RNA–Protein interactions for RNA: ENST00000488193.5

TFAP2A-215, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-215ENST00000488193 MINK1Q8N4C8 1332 aaPredicted RBP19.7■□□□□ 0.74
TFAP2A-215ENST00000488193 CABP2Q9NPB3 220 aa19.69■□□□□ 0.74
TFAP2A-215ENST00000488193 POGKQ9P215 609 aa19.69■□□□□ 0.74
TFAP2A-215ENST00000488193 KNSTRNQ9Y448 316 aa19.69■□□□□ 0.74
TFAP2A-215ENST00000488193 ZNF142P52746 1687 aaPredicted RBP19.68■□□□□ 0.74
TFAP2A-215ENST00000488193 NPC1L1Q9UHC9 1359 aa19.68■□□□□ 0.74
TFAP2A-215ENST00000488193 SETD1BQ9UPS6 1966 aaKnown RBP19.68■□□□□ 0.74
TFAP2A-215ENST00000488193 BRD4O60885 1362 aaPredicted RBP19.67■□□□□ 0.74
TFAP2A-215ENST00000488193 EID1Q9Y6B2 187 aa19.67■□□□□ 0.74
TFAP2A-215ENST00000488193 CPS1P31327 1500 aa19.67■□□□□ 0.74
TFAP2A-215ENST00000488193 PNISRQ8TF01 805 aaKnown RBP19.66■□□□□ 0.74
TFAP2A-215ENST00000488193 SIRT1Q96EB6 747 aa19.66■□□□□ 0.74
TFAP2A-215ENST00000488193 FAM135BQ49AJ0 1406 aa19.65■□□□□ 0.74
TFAP2A-215ENST00000488193 FAM9BQ8IZU0 186 aa19.65■□□□□ 0.74
TFAP2A-215ENST00000488193 PTPRUQ92729 1446 aa19.65■□□□□ 0.74
TFAP2A-215ENST00000488193 BCANQ96GW7 911 aa19.65■□□□□ 0.74
TFAP2A-215ENST00000488193 TMC1Q8TDI8 760 aa19.64■□□□□ 0.73
TFAP2A-215ENST00000488193 SLC26A8Q96RN1 970 aa19.64■□□□□ 0.73
TFAP2A-215ENST00000488193 NLRP13Q86W25 1043 aa19.63■□□□□ 0.73
TFAP2A-215ENST00000488193 ROBO2Q9HCK4 1378 aa19.63■□□□□ 0.73
TFAP2A-215ENST00000488193 CDK19Q9BWU1 502 aa19.62■□□□□ 0.73
TFAP2A-215ENST00000488193 TBX22Q9Y458 520 aa19.62■□□□□ 0.73
TFAP2A-215ENST00000488193 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
TFAP2A-215ENST00000488193 SRPK2P78362 688 aaKnown RBP19.6■□□□□ 0.73
TFAP2A-215ENST00000488193 NSD3Q9BZ95 1437 aa19.6■□□□□ 0.73
TFAP2A-215ENST00000488193 HNRNPUQ00839 825 aaKnown RBP eCLIP19.6■□□□□ 0.73
TFAP2A-215ENST00000488193 ANKRD36BQ8N2N9 1353 aa19.6■□□□□ 0.73
TFAP2A-215ENST00000488193 CD163L1Q9NR16 1453 aa19.6■□□□□ 0.73
TFAP2A-215ENST00000488193 USP32Q8NFA0 1604 aa19.59■□□□□ 0.73
TFAP2A-215ENST00000488193 DIP2AQ14689 1571 aa19.59■□□□□ 0.73
TFAP2A-215ENST00000488193 ATAD2Q6PL18 1390 aa19.58■□□□□ 0.73
TFAP2A-215ENST00000488193 PPP2R1AP30153 589 aa19.58■□□□□ 0.73
TFAP2A-215ENST00000488193 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.58■□□□□ 0.73
TFAP2A-215ENST00000488193 NINLQ9Y2I6 1382 aa19.58■□□□□ 0.72
TFAP2A-215ENST00000488193 A0A1W2PP64 1363 aa19.56■□□□□ 0.72
TFAP2A-215ENST00000488193 WASLO00401 505 aaPredicted RBP19.56■□□□□ 0.72
TFAP2A-215ENST00000488193 XRN1Q8IZH2 1706 aaKnown RBP19.55■□□□□ 0.72
TFAP2A-215ENST00000488193 AMOTL2Q9Y2J4 779 aa19.54■□□□□ 0.72
TFAP2A-215ENST00000488193 ADGRB2O60241 1585 aa19.53■□□□□ 0.72
TFAP2A-215ENST00000488193 ANKLE2Q86XL3 938 aa19.52■□□□□ 0.72
TFAP2A-215ENST00000488193 CABP1Q9NZU7 370 aa19.52■□□□□ 0.71
TFAP2A-215ENST00000488193 GTF3C3Q9Y5Q9 886 aa19.52■□□□□ 0.71
TFAP2A-215ENST00000488193 PTCH1Q13635 1447 aa19.51■□□□□ 0.71
TFAP2A-215ENST00000488193 PIK3R4Q99570 1358 aa19.49■□□□□ 0.71
TFAP2A-215ENST00000488193 CGNL1Q0VF96 1302 aa19.49■□□□□ 0.71
TFAP2A-215ENST00000488193 PRR36Q9H6K5 1346 aa19.49■□□□□ 0.71
TFAP2A-215ENST00000488193 ZBED9Q6R2W3 1325 aa19.48■□□□□ 0.71
TFAP2A-215ENST00000488193 ATP7BP35670 1465 aa19.48■□□□□ 0.71
TFAP2A-215ENST00000488193 CHD2O14647 1828 aaKnown RBP19.48■□□□□ 0.71
TFAP2A-215ENST00000488193 TERF2IPQ9NYB0 399 aa19.48■□□□□ 0.71
TFAP2A-215ENST00000488193 NCKAP5LQ9HCH0 1330 aa19.47■□□□□ 0.71
TFAP2A-215ENST00000488193 NUDT16Q96DE0 195 aaKnown RBP19.47■□□□□ 0.71
TFAP2A-215ENST00000488193 CPSF1Q10570 1443 aaKnown RBP19.46■□□□□ 0.71
TFAP2A-215ENST00000488193 KCNA6P17658 529 aa19.45■□□□□ 0.7
TFAP2A-215ENST00000488193 NSD2O96028 1365 aa19.45■□□□□ 0.7
TFAP2A-215ENST00000488193 PPIP5K1Q6PFW1 1433 aa19.45■□□□□ 0.7
TFAP2A-215ENST00000488193 MORC1Q86VD1 984 aa19.45■□□□□ 0.7
TFAP2A-215ENST00000488193 INSRP06213 1382 aa19.44■□□□□ 0.7
TFAP2A-215ENST00000488193 TOPAZ1Q8N9V7 1692 aa19.44■□□□□ 0.7
TFAP2A-215ENST00000488193 CCDC61Q9Y6R9 512 aa19.43■□□□□ 0.7
TFAP2A-215ENST00000488193 NPHP4O75161 1426 aaPredicted RBP19.43■□□□□ 0.7
TFAP2A-215ENST00000488193 FYB1O15117 783 aa19.43■□□□□ 0.7
TFAP2A-215ENST00000488193 HDGFL2Q7Z4V5 671 aaPredicted RBP19.43■□□□□ 0.7
TFAP2A-215ENST00000488193 CDC42BPGQ6DT37 1551 aa19.43■□□□□ 0.7
TFAP2A-215ENST00000488193 ANKRD26Q9UPS8 1709 aa19.43■□□□□ 0.7
TFAP2A-215ENST00000488193 BLMP54132 1417 aaPredicted RBP19.42■□□□□ 0.7
TFAP2A-215ENST00000488193 SENP3-EIF4A1A0A087X0R7 540 aa19.41■□□□□ 0.7
TFAP2A-215ENST00000488193 KDM4FA0A1W2PPD8 638 aa19.41■□□□□ 0.7
TFAP2A-215ENST00000488193 AKAP12Q02952 1782 aa19.41■□□□□ 0.7
TFAP2A-215ENST00000488193 KIF20BQ96Q89 1820 aa19.4■□□□□ 0.7
TFAP2A-215ENST00000488193 MON2Q7Z3U7 1717 aa19.4■□□□□ 0.7
TFAP2A-215ENST00000488193 ADAMTS8Q9UP79 889 aa19.4■□□□□ 0.7
TFAP2A-215ENST00000488193 POLR3AO14802 1390 aaPredicted RBP19.4■□□□□ 0.7
TFAP2A-215ENST00000488193 TNNT2P45379 298 aaPredicted RBP19.39■□□□□ 0.7
TFAP2A-215ENST00000488193 GGNBP2Q9H3C7 697 aa19.39■□□□□ 0.7
TFAP2A-215ENST00000488193 NKTRP30414 1462 aaKnown RBP19.37■□□□□ 0.69
TFAP2A-215ENST00000488193 SHPRHQ149N8 1683 aa19.36■□□□□ 0.69
TFAP2A-215ENST00000488193 RGPD8O14715 1765 aaPredicted RBP19.36■□□□□ 0.69
TFAP2A-215ENST00000488193 ITSN1Q15811 1721 aa19.36■□□□□ 0.69
TFAP2A-215ENST00000488193 EDC4Q6P2E9 1401 aaKnown RBP19.36■□□□□ 0.69
TFAP2A-215ENST00000488193 PLEKHG3A1L390 1219 aa19.36■□□□□ 0.69
TFAP2A-215ENST00000488193 NUTM2FA1L443 756 aa19.35■□□□□ 0.69
TFAP2A-215ENST00000488193 MTHFSP49914 203 aa19.35■□□□□ 0.69
TFAP2A-215ENST00000488193 NALCNQ8IZF0 1738 aa19.35■□□□□ 0.69
TFAP2A-215ENST00000488193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.34■□□□□ 0.69
TFAP2A-215ENST00000488193 FMN2Q9NZ56 1722 aa19.33■□□□□ 0.69
TFAP2A-215ENST00000488193 NWD1Q149M9 1564 aa19.33■□□□□ 0.68
TFAP2A-215ENST00000488193 NRKQ7Z2Y5 1582 aa19.33■□□□□ 0.68
TFAP2A-215ENST00000488193 WDR43Q15061 677 aaKnown RBP eCLIP19.32■□□□□ 0.68
TFAP2A-215ENST00000488193 ACEP12821 1306 aa19.31■□□□□ 0.68
TFAP2A-215ENST00000488193 NME9Q86XW9 330 aa19.31■□□□□ 0.68
TFAP2A-215ENST00000488193 RBM33Q96EV2 1170 aaKnown RBP19.31■□□□□ 0.68
TFAP2A-215ENST00000488193 ZNF692Q9BU19 519 aaPredicted RBP19.31■□□□□ 0.68
TFAP2A-215ENST00000488193 ZRANB1Q9UGI0 708 aa19.31■□□□□ 0.68
TFAP2A-215ENST00000488193 SSH2Q76I76 1423 aa19.3■□□□□ 0.68
TFAP2A-215ENST00000488193 ANKARQ7Z5J8 1434 aa19.29■□□□□ 0.68
TFAP2A-215ENST00000488193 COL3A1P02461 1466 aaPredicted RBP19.29■□□□□ 0.68
TFAP2A-215ENST00000488193 USP6P35125 1406 aa19.28■□□□□ 0.68
TFAP2A-215ENST00000488193 SMG6Q86US8 1419 aaKnown RBP19.28■□□□□ 0.68
TFAP2A-215ENST00000488193 HSPA2P54652 639 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms