RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 ITGBL1O95965 494 aaPredicted RBP11.64□□□□□ -0.55
TPR-208ENST00000492973 TJAP1Q5JTD0 557 aa11.64□□□□□ -0.55
TPR-208ENST00000492973 MTRQ99707 1265 aa11.64□□□□□ -0.55
TPR-208ENST00000492973 ATP6V1AP38606 617 aa11.63□□□□□ -0.55
TPR-208ENST00000492973 USP46P62068 366 aa11.63□□□□□ -0.55
TPR-208ENST00000492973 FAM117AQ9C073 453 aa11.63□□□□□ -0.55
TPR-208ENST00000492973 FGD5Q6ZNL6 1462 aa11.63□□□□□ -0.55
TPR-208ENST00000492973 SYNJ1O43426 1573 aa11.62□□□□□ -0.55
TPR-208ENST00000492973 BLOC1S3Q6QNY0 202 aa11.62□□□□□ -0.55
TPR-208ENST00000492973 SPIRE2Q8WWL2 714 aa11.62□□□□□ -0.55
TPR-208ENST00000492973 IFT140Q96RY7 1462 aa11.62□□□□□ -0.55
TPR-208ENST00000492973 PUS10Q3MIT2 529 aaKnown RBP11.61□□□□□ -0.55
TPR-208ENST00000492973 MORN1Q5T089 497 aa11.61□□□□□ -0.55
TPR-208ENST00000492973 NUTM1Q86Y26 1132 aa11.61□□□□□ -0.55
TPR-208ENST00000492973 RAD54L2Q9Y4B4 1467 aa11.61□□□□□ -0.55
TPR-208ENST00000492973 SOGA1O94964 1423 aa11.6□□□□□ -0.55
TPR-208ENST00000492973 HOXA2O43364 376 aa11.6□□□□□ -0.55
TPR-208ENST00000492973 IL21Q9HBE4 155 aa11.6□□□□□ -0.55
TPR-208ENST00000492973 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
TPR-208ENST00000492973 PLEKHG3A1L390 1219 aa11.59□□□□□ -0.55
TPR-208ENST00000492973 COPS2P61201 443 aa11.59□□□□□ -0.55
TPR-208ENST00000492973 DDRGK1Q96HY6 314 aa11.59□□□□□ -0.55
TPR-208ENST00000492973 TBC1D2Q9BYX2 928 aa11.59□□□□□ -0.55
TPR-208ENST00000492973 GRIPAP1Q4V328 841 aa11.58□□□□□ -0.56
TPR-208ENST00000492973 ZNF608Q9ULD9 1512 aaPredicted RBP11.58□□□□□ -0.56
TPR-208ENST00000492973 NR1I2O75469 434 aa11.57□□□□□ -0.56
TPR-208ENST00000492973 DIXDC1Q155Q3 683 aa11.57□□□□□ -0.56
TPR-208ENST00000492973 ZNF516Q92618 1163 aa11.57□□□□□ -0.56
TPR-208ENST00000492973 HLA-CQ95604 372 aa11.57□□□□□ -0.56
TPR-208ENST00000492973 BIVM-ERCC5R4GMW8 1640 aa11.57□□□□□ -0.56
TPR-208ENST00000492973 ZPR1O75312 459 aa11.56□□□□□ -0.56
TPR-208ENST00000492973 KCNC4Q03721 635 aa11.56□□□□□ -0.56
TPR-208ENST00000492973 IFFO2Q5TF58 517 aa11.56□□□□□ -0.56
TPR-208ENST00000492973 SCUBE3Q8IX30 993 aa11.56□□□□□ -0.56
TPR-208ENST00000492973 SLC27A5Q9Y2P5 690 aa11.56□□□□□ -0.56
TPR-208ENST00000492973 TARBP1Q13395 1621 aaKnown RBP11.56□□□□□ -0.56
TPR-208ENST00000492973 MOXD2PA6NHM9 499 aa11.55□□□□□ -0.56
TPR-208ENST00000492973 PLA2G2EQ9NZK7 142 aa11.55□□□□□ -0.56
TPR-208ENST00000492973 TDRD9Q8NDG6 1382 aaKnown RBP11.54□□□□□ -0.56
TPR-208ENST00000492973 MYSM1Q5VVJ2 828 aa11.54□□□□□ -0.56
TPR-208ENST00000492973 AQRO60306 1485 aaKnown RBP eCLIP11.53□□□□□ -0.564e-15■■■■■ 48.5
TPR-208ENST00000492973 NDUFV2P19404 249 aa11.53□□□□□ -0.56
TPR-208ENST00000492973 GJA5P36382 358 aa11.53□□□□□ -0.56
TPR-208ENST00000492973 GUCA2AQ02747 115 aa11.53□□□□□ -0.56
TPR-208ENST00000492973 ABCA10Q8WWZ4 1543 aa11.53□□□□□ -0.56
TPR-208ENST00000492973 THAP11Q96EK4 314 aa11.52□□□□□ -0.57
TPR-208ENST00000492973 SALL2Q9Y467 1007 aaPredicted RBP11.52□□□□□ -0.57
TPR-208ENST00000492973 SPTLC1O15269 473 aa11.51□□□□□ -0.57
TPR-208ENST00000492973 TLL1O43897 1013 aa11.51□□□□□ -0.57
TPR-208ENST00000492973 FDX1P10109 184 aa11.51□□□□□ -0.57
TPR-208ENST00000492973 RSBN1LQ6PCB5 846 aaPredicted RBP11.51□□□□□ -0.57
TPR-208ENST00000492973 IL27Q8NEV9 243 aa11.51□□□□□ -0.57
TPR-208ENST00000492973 RSPH6AQ9H0K4 717 aa11.51□□□□□ -0.57
TPR-208ENST00000492973 PCDHGC3Q9UN70 934 aa11.51□□□□□ -0.57
TPR-208ENST00000492973 NKX2-3Q8TAU0 364 aa11.5□□□□□ -0.57
TPR-208ENST00000492973 Q3C1V9 767 aa11.49□□□□□ -0.57
TPR-208ENST00000492973 SH3D19Q5HYK7 790 aa11.49□□□□□ -0.57
TPR-208ENST00000492973 BRICD5Q6PL45 260 aa11.49□□□□□ -0.57
TPR-208ENST00000492973 RIC3Q7Z5B4 369 aa11.49□□□□□ -0.57
TPR-208ENST00000492973 RNF19BQ6ZMZ0 732 aa11.48□□□□□ -0.57
TPR-208ENST00000492973 LIMD1Q9UGP4 676 aa11.48□□□□□ -0.57
TPR-208ENST00000492973 ADH1BP00325 375 aa11.47□□□□□ -0.57
TPR-208ENST00000492973 TUSC1Q2TAM9 212 aa11.47□□□□□ -0.57
TPR-208ENST00000492973 EIF4G3O43432 1585 aaKnown RBP11.46□□□□□ -0.57
TPR-208ENST00000492973 FMNL1O95466 1100 aaPredicted RBP11.46□□□□□ -0.57
TPR-208ENST00000492973 SKIV2LQ15477 1246 aaKnown RBP11.46□□□□□ -0.57
TPR-208ENST00000492973 SPSB2Q99619 263 aa11.46□□□□□ -0.57
TPR-208ENST00000492973 GOPCQ9HD26 462 aa11.46□□□□□ -0.57
TPR-208ENST00000492973 PCDHB15Q9Y5E8 787 aa11.46□□□□□ -0.57
TPR-208ENST00000492973 WDR97A6NE52 1622 aa11.46□□□□□ -0.58
TPR-208ENST00000492973 GAPVD1Q14C86 1478 aa11.45□□□□□ -0.58
TPR-208ENST00000492973 CLK2P49760 499 aaKnown RBP11.45□□□□□ -0.58
TPR-208ENST00000492973 POLR3EQ9NVU0 708 aa11.44□□□□□ -0.58
TPR-208ENST00000492973 GRIN2BQ13224 1484 aa11.44□□□□□ -0.58
TPR-208ENST00000492973 ABCA5Q8WWZ7 1642 aa11.43□□□□□ -0.58
TPR-208ENST00000492973 FAM160A2Q8N612 972 aaPredicted RBP11.43□□□□□ -0.58
TPR-208ENST00000492973 SYMPKQ92797 1274 aaKnown RBP11.43□□□□□ -0.58
TPR-208ENST00000492973 USB1Q9BQ65 265 aaKnown RBP11.42□□□□□ -0.58
TPR-208ENST00000492973 KIF27Q86VH2 1401 aa11.42□□□□□ -0.58
TPR-208ENST00000492973 SNAPC4Q5SXM2 1469 aa11.41□□□□□ -0.58
TPR-208ENST00000492973 A0A0G2JS52 829 aa11.41□□□□□ -0.58
TPR-208ENST00000492973 MSS51Q4VC12 460 aa11.41□□□□□ -0.58
TPR-208ENST00000492973 PRPF38BQ5VTL8 546 aaKnown RBP11.41□□□□□ -0.58
TPR-208ENST00000492973 IGF1RP08069 1367 aa11.41□□□□□ -0.58
TPR-208ENST00000492973 C6orf229H3BNL8 230 aa11.4□□□□□ -0.58
TPR-208ENST00000492973 MTMR2Q13614 643 aa11.4□□□□□ -0.58
TPR-208ENST00000492973 RETREG3Q86VR2 466 aa11.4□□□□□ -0.58
TPR-208ENST00000492973 PROCA1Q8NCQ7 364 aaPredicted RBP11.4□□□□□ -0.58
TPR-208ENST00000492973 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.4□□□□□ -0.58
TPR-208ENST00000492973 RUSC2Q8N2Y8 1516 aa11.4□□□□□ -0.59
TPR-208ENST00000492973 LILRB3O75022 631 aa11.39□□□□□ -0.59
TPR-208ENST00000492973 HRCP23327 699 aa11.39□□□□□ -0.59
TPR-208ENST00000492973 QPCTQ16769 361 aa11.39□□□□□ -0.59
TPR-208ENST00000492973 SLC6A16Q9GZN6 736 aa11.39□□□□□ -0.59
TPR-208ENST00000492973 ZBTB3Q9H5J0 574 aa11.39□□□□□ -0.59
TPR-208ENST00000492973 SPDYE5A6NIY4 337 aa11.38□□□□□ -0.59
TPR-208ENST00000492973 S1PR4O95977 384 aa11.38□□□□□ -0.59
TPR-208ENST00000492973 CSPP1Q1MSJ5 1256 aa11.38□□□□□ -0.59
TPR-208ENST00000492973 PPP1R18Q6NYC8 613 aa11.38□□□□□ -0.59
TPR-208ENST00000492973 CABLES1Q8TDN4 633 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms