RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 KCNA6P17658 529 aa7.35□□□□□ -1.23
UBR4-215ENST00000492606 ABCC3O15438 1527 aa7.35□□□□□ -1.23
UBR4-215ENST00000492606 NUP153P49790 1475 aaKnown RBP7.35□□□□□ -1.23
UBR4-215ENST00000492606 NRKQ7Z2Y5 1582 aa7.34□□□□□ -1.23
UBR4-215ENST00000492606 APLP1P51693 650 aa7.34□□□□□ -1.23
UBR4-215ENST00000492606 GGT6Q6P531 493 aa7.34□□□□□ -1.23
UBR4-215ENST00000492606 KIAA1210Q9ULL0 1709 aa7.33□□□□□ -1.24
UBR4-215ENST00000492606 MYOM1P52179 1685 aa7.33□□□□□ -1.24
UBR4-215ENST00000492606 NLRP1Q9C000 1473 aa7.33□□□□□ -1.24
UBR4-215ENST00000492606 P3H3Q8IVL6 736 aa7.33□□□□□ -1.24
UBR4-215ENST00000492606 MIA2Q96PC5 1412 aa7.33□□□□□ -1.24
UBR4-215ENST00000492606 TPRNQ4KMQ1 711 aa7.32□□□□□ -1.24
UBR4-215ENST00000492606 BRINP3Q76B58 766 aa7.32□□□□□ -1.24
UBR4-215ENST00000492606 ZNF467Q7Z7K2 595 aaPredicted RBP7.32□□□□□ -1.24
UBR4-215ENST00000492606 SYT17Q9BSW7 474 aa7.32□□□□□ -1.24
UBR4-215ENST00000492606 GOLGB1Q14789 3259 aaKnown RBP7.32□□□□□ -1.24
UBR4-215ENST00000492606 NCOA2Q15596 1464 aa7.31□□□□□ -1.24
UBR4-215ENST00000492606 CADPS2Q86UW7 1296 aa7.31□□□□□ -1.24
UBR4-215ENST00000492606 SEPT12Q8IYM1 358 aa7.31□□□□□ -1.24
UBR4-215ENST00000492606 PIP4P2Q8N4L2 257 aa7.31□□□□□ -1.24
UBR4-215ENST00000492606 CAMKK2Q96RR4 588 aa7.31□□□□□ -1.24
UBR4-215ENST00000492606 MYO5CQ9NQX4 1742 aa7.31□□□□□ -1.24
UBR4-215ENST00000492606 TNRC18O15417 2968 aaPredicted RBP7.31□□□□□ -1.24
UBR4-215ENST00000492606 AATKQ6ZMQ8 1374 aa7.31□□□□□ -1.24
UBR4-215ENST00000492606 RGPD1P0DJD0 1748 aa7.3□□□□□ -1.24
UBR4-215ENST00000492606 PDAP1Q13442 181 aaKnown RBP7.3□□□□□ -1.24
UBR4-215ENST00000492606 LRRC59Q96AG4 307 aaKnown RBP7.3□□□□□ -1.24
UBR4-215ENST00000492606 KLRG1Q96E93 195 aa7.3□□□□□ -1.24
UBR4-215ENST00000492606 MFRPQ9BY79 579 aa7.3□□□□□ -1.24
UBR4-215ENST00000492606 PZPP20742 1482 aa7.3□□□□□ -1.24
UBR4-215ENST00000492606 TNS1Q9HBL0 1735 aaKnown RBP7.3□□□□□ -1.24
UBR4-215ENST00000492606 DISP2A7MBM2 1401 aa7.29□□□□□ -1.24
UBR4-215ENST00000492606 ATP10DQ9P241 1426 aa7.29□□□□□ -1.24
UBR4-215ENST00000492606 HTRA3P83110 453 aa7.29□□□□□ -1.24
UBR4-215ENST00000492606 TXNDC2Q86VQ3 553 aa7.29□□□□□ -1.24
UBR4-215ENST00000492606 IFNL1Q8IU54 200 aa7.29□□□□□ -1.24
UBR4-215ENST00000492606 ZNF579Q8NAF0 562 aaKnown RBP7.29□□□□□ -1.24
UBR4-215ENST00000492606 DDX17Q92841 729 aaKnown RBP7.29□□□□□ -1.24
UBR4-215ENST00000492606 FHDC1Q9C0D6 1143 aaPredicted RBP7.29□□□□□ -1.24
UBR4-215ENST00000492606 PDE4DIPQ5VU43 2346 aa7.29□□□□□ -1.24
UBR4-215ENST00000492606 CTTNBP2Q8WZ74 1663 aa7.28□□□□□ -1.24
UBR4-215ENST00000492606 WDR90Q96KV7 1748 aa7.28□□□□□ -1.24
UBR4-215ENST00000492606 MLLT1Q03111 559 aaPredicted RBP7.28□□□□□ -1.24
UBR4-215ENST00000492606 CHRDL2Q6WN34 429 aa7.28□□□□□ -1.24
UBR4-215ENST00000492606 KRT27Q7Z3Y8 459 aa7.28□□□□□ -1.24
UBR4-215ENST00000492606 KIF12Q96FN5 646 aa7.28□□□□□ -1.24
UBR4-215ENST00000492606 NKTRP30414 1462 aaKnown RBP7.28□□□□□ -1.24
UBR4-215ENST00000492606 PLXNC1O60486 1568 aa7.28□□□□□ -1.24
UBR4-215ENST00000492606 NUP188Q5SRE5 1749 aa7.27□□□□□ -1.25
UBR4-215ENST00000492606 MAP3K13O43283 966 aa7.27□□□□□ -1.25
UBR4-215ENST00000492606 PSEN1P49768 467 aa7.27□□□□□ -1.25
UBR4-215ENST00000492606 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.27□□□□□ -1.25
UBR4-215ENST00000492606 RREB1Q92766 1687 aa7.26□□□□□ -1.25
UBR4-215ENST00000492606 PTGER2P43116 358 aa7.26□□□□□ -1.25
UBR4-215ENST00000492606 GPBP1L1Q9HC44 474 aaPredicted RBP7.26□□□□□ -1.25
UBR4-215ENST00000492606 UBR1Q8IWV7 1749 aa7.26□□□□□ -1.25
UBR4-215ENST00000492606 ASXL1Q8IXJ9 1541 aa7.26□□□□□ -1.25
UBR4-215ENST00000492606 PTCH1Q13635 1447 aa7.26□□□□□ -1.25
UBR4-215ENST00000492606 PPP1R37O75864 691 aa7.25□□□□□ -1.25
UBR4-215ENST00000492606 FBXO22Q8NEZ5 403 aa7.25□□□□□ -1.25
UBR4-215ENST00000492606 SLC26A8Q96RN1 970 aa7.25□□□□□ -1.25
UBR4-215ENST00000492606 RYDENQ9NUL5 291 aaKnown RBP7.25□□□□□ -1.25
UBR4-215ENST00000492606 MROH1Q8NDA8 1641 aa7.25□□□□□ -1.25
UBR4-215ENST00000492606 ARHGAP5Q13017 1502 aa7.25□□□□□ -1.25
UBR4-215ENST00000492606 DLC1Q96QB1 1528 aa7.24□□□□□ -1.25
UBR4-215ENST00000492606 HSPA1AP0DMV8 641 aaKnown RBP7.24□□□□□ -1.25
UBR4-215ENST00000492606 HSPA1BP0DMV9 641 aaKnown RBP7.24□□□□□ -1.25
UBR4-215ENST00000492606 GPR162Q16538 588 aa7.24□□□□□ -1.25
UBR4-215ENST00000492606 FAM182BQ5T319 152 aa7.24□□□□□ -1.25
UBR4-215ENST00000492606 PDGFDQ9GZP0 370 aaPredicted RBP7.24□□□□□ -1.25
UBR4-215ENST00000492606 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.24□□□□□ -1.25
UBR4-215ENST00000492606 CUL9Q8IWT3 2517 aa7.24□□□□□ -1.25
UBR4-215ENST00000492606 CASZ1Q86V15 1759 aa7.23□□□□□ -1.25
UBR4-215ENST00000492606 SLIT1O75093 1534 aa7.23□□□□□ -1.25
UBR4-215ENST00000492606 MPNDQ8N594 471 aa7.23□□□□□ -1.25
UBR4-215ENST00000492606 ZNF526Q8TF50 670 aaPredicted RBP7.23□□□□□ -1.25
UBR4-215ENST00000492606 SAMD9LQ8IVG5 1584 aa7.23□□□□□ -1.25
UBR4-215ENST00000492606 ARHGAP35Q9NRY4 1499 aa7.23□□□□□ -1.25
UBR4-215ENST00000492606 TET3O43151 1660 aa7.22□□□□□ -1.25
UBR4-215ENST00000492606 SAMD9Q5K651 1589 aa7.22□□□□□ -1.25
UBR4-215ENST00000492606 KIF3CO14782 793 aa7.22□□□□□ -1.25
UBR4-215ENST00000492606 ONECUT3O60422 494 aaPredicted RBP7.22□□□□□ -1.25
UBR4-215ENST00000492606 RGS19P49795 217 aa7.22□□□□□ -1.25
UBR4-215ENST00000492606 FAM9AQ8IZU1 332 aaPredicted RBP7.22□□□□□ -1.25
UBR4-215ENST00000492606 EFCAB3Q8N7B9 438 aa7.22□□□□□ -1.25
UBR4-215ENST00000492606 NBR1Q14596 966 aa7.21□□□□□ -1.26
UBR4-215ENST00000492606 MARF1Q9Y4F3 1742 aaKnown RBP7.21□□□□□ -1.26
UBR4-215ENST00000492606 ZBTB7AO95365 584 aa7.2□□□□□ -1.26
UBR4-215ENST00000492606 ATF3P18847 181 aa7.2□□□□□ -1.26
UBR4-215ENST00000492606 HNRNPMP52272 730 aaKnown RBP eCLIP7.2□□□□□ -1.26
UBR4-215ENST00000492606 NBPF8Q3BBV2 869 aa7.2□□□□□ -1.26
UBR4-215ENST00000492606 NBPF14Q5TI25 921 aa7.2□□□□□ -1.26
UBR4-215ENST00000492606 CDC42BPBQ9Y5S2 1711 aa7.2□□□□□ -1.26
UBR4-215ENST00000492606 DLL1O00548 723 aa7.19□□□□□ -1.26
UBR4-215ENST00000492606 UNC5CLQ8IV45 518 aa7.19□□□□□ -1.26
UBR4-215ENST00000492606 PHF12Q96QT6 1004 aa7.19□□□□□ -1.26
UBR4-215ENST00000492606 PHF8Q9UPP1 1060 aa7.19□□□□□ -1.26
UBR4-215ENST00000492606 CHD2O14647 1828 aaKnown RBP7.18□□□□□ -1.26
UBR4-215ENST00000492606 GPATCH8Q9UKJ3 1502 aaKnown RBP7.18□□□□□ -1.26
UBR4-215ENST00000492606 C14orf37Q86TY3 774 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms