RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 NEFLP07196 543 aa14.62□□□□□ -0.07
ITSN1-231ENST00000489261 ALKQ9UM73 1620 aa14.62□□□□□ -0.07
ITSN1-231ENST00000489261 LRPPRCP42704 1394 aaKnown RBP14.61□□□□□ -0.07
ITSN1-231ENST00000489261 NWD1Q149M9 1564 aa14.61□□□□□ -0.07
ITSN1-231ENST00000489261 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.61□□□□□ -0.07
ITSN1-231ENST00000489261 CHD2O14647 1828 aaKnown RBP14.61□□□□□ -0.07
ITSN1-231ENST00000489261 RIMS2Q9UQ26 1411 aa14.6□□□□□ -0.07
ITSN1-231ENST00000489261 TRAK1Q9UPV9 953 aa14.6□□□□□ -0.07
ITSN1-231ENST00000489261 EVC2Q86UK5 1308 aa14.59□□□□□ -0.07
ITSN1-231ENST00000489261 PLEKHG1Q9ULL1 1385 aa14.59□□□□□ -0.07
ITSN1-231ENST00000489261 AMER1Q5JTC6 1135 aaPredicted RBP14.58□□□□□ -0.08
ITSN1-231ENST00000489261 SUPT16HQ9Y5B9 1047 aaKnown RBP14.58□□□□□ -0.08
ITSN1-231ENST00000489261 DIP2AQ14689 1571 aa14.58□□□□□ -0.08
ITSN1-231ENST00000489261 ASXL1Q8IXJ9 1541 aa14.57□□□□□ -0.08
ITSN1-231ENST00000489261 CC2D1BQ5T0F9 858 aaKnown RBP14.57□□□□□ -0.08
ITSN1-231ENST00000489261 ERICH6BQ5W0A0 696 aa14.57□□□□□ -0.08
ITSN1-231ENST00000489261 TMEM132EQ6IEE7 984 aa14.57□□□□□ -0.08
ITSN1-231ENST00000489261 PELP1Q8IZL8 1130 aaKnown RBP14.57□□□□□ -0.08
ITSN1-231ENST00000489261 CNGB1Q14028 1251 aaPredicted RBP14.56□□□□□ -0.08
ITSN1-231ENST00000489261 NRXN3Q9Y4C0 1643 aa14.55□□□□□ -0.08
ITSN1-231ENST00000489261 UBAP1LF5GYI3 381 aa14.55□□□□□ -0.08
ITSN1-231ENST00000489261 NKTRP30414 1462 aaKnown RBP14.55□□□□□ -0.08
ITSN1-231ENST00000489261 NINLQ9Y2I6 1382 aa14.54□□□□□ -0.08
ITSN1-231ENST00000489261 ADAMTS13Q76LX8 1427 aa14.53□□□□□ -0.08
ITSN1-231ENST00000489261 PDE3BQ13370 1112 aa14.53□□□□□ -0.08
ITSN1-231ENST00000489261 KCNA6P17658 529 aa14.52□□□□□ -0.09
ITSN1-231ENST00000489261 PPP2R1AP30153 589 aa14.52□□□□□ -0.09
ITSN1-231ENST00000489261 NUTM2DQ5VT03 806 aaPredicted RBP14.52□□□□□ -0.09
ITSN1-231ENST00000489261 SIRT1Q96EB6 747 aa14.52□□□□□ -0.09
ITSN1-231ENST00000489261 SLC26A8Q96RN1 970 aa14.52□□□□□ -0.09
ITSN1-231ENST00000489261 QRICH2Q9H0J4 1663 aa14.52□□□□□ -0.09
ITSN1-231ENST00000489261 SMG6Q86US8 1419 aaKnown RBP14.51□□□□□ -0.09
ITSN1-231ENST00000489261 YTHDC2Q9H6S0 1430 aaKnown RBP14.51□□□□□ -0.09
ITSN1-231ENST00000489261 TOM1O60784 492 aa14.51□□□□□ -0.09
ITSN1-231ENST00000489261 MYOM1P52179 1685 aa14.51□□□□□ -0.09
ITSN1-231ENST00000489261 FKBP8Q14318 412 aa14.5□□□□□ -0.09
ITSN1-231ENST00000489261 POGKQ9P215 609 aa14.5□□□□□ -0.09
ITSN1-231ENST00000489261 CARD14Q9BXL6 1004 aa14.49□□□□□ -0.09
ITSN1-231ENST00000489261 TBX22Q9Y458 520 aa14.49□□□□□ -0.09
ITSN1-231ENST00000489261 DLC1Q96QB1 1528 aa14.49□□□□□ -0.09
ITSN1-231ENST00000489261 SETD1AO15047 1707 aaKnown RBP14.49□□□□□ -0.09
ITSN1-231ENST00000489261 ARHGEF28Q8N1W1 1705 aaKnown RBP14.49□□□□□ -0.09
ITSN1-231ENST00000489261 ATAD2Q6PL18 1390 aa14.48□□□□□ -0.09
ITSN1-231ENST00000489261 ABCC11Q96J66 1382 aa14.48□□□□□ -0.09
ITSN1-231ENST00000489261 PIK3R4Q99570 1358 aa14.48□□□□□ -0.09
ITSN1-231ENST00000489261 NUDCQ9Y266 331 aa14.48□□□□□ -0.09
ITSN1-231ENST00000489261 XRN1Q8IZH2 1706 aaKnown RBP14.48□□□□□ -0.09
ITSN1-231ENST00000489261 NSD2O96028 1365 aa14.47□□□□□ -0.09
ITSN1-231ENST00000489261 TMEM94Q12767 1356 aa14.47□□□□□ -0.09
ITSN1-231ENST00000489261 ANKRD36BQ8N2N9 1353 aa14.47□□□□□ -0.09
ITSN1-231ENST00000489261 CGNL1Q0VF96 1302 aa14.46□□□□□ -0.09
ITSN1-231ENST00000489261 NGEFQ8N5V2 710 aa14.46□□□□□ -0.09
ITSN1-231ENST00000489261 BCANQ96GW7 911 aa14.46□□□□□ -0.09
ITSN1-231ENST00000489261 SLC12A5Q9H2X9 1139 aa14.46□□□□□ -0.09
ITSN1-231ENST00000489261 STK26Q9P289 416 aa14.46□□□□□ -0.09
ITSN1-231ENST00000489261 BLMP54132 1417 aaPredicted RBP14.45□□□□□ -0.1
ITSN1-231ENST00000489261 WDR43Q15061 677 aaKnown RBP eCLIP14.45□□□□□ -0.1
ITSN1-231ENST00000489261 PRAM1Q96QH2 718 aa14.45□□□□□ -0.1
ITSN1-231ENST00000489261 PTPRUQ92729 1446 aa14.44□□□□□ -0.1
ITSN1-231ENST00000489261 NCOA3Q9Y6Q9 1424 aa14.44□□□□□ -0.1
ITSN1-231ENST00000489261 PIP4K2BP78356 416 aa14.44□□□□□ -0.1
ITSN1-231ENST00000489261 TERF2IPQ9NYB0 399 aa14.44□□□□□ -0.1
ITSN1-231ENST00000489261 TULP4Q9NRJ4 1543 aa14.43□□□□□ -0.1
ITSN1-231ENST00000489261 MORC1Q86VD1 984 aa14.43□□□□□ -0.1
ITSN1-231ENST00000489261 SENP3Q9H4L4 574 aaPredicted RBP14.43□□□□□ -0.1
ITSN1-231ENST00000489261 USP32Q8NFA0 1604 aa14.43□□□□□ -0.1
ITSN1-231ENST00000489261 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.43□□□□□ -0.1
ITSN1-231ENST00000489261 ROBO1Q9Y6N7 1651 aa14.42□□□□□ -0.1
ITSN1-231ENST00000489261 NSD3Q9BZ95 1437 aa14.42□□□□□ -0.1
ITSN1-231ENST00000489261 SRPK2P78362 688 aaKnown RBP14.42□□□□□ -0.1
ITSN1-231ENST00000489261 PROSER2Q86WR7 435 aaPredicted RBP14.42□□□□□ -0.1
ITSN1-231ENST00000489261 POLR3AO14802 1390 aaPredicted RBP14.42□□□□□ -0.1
ITSN1-231ENST00000489261 HSPA1LP34931 641 aa14.41□□□□□ -0.1
ITSN1-231ENST00000489261 CABP2Q9NPB3 220 aa14.41□□□□□ -0.1
ITSN1-231ENST00000489261 FAM135BQ49AJ0 1406 aa14.41□□□□□ -0.1
ITSN1-231ENST00000489261 HDGFL2Q7Z4V5 671 aaPredicted RBP14.4□□□□□ -0.1
ITSN1-231ENST00000489261 CDK19Q9BWU1 502 aa14.4□□□□□ -0.1
ITSN1-231ENST00000489261 ADAMTS8Q9UP79 889 aa14.4□□□□□ -0.1
ITSN1-231ENST00000489261 RNF123Q5XPI4 1314 aa14.4□□□□□ -0.1
ITSN1-231ENST00000489261 MSH6P52701 1360 aa14.39□□□□□ -0.11
ITSN1-231ENST00000489261 RBM33Q96EV2 1170 aaKnown RBP14.39□□□□□ -0.11
ITSN1-231ENST00000489261 TECPR2O15040 1411 aa14.39□□□□□ -0.11
ITSN1-231ENST00000489261 MINK1Q8N4C8 1332 aaPredicted RBP14.39□□□□□ -0.11
ITSN1-231ENST00000489261 METP08581 1390 aa14.38□□□□□ -0.11
ITSN1-231ENST00000489261 CFAP53Q96M91 514 aa14.38□□□□□ -0.11
ITSN1-231ENST00000489261 SAFB2Q14151 953 aaKnown RBP eCLIP14.37□□□□□ -0.11
ITSN1-231ENST00000489261 AMOTL2Q9Y2J4 779 aa14.37□□□□□ -0.11
ITSN1-231ENST00000489261 MED1Q15648 1581 aaPredicted RBP14.37□□□□□ -0.11
ITSN1-231ENST00000489261 NALCNQ8IZF0 1738 aa14.37□□□□□ -0.11
ITSN1-231ENST00000489261 NCBP3Q53F19 620 aaKnown RBP14.36□□□□□ -0.11
ITSN1-231ENST00000489261 PPP4R2Q9NY27 417 aa14.35□□□□□ -0.11
ITSN1-231ENST00000489261 DCCP43146 1447 aa14.34□□□□□ -0.11
ITSN1-231ENST00000489261 WASLO00401 505 aaPredicted RBP14.34□□□□□ -0.11
ITSN1-231ENST00000489261 PHLPP1O60346 1717 aa14.34□□□□□ -0.11
ITSN1-231ENST00000489261 KNDC1Q76NI1 1749 aa14.34□□□□□ -0.11
ITSN1-231ENST00000489261 PTCH1Q13635 1447 aa14.33□□□□□ -0.11
ITSN1-231ENST00000489261 WAPLQ7Z5K2 1190 aa14.33□□□□□ -0.12
ITSN1-231ENST00000489261 A0A1W2PP64 1363 aa14.33□□□□□ -0.12
ITSN1-231ENST00000489261 ATP7BP35670 1465 aa14.32□□□□□ -0.12
ITSN1-231ENST00000489261 ZNF692Q9BU19 519 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms