RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 ANKRD62A6NC57 917 aa5.05□□□□□ -1.6
ATPAF1-206ENST00000492233 SND1Q7KZF4 910 aaKnown RBP eCLIP5.05□□□□□ -1.6
ATPAF1-206ENST00000492233 PKNOX2Q96KN3 472 aa5.05□□□□□ -1.6
ATPAF1-206ENST00000492233 ZNF330Q9Y3S2 320 aaPredicted RBP5.05□□□□□ -1.6
ATPAF1-206ENST00000492233 ROCK2O75116 1388 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-206ENST00000492233 DHX29Q7Z478 1369 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-206ENST00000492233 CLASP1Q7Z460 1538 aa5.04□□□□□ -1.6
ATPAF1-206ENST00000492233 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.04□□□□□ -1.6
ATPAF1-206ENST00000492233 ERICH6BQ5W0A0 696 aa5.04□□□□□ -1.6
ATPAF1-206ENST00000492233 PLCH2O75038 1416 aa5.04□□□□□ -1.6
ATPAF1-206ENST00000492233 PLXNC1O60486 1568 aa5.04□□□□□ -1.6
ATPAF1-206ENST00000492233 KDM5CP41229 1560 aa5.04□□□□□ -1.6
ATPAF1-206ENST00000492233 FAM135AQ9P2D6 1515 aa5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 ATP10AO60312 1499 aa5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 MAGI2Q86UL8 1455 aa5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 RBM47A0AV96 593 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 HNRNPUQ00839 825 aaKnown RBP eCLIP5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 TSR1Q2NL82 804 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 CCDC184Q52MB2 194 aa5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 MRRFQ96E11 262 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 CCDC136Q96JN2 1154 aa5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 PPP1R1BQ9UD71 204 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 ERBINQ96RT1 1412 aa5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 UNC13BO14795 1591 aa5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 CHD1O14646 1710 aa5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 CDC42BPBQ9Y5S2 1711 aa5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 GPRASP1Q5JY77 1395 aa5.03□□□□□ -1.6
ATPAF1-206ENST00000492233 ARHGAP5Q13017 1502 aa5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 SYCP2Q9BX26 1530 aa5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 ZBED9Q6R2W3 1325 aa5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 PLA2R1Q13018 1463 aa5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 LOC102724159A0A0B4J2E5 919 aa5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 MARCH6O60337 910 aa5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 PWP2Q15269 919 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 SREK1Q8WXA9 508 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 AKT1S1Q96B36 256 aa5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 CARD11Q9BXL7 1154 aa5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 MRS2Q9HD23 443 aa5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 PRAG1Q86YV5 1406 aa5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 ERCC6L2Q5T890 1561 aa5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 TTC37Q6PGP7 1564 aa5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 POLR1AO95602 1720 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 ARAP3Q8WWN8 1544 aa5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 DUOX2Q9NRD8 1548 aa5.02□□□□□ -1.61
ATPAF1-206ENST00000492233 BCORL1Q5H9F3 1711 aa5.01□□□□□ -1.61
ATPAF1-206ENST00000492233 CCDC144AA2RUR9 1427 aa5.01□□□□□ -1.61
ATPAF1-206ENST00000492233 CSB-PGBD3P0DP91 1061 aa5.01□□□□□ -1.61
ATPAF1-206ENST00000492233 FGD1P98174 961 aa5.01□□□□□ -1.61
ATPAF1-206ENST00000492233 EFCAB2Q5VUJ9 269 aa5.01□□□□□ -1.61
ATPAF1-206ENST00000492233 TEX2Q8IWB9 1127 aa5.01□□□□□ -1.61
ATPAF1-206ENST00000492233 KTN1Q86UP2 1357 aaKnown RBP5.01□□□□□ -1.61
ATPAF1-206ENST00000492233 RTEL1-TNFRSF6BF6WH68 1400 aa5□□□□□ -1.61
ATPAF1-206ENST00000492233 MLLT3P42568 568 aaPredicted RBP5□□□□□ -1.61
ATPAF1-206ENST00000492233 PARP9Q8IXQ6 854 aa5□□□□□ -1.61
ATPAF1-206ENST00000492233 REM2Q8IYK8 340 aaPredicted RBP5□□□□□ -1.61
ATPAF1-206ENST00000492233 CALR3Q96L12 384 aaKnown RBP5□□□□□ -1.61
ATPAF1-206ENST00000492233 KIAA1522Q9P206 1035 aaPredicted RBP5□□□□□ -1.61
ATPAF1-206ENST00000492233 USTQ9Y2C2 406 aa5□□□□□ -1.61
ATPAF1-206ENST00000492233 COG6Q9Y2V7 657 aa5□□□□□ -1.61
ATPAF1-206ENST00000492233 RIPOR2Q9Y4F9 1068 aa5□□□□□ -1.61
ATPAF1-206ENST00000492233 ABCC1P33527 1531 aa5□□□□□ -1.61
ATPAF1-206ENST00000492233 IQGAP3Q86VI3 1631 aa5□□□□□ -1.61
ATPAF1-206ENST00000492233 A2MP01023 1474 aa5□□□□□ -1.61
ATPAF1-206ENST00000492233 LAMC1P11047 1609 aa4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 ST20-MTHFSA0A0A6YYL1 179 aa4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 SPDYE2BA6NHP3 402 aa4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 SPDYE6P0CI01 402 aa4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 NUBP1P53384 320 aa4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 SETQ01105 290 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 SPDYE2Q495Y8 402 aa4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 CHRDL2Q6WN34 429 aa4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 EXOC8Q8IYI6 725 aa4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 FAM9BQ8IZU0 186 aa4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 DCAF11Q8TEB1 546 aa4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 STAC3Q96MF2 364 aa4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 MYH16Q9H6N6 1097 aa4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 MYO5CQ9NQX4 1742 aa4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 BRD4O60885 1362 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-206ENST00000492233 ZC3H4Q9UPT8 1303 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-206ENST00000492233 SMG6Q86US8 1419 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-206ENST00000492233 TRAPPC8Q9Y2L5 1435 aa4.98□□□□□ -1.61
ATPAF1-206ENST00000492233 ZCCHC11Q5TAX3 1644 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-206ENST00000492233 CARNS1A5YM72 827 aa4.98□□□□□ -1.61
ATPAF1-206ENST00000492233 RALBP1Q15311 655 aa4.98□□□□□ -1.61
ATPAF1-206ENST00000492233 PNISRQ8TF01 805 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-206ENST00000492233 NAP1L5Q96NT1 182 aaPredicted RBP4.98□□□□□ -1.61
ATPAF1-206ENST00000492233 PLCD4Q9BRC7 762 aa4.98□□□□□ -1.61
ATPAF1-206ENST00000492233 LRPPRCP42704 1394 aaKnown RBP4.98□□□□□ -1.61
ATPAF1-206ENST00000492233 SPAG9O60271 1321 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-206ENST00000492233 RNF123Q5XPI4 1314 aa4.97□□□□□ -1.61
ATPAF1-206ENST00000492233 MINK1Q8N4C8 1332 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-206ENST00000492233 MYBBP1AQ9BQG0 1328 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-206ENST00000492233 WASHC2CQ9Y4E1 1318 aa4.97□□□□□ -1.61
ATPAF1-206ENST00000492233 PTPRTO14522 1441 aa4.97□□□□□ -1.61
ATPAF1-206ENST00000492233 TRPM1Q7Z4N2 1603 aa4.97□□□□□ -1.61
ATPAF1-206ENST00000492233 COL17A1Q9UMD9 1497 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-206ENST00000492233 WDR7Q9Y4E6 1490 aa4.97□□□□□ -1.61
ATPAF1-206ENST00000492233 INSRP06213 1382 aa4.97□□□□□ -1.61
ATPAF1-206ENST00000492233 TCF3P15923 654 aa4.97□□□□□ -1.61
ATPAF1-206ENST00000492233 RFX1P22670 979 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms