RNA–Protein interactions for RNA: ENST00000493116.5

SOX2-OT-214, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 560 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-214ENST00000493116 RSF1Q96T23 1441 aaPredicted RBP8.82□□□□□ -1
SOX2-OT-214ENST00000493116 KDM4AO75164 1064 aa8.82□□□□□ -1
SOX2-OT-214ENST00000493116 BRD1O95696 1058 aa8.82□□□□□ -1
SOX2-OT-214ENST00000493116 QPCTQ16769 361 aa8.82□□□□□ -1
SOX2-OT-214ENST00000493116 RTL5Q5HYW3 569 aaPredicted RBP8.82□□□□□ -1
SOX2-OT-214ENST00000493116 DMRTA1Q5VZB9 504 aa8.82□□□□□ -1
SOX2-OT-214ENST00000493116 NUDT18Q6ZVK8 323 aa8.82□□□□□ -1
SOX2-OT-214ENST00000493116 TATDN2Q93075 761 aa8.82□□□□□ -1
SOX2-OT-214ENST00000493116 KCNK17Q96T54 332 aa8.82□□□□□ -1
SOX2-OT-214ENST00000493116 BAZ1AQ9NRL2 1556 aaPredicted RBP8.82□□□□□ -1
SOX2-OT-214ENST00000493116 MMRN1Q13201 1228 aa8.81□□□□□ -1
SOX2-OT-214ENST00000493116 RGS22Q8NE09 1264 aa8.81□□□□□ -1
SOX2-OT-214ENST00000493116 KCNH8Q96L42 1107 aa8.81□□□□□ -1
SOX2-OT-214ENST00000493116 GZF1Q9H116 711 aaPredicted RBP8.81□□□□□ -1
SOX2-OT-214ENST00000493116 PCDHB15Q9Y5E8 787 aa8.81□□□□□ -1
SOX2-OT-214ENST00000493116 BICRAQ9NZM4 1560 aa8.81□□□□□ -1
SOX2-OT-214ENST00000493116 POM121CA8CG34 1229 aa8.8□□□□□ -1
SOX2-OT-214ENST00000493116 NDUFV2P19404 249 aa8.8□□□□□ -1
SOX2-OT-214ENST00000493116 PTPREP23469 700 aa8.8□□□□□ -1
SOX2-OT-214ENST00000493116 SOX11P35716 441 aa8.8□□□□□ -1
SOX2-OT-214ENST00000493116 CSPP1Q1MSJ5 1256 aa8.8□□□□□ -1
SOX2-OT-214ENST00000493116 HDGFL1Q5TGJ6 251 aa8.8□□□□□ -1
SOX2-OT-214ENST00000493116 GJD4Q96KN9 370 aaPredicted RBP8.8□□□□□ -1
SOX2-OT-214ENST00000493116 TSKSQ9UJT2 592 aa8.8□□□□□ -1
SOX2-OT-214ENST00000493116 TRIM6-TRIM34B2RNG4 842 aa8.79□□□□□ -1
SOX2-OT-214ENST00000493116 TK2O00142 265 aa8.79□□□□□ -1
SOX2-OT-214ENST00000493116 CSB-PGBD3P0DP91 1061 aa8.79□□□□□ -1
SOX2-OT-214ENST00000493116 GCGRP47871 477 aa8.79□□□□□ -1
SOX2-OT-214ENST00000493116 PNMA3Q9UL41 463 aa8.79□□□□□ -1
SOX2-OT-214ENST00000493116 COL9A1P20849 921 aa8.78□□□□□ -1
SOX2-OT-214ENST00000493116 CECR2Q9BXF3 1484 aa8.77□□□□□ -1
SOX2-OT-214ENST00000493116 FDX1P10109 184 aa8.77□□□□□ -1.01
SOX2-OT-214ENST00000493116 MFAP1P55081 439 aaKnown RBP8.77□□□□□ -1.01
SOX2-OT-214ENST00000493116 SRPK2P78362 688 aaKnown RBP8.77□□□□□ -1.01
SOX2-OT-214ENST00000493116 ADGRD1Q6QNK2 874 aa8.77□□□□□ -1.01
SOX2-OT-214ENST00000493116 RDH13Q8NBN7 331 aa8.77□□□□□ -1.01
SOX2-OT-214ENST00000493116 HOXA2O43364 376 aa8.76□□□□□ -1.01
SOX2-OT-214ENST00000493116 HELBQ8NG08 1087 aaPredicted RBP8.76□□□□□ -1.01
SOX2-OT-214ENST00000493116 SLC4A5Q9BY07 1137 aa8.76□□□□□ -1.01
SOX2-OT-214ENST00000493116 GRIPAP1Q4V328 841 aa8.75□□□□□ -1.01
SOX2-OT-214ENST00000493116 CABLES1Q8TDN4 633 aa8.75□□□□□ -1.01
SOX2-OT-214ENST00000493116 PPP1R12CQ9BZL4 782 aa8.75□□□□□ -1.01
SOX2-OT-214ENST00000493116 ALG2Q9H553 416 aa8.75□□□□□ -1.01
SOX2-OT-214ENST00000493116 MYT1LQ9UL68 1186 aa8.75□□□□□ -1.01
SOX2-OT-214ENST00000493116 HRO43593 1189 aa8.74□□□□□ -1.01
SOX2-OT-214ENST00000493116 CFAP70Q5T0N1 1121 aa8.74□□□□□ -1.01
SOX2-OT-214ENST00000493116 ZBED2Q9BTP6 218 aa8.74□□□□□ -1.01
SOX2-OT-214ENST00000493116 VPS9D1Q9Y2B5 631 aa8.74□□□□□ -1.01
SOX2-OT-214ENST00000493116 MROH2BQ7Z745 1585 aa8.73□□□□□ -1.01
SOX2-OT-214ENST00000493116 MTMR2Q13614 643 aa8.73□□□□□ -1.01
SOX2-OT-214ENST00000493116 PNMA1Q8ND90 353 aa8.73□□□□□ -1.01
SOX2-OT-214ENST00000493116 SLC4A3P48751 1232 aa8.72□□□□□ -1.01
SOX2-OT-214ENST00000493116 ADAMTS19Q8TE59 1207 aa8.72□□□□□ -1.01
SOX2-OT-214ENST00000493116 TRIM34Q9BYJ4 488 aa8.72□□□□□ -1.01
SOX2-OT-214ENST00000493116 SMARCA4P51532 1647 aa8.72□□□□□ -1.01
SOX2-OT-214ENST00000493116 CTDSPL2Q05D32 466 aa8.71□□□□□ -1.02
SOX2-OT-214ENST00000493116 MTMR7Q9Y216 660 aa8.71□□□□□ -1.02
SOX2-OT-214ENST00000493116 ATG7O95352 703 aa8.7□□□□□ -1.02
SOX2-OT-214ENST00000493116 HDGFP51858 240 aaKnown RBP8.7□□□□□ -1.02
SOX2-OT-214ENST00000493116 RNF166Q96A37 237 aaPredicted RBP8.7□□□□□ -1.02
SOX2-OT-214ENST00000493116 PCDHGC3Q9UN70 934 aa8.7□□□□□ -1.02
SOX2-OT-214ENST00000493116 PALM3A6NDB9 673 aaPredicted RBP8.69□□□□□ -1.02
SOX2-OT-214ENST00000493116 C3orf80F5H4A9 247 aa8.69□□□□□ -1.02
SOX2-OT-214ENST00000493116 AMOTL2Q9Y2J4 779 aa8.69□□□□□ -1.02
SOX2-OT-214ENST00000493116 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.68□□□□□ -1.02
SOX2-OT-214ENST00000493116 BHMG1C9JSJ3 638 aaPredicted RBP8.68□□□□□ -1.02
SOX2-OT-214ENST00000493116 GPR37L1O60883 481 aa8.68□□□□□ -1.02
SOX2-OT-214ENST00000493116 PROX2Q3B8N5 592 aa8.68□□□□□ -1.02
SOX2-OT-214ENST00000493116 RFX1P22670 979 aa8.67□□□□□ -1.02
SOX2-OT-214ENST00000493116 B4GALNT3Q6L9W6 998 aa8.67□□□□□ -1.02
SOX2-OT-214ENST00000493116 SLF2Q8IX21 1173 aa8.67□□□□□ -1.02
SOX2-OT-214ENST00000493116 VRTNQ9H8Y1 702 aa8.67□□□□□ -1.02
SOX2-OT-214ENST00000493116 HMX1Q9NP08 348 aaPredicted RBP8.67□□□□□ -1.02
SOX2-OT-214ENST00000493116 VAC14Q08AM6 782 aa8.66□□□□□ -1.02
SOX2-OT-214ENST00000493116 SEMA3FQ13275 785 aa8.66□□□□□ -1.02
SOX2-OT-214ENST00000493116 STAC3Q96MF2 364 aa8.66□□□□□ -1.02
SOX2-OT-214ENST00000493116 SLC10A3P09131 477 aa8.65□□□□□ -1.02
SOX2-OT-214ENST00000493116 LMOD1P29536 600 aaPredicted RBP8.65□□□□□ -1.02
SOX2-OT-214ENST00000493116 EIF4G2P78344 907 aaKnown RBP eCLIP8.65□□□□□ -1.02
SOX2-OT-214ENST00000493116 TFIP11Q9UBB9 837 aaKnown RBP8.65□□□□□ -1.02
SOX2-OT-214ENST00000493116 RABGEF1Q9UJ41 708 aa8.65□□□□□ -1.02
SOX2-OT-214ENST00000493116 WIZO95785 1651 aa8.65□□□□□ -1.03
SOX2-OT-214ENST00000493116 SMARCA2P51531 1590 aa8.65□□□□□ -1.03
SOX2-OT-214ENST00000493116 PEG3Q9GZU2 1588 aa8.65□□□□□ -1.03
SOX2-OT-214ENST00000493116 DESI1Q6ICB0 168 aa8.64□□□□□ -1.03
SOX2-OT-214ENST00000493116 KIAA1468Q9P260 1216 aa8.64□□□□□ -1.03
SOX2-OT-214ENST00000493116 SMAPO00193 183 aa8.63□□□□□ -1.03
SOX2-OT-214ENST00000493116 ATP6V1AP38606 617 aa8.63□□□□□ -1.03
SOX2-OT-214ENST00000493116 ELOAQ14241 798 aaKnown RBP8.63□□□□□ -1.03
SOX2-OT-214ENST00000493116 SWT1Q5T5J6 900 aaKnown RBP8.63□□□□□ -1.03
SOX2-OT-214ENST00000493116 LRRN4Q8WUT4 740 aa8.63□□□□□ -1.03
SOX2-OT-214ENST00000493116 TOP2AP11388 1531 aaKnown RBP8.63□□□□□ -1.03
SOX2-OT-214ENST00000493116 CFAP99D6REC4 459 aa8.62□□□□□ -1.03
SOX2-OT-214ENST00000493116 C6orf229H3BNL8 230 aa8.62□□□□□ -1.03
SOX2-OT-214ENST00000493116 NFATC2IPQ8NCF5 419 aa8.62□□□□□ -1.03
SOX2-OT-214ENST00000493116 NBPF3Q9H094 633 aa8.62□□□□□ -1.03
SOX2-OT-214ENST00000493116 GNEQ9Y223 722 aaKnown RBP8.62□□□□□ -1.03
SOX2-OT-214ENST00000493116 MAFBQ9Y5Q3 323 aaPredicted RBP8.62□□□□□ -1.03
SOX2-OT-214ENST00000493116 TMEM88BA6NKF7 163 aa8.61□□□□□ -1.03
SOX2-OT-214ENST00000493116 E9PSI1 815 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms