RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 NKTRP30414 1462 aaKnown RBP10.62□□□□□ -0.71
UBE4B-209ENST00000487244 XRN1Q8IZH2 1706 aaKnown RBP10.62□□□□□ -0.71
UBE4B-209ENST00000487244 KCNA6P17658 529 aa10.62□□□□□ -0.71
UBE4B-209ENST00000487244 HDGFP51858 240 aaKnown RBP10.62□□□□□ -0.71
UBE4B-209ENST00000487244 PTPRUQ92729 1446 aa10.61□□□□□ -0.71
UBE4B-209ENST00000487244 TMEM94Q12767 1356 aa10.61□□□□□ -0.71
UBE4B-209ENST00000487244 SP7Q8TDD2 431 aaPredicted RBP10.6□□□□□ -0.71
UBE4B-209ENST00000487244 TBX22Q9Y458 520 aa10.6□□□□□ -0.71
UBE4B-209ENST00000487244 METP08581 1390 aa10.6□□□□□ -0.71
UBE4B-209ENST00000487244 ZRANB1Q9UGI0 708 aa10.59□□□□□ -0.71
UBE4B-209ENST00000487244 ANKRD30BQ9BXX2 1392 aa10.58□□□□□ -0.72
UBE4B-209ENST00000487244 PIP4K2BP78356 416 aa10.58□□□□□ -0.72
UBE4B-209ENST00000487244 RGL3Q3MIN7 710 aa10.58□□□□□ -0.72
UBE4B-209ENST00000487244 PROSER2Q86WR7 435 aaPredicted RBP10.58□□□□□ -0.72
UBE4B-209ENST00000487244 ACIN1Q9UKV3 1341 aaKnown RBP10.58□□□□□ -0.72
UBE4B-209ENST00000487244 PIK3R4Q99570 1358 aa10.57□□□□□ -0.72
UBE4B-209ENST00000487244 HRCP23327 699 aa10.57□□□□□ -0.72
UBE4B-209ENST00000487244 RPGRIP1LQ68CZ1 1315 aa10.57□□□□□ -0.72
UBE4B-209ENST00000487244 ADGRF5Q8IZF2 1346 aa10.57□□□□□ -0.72
UBE4B-209ENST00000487244 TOM1O60784 492 aa10.56□□□□□ -0.72
UBE4B-209ENST00000487244 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-209ENST00000487244 ASXL1Q8IXJ9 1541 aa10.55□□□□□ -0.72
UBE4B-209ENST00000487244 VGFO15240 615 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-209ENST00000487244 TSPYL2Q9H2G4 693 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-209ENST00000487244 AMOTL2Q9Y2J4 779 aa10.55□□□□□ -0.72
UBE4B-209ENST00000487244 NALCNQ8IZF0 1738 aa10.55□□□□□ -0.72
UBE4B-209ENST00000487244 ROBO1Q9Y6N7 1651 aa10.54□□□□□ -0.72
UBE4B-209ENST00000487244 PIK3C2GO75747 1445 aa10.54□□□□□ -0.72
UBE4B-209ENST00000487244 IFNLR1Q8IU57 520 aaPredicted RBP10.54□□□□□ -0.72
UBE4B-209ENST00000487244 HSPA1LP34931 641 aa10.53□□□□□ -0.72
UBE4B-209ENST00000487244 MYOM2P54296 1465 aa10.53□□□□□ -0.72
UBE4B-209ENST00000487244 NRXN1Q9ULB1 1477 aa10.53□□□□□ -0.72
UBE4B-209ENST00000487244 MSH6P52701 1360 aa10.52□□□□□ -0.72
UBE4B-209ENST00000487244 RASEFQ8IZ41 740 aa10.52□□□□□ -0.73
UBE4B-209ENST00000487244 NUBP1P53384 320 aa10.51□□□□□ -0.73
UBE4B-209ENST00000487244 LAMC1P11047 1609 aa10.51□□□□□ -0.73
UBE4B-209ENST00000487244 ROBO2Q9HCK4 1378 aa10.51□□□□□ -0.73
UBE4B-209ENST00000487244 PTCH1Q13635 1447 aa10.5□□□□□ -0.73
UBE4B-209ENST00000487244 NCOA3Q9Y6Q9 1424 aa10.5□□□□□ -0.73
UBE4B-209ENST00000487244 KNDC1Q76NI1 1749 aa10.5□□□□□ -0.73
UBE4B-209ENST00000487244 C14orf37Q86TY3 774 aa10.5□□□□□ -0.73
UBE4B-209ENST00000487244 ZNF579Q8NAF0 562 aaKnown RBP10.5□□□□□ -0.73
UBE4B-209ENST00000487244 PRAG1Q86YV5 1406 aa10.5□□□□□ -0.73
UBE4B-209ENST00000487244 FAM212AQ96EL1 285 aa10.49□□□□□ -0.73
UBE4B-209ENST00000487244 DHX57Q6P158 1386 aaKnown RBP10.49□□□□□ -0.73
UBE4B-209ENST00000487244 ADGRL3Q9HAR2 1447 aa10.49□□□□□ -0.73
UBE4B-209ENST00000487244 TRIM26Q12899 539 aaPredicted RBP10.48□□□□□ -0.73
UBE4B-209ENST00000487244 TMEM132EQ6IEE7 984 aa10.48□□□□□ -0.73
UBE4B-209ENST00000487244 SPOCK2Q92563 424 aa10.48□□□□□ -0.73
UBE4B-209ENST00000487244 FAM135BQ49AJ0 1406 aa10.48□□□□□ -0.73
UBE4B-209ENST00000487244 PHLPP1O60346 1717 aa10.47□□□□□ -0.73
UBE4B-209ENST00000487244 CLCN6P51797 869 aa10.47□□□□□ -0.73
UBE4B-209ENST00000487244 CFAP70Q5T0N1 1121 aa10.47□□□□□ -0.73
UBE4B-209ENST00000487244 C19orf44Q9H6X5 657 aa10.47□□□□□ -0.73
UBE4B-209ENST00000487244 SLAIN2Q9P270 581 aa10.47□□□□□ -0.73
UBE4B-209ENST00000487244 STK26Q9P289 416 aa10.47□□□□□ -0.73
UBE4B-209ENST00000487244 DCCP43146 1447 aa10.47□□□□□ -0.73
UBE4B-209ENST00000487244 ADGRB1O14514 1584 aa10.47□□□□□ -0.73
UBE4B-209ENST00000487244 GABBR2O75899 941 aa10.46□□□□□ -0.73
UBE4B-209ENST00000487244 DCAF8Q5TAQ9 597 aa10.46□□□□□ -0.73
UBE4B-209ENST00000487244 DCAF11Q8TEB1 546 aa10.46□□□□□ -0.73
UBE4B-209ENST00000487244 KDM2AQ9Y2K7 1162 aa10.46□□□□□ -0.73
UBE4B-209ENST00000487244 LRPPRCP42704 1394 aaKnown RBP10.46□□□□□ -0.74
UBE4B-209ENST00000487244 TECPR2O15040 1411 aa10.46□□□□□ -0.74
UBE4B-209ENST00000487244 MST1RQ04912 1400 aa10.46□□□□□ -0.74
UBE4B-209ENST00000487244 YTHDC2Q9H6S0 1430 aaKnown RBP10.46□□□□□ -0.74
UBE4B-209ENST00000487244 PLEKHH1Q9ULM0 1364 aa10.45□□□□□ -0.74
UBE4B-209ENST00000487244 PHF12Q96QT6 1004 aa10.45□□□□□ -0.74
UBE4B-209ENST00000487244 C14orf93Q9H972 538 aaKnown RBP10.45□□□□□ -0.74
UBE4B-209ENST00000487244 COL16A1Q07092 1604 aaPredicted RBP10.44□□□□□ -0.74
UBE4B-209ENST00000487244 MED1Q15648 1581 aaPredicted RBP10.44□□□□□ -0.74
UBE4B-209ENST00000487244 ATF3P18847 181 aa10.44□□□□□ -0.74
UBE4B-209ENST00000487244 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
UBE4B-209ENST00000487244 SIN3AQ96ST3 1273 aa10.44□□□□□ -0.74
UBE4B-209ENST00000487244 CCDC61Q9Y6R9 512 aa10.44□□□□□ -0.74
UBE4B-209ENST00000487244 CDC42BPGQ6DT37 1551 aa10.43□□□□□ -0.74
UBE4B-209ENST00000487244 ABCC11Q96J66 1382 aa10.43□□□□□ -0.74
UBE4B-209ENST00000487244 WAPLQ7Z5K2 1190 aa10.43□□□□□ -0.74
UBE4B-209ENST00000487244 NHSL1Q5SYE7 1610 aa10.43□□□□□ -0.74
UBE4B-209ENST00000487244 AHDC1Q5TGY3 1603 aaPredicted RBP10.43□□□□□ -0.74
UBE4B-209ENST00000487244 ARHGEF28Q8N1W1 1705 aaKnown RBP10.42□□□□□ -0.74
UBE4B-209ENST00000487244 BRINP3Q76B58 766 aa10.42□□□□□ -0.74
UBE4B-209ENST00000487244 C1orf167Q5SNV9 1468 aa10.42□□□□□ -0.74
UBE4B-209ENST00000487244 RGPD8O14715 1765 aaPredicted RBP10.42□□□□□ -0.74
UBE4B-209ENST00000487244 FMN2Q9NZ56 1722 aa10.41□□□□□ -0.74
UBE4B-209ENST00000487244 KIAA1210Q9ULL0 1709 aa10.41□□□□□ -0.74
UBE4B-209ENST00000487244 GSE1Q14687 1217 aa10.41□□□□□ -0.74
UBE4B-209ENST00000487244 DISP3Q9P2K9 1392 aa10.4□□□□□ -0.74
UBE4B-209ENST00000487244 DLC1Q96QB1 1528 aa10.4□□□□□ -0.74
UBE4B-209ENST00000487244 NEUROD1Q13562 356 aa10.39□□□□□ -0.75
UBE4B-209ENST00000487244 SAFB2Q14151 953 aaKnown RBP eCLIP10.39□□□□□ -0.75
UBE4B-209ENST00000487244 DDX17Q92841 729 aaKnown RBP10.39□□□□□ -0.75
UBE4B-209ENST00000487244 L3MBTL2Q969R5 705 aa10.38□□□□□ -0.75
UBE4B-209ENST00000487244 PRAM1Q96QH2 718 aa10.38□□□□□ -0.75
UBE4B-209ENST00000487244 TRAK1Q9UPV9 953 aa10.38□□□□□ -0.75
UBE4B-209ENST00000487244 ADGRB2O60241 1585 aa10.38□□□□□ -0.75
UBE4B-209ENST00000487244 SHPRHQ149N8 1683 aa10.38□□□□□ -0.75
UBE4B-209ENST00000487244 TRPM1Q7Z4N2 1603 aa10.37□□□□□ -0.75
UBE4B-209ENST00000487244 USP32Q8NFA0 1604 aa10.37□□□□□ -0.75
UBE4B-209ENST00000487244 NUTM2FA1L443 756 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms