBP10.9□□□□□ -0.66
SMC2-205ENST00000493955 APLP1P51693 650 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms