RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 SRPK2P78362 688 aaKnown RBP18.26■□□□□ 0.51
RXRB-205ENST00000483821 SLC26A8Q96RN1 970 aa18.26■□□□□ 0.51
RXRB-205ENST00000483821 TMC1Q8TDI8 760 aa18.25■□□□□ 0.51
RXRB-205ENST00000483821 KNDC1Q76NI1 1749 aa18.24■□□□□ 0.51
RXRB-205ENST00000483821 WAPLQ7Z5K2 1190 aa18.24■□□□□ 0.51
RXRB-205ENST00000483821 NPC1L1Q9UHC9 1359 aa18.23■□□□□ 0.51
RXRB-205ENST00000483821 CPS1P31327 1500 aa18.23■□□□□ 0.51
RXRB-205ENST00000483821 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
RXRB-205ENST00000483821 AMOTL2Q9Y2J4 779 aa18.22■□□□□ 0.51
RXRB-205ENST00000483821 TULP4Q9NRJ4 1543 aa18.22■□□□□ 0.51
RXRB-205ENST00000483821 YTHDC1Q96MU7 727 aaKnown RBP18.21■□□□□ 0.51
RXRB-205ENST00000483821 CABP2Q9NPB3 220 aa18.21■□□□□ 0.51
RXRB-205ENST00000483821 MYBBP1AQ9BQG0 1328 aaKnown RBP18.21■□□□□ 0.51
RXRB-205ENST00000483821 MRS2Q9HD23 443 aa18.2■□□□□ 0.5
RXRB-205ENST00000483821 TERF2IPQ9NYB0 399 aa18.2■□□□□ 0.5
RXRB-205ENST00000483821 WASLO00401 505 aaPredicted RBP18.19■□□□□ 0.5
RXRB-205ENST00000483821 SLC12A5Q9H2X9 1139 aa18.19■□□□□ 0.5
RXRB-205ENST00000483821 PARD3Q8TEW0 1356 aa18.18■□□□□ 0.5
RXRB-205ENST00000483821 ROBO2Q9HCK4 1378 aa18.18■□□□□ 0.5
RXRB-205ENST00000483821 PLEKHH1Q9ULM0 1364 aa18.18■□□□□ 0.5
RXRB-205ENST00000483821 NPHP4O75161 1426 aaPredicted RBP18.18■□□□□ 0.5
RXRB-205ENST00000483821 PTCH1Q13635 1447 aa18.18■□□□□ 0.5
RXRB-205ENST00000483821 MYOM1P52179 1685 aa18.18■□□□□ 0.5
RXRB-205ENST00000483821 ANKRD36BQ8N2N9 1353 aa18.17■□□□□ 0.5
RXRB-205ENST00000483821 CNGB1Q14028 1251 aaPredicted RBP18.17■□□□□ 0.5
RXRB-205ENST00000483821 AMER1Q5JTC6 1135 aaPredicted RBP18.17■□□□□ 0.5
RXRB-205ENST00000483821 CC2D1BQ5T0F9 858 aaKnown RBP18.17■□□□□ 0.5
RXRB-205ENST00000483821 HDGFL2Q7Z4V5 671 aaPredicted RBP18.16■□□□□ 0.5
RXRB-205ENST00000483821 NLRP13Q86W25 1043 aa18.16■□□□□ 0.5
RXRB-205ENST00000483821 BRD4O60885 1362 aaPredicted RBP18.16■□□□□ 0.5
RXRB-205ENST00000483821 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
RXRB-205ENST00000483821 KDM4FA0A1W2PPD8 638 aa18.15■□□□□ 0.5
RXRB-205ENST00000483821 CARD14Q9BXL6 1004 aa18.14■□□□□ 0.49
RXRB-205ENST00000483821 CGNL1Q0VF96 1302 aa18.14■□□□□ 0.49
RXRB-205ENST00000483821 CCDC61Q9Y6R9 512 aa18.12■□□□□ 0.49
RXRB-205ENST00000483821 NCKAP5LQ9HCH0 1330 aa18.12■□□□□ 0.49
RXRB-205ENST00000483821 NUDT16Q96DE0 195 aaKnown RBP18.11■□□□□ 0.49
RXRB-205ENST00000483821 NSD2O96028 1365 aa18.11■□□□□ 0.49
RXRB-205ENST00000483821 ADGRB2O60241 1585 aa18.1■□□□□ 0.49
RXRB-205ENST00000483821 NSD3Q9BZ95 1437 aa18.1■□□□□ 0.49
RXRB-205ENST00000483821 KCNA6P17658 529 aa18.1■□□□□ 0.49
RXRB-205ENST00000483821 CABP1Q9NZU7 370 aa18.1■□□□□ 0.49
RXRB-205ENST00000483821 XRN1Q8IZH2 1706 aaKnown RBP18.09■□□□□ 0.49
RXRB-205ENST00000483821 ATP7BP35670 1465 aa18.08■□□□□ 0.49
RXRB-205ENST00000483821 ZNF692Q9BU19 519 aaPredicted RBP18.08■□□□□ 0.48
RXRB-205ENST00000483821 CCDC184Q52MB2 194 aa18.07■□□□□ 0.48
RXRB-205ENST00000483821 MORC1Q86VD1 984 aa18.07■□□□□ 0.48
RXRB-205ENST00000483821 A0A1W2PP64 1363 aa18.06■□□□□ 0.48
RXRB-205ENST00000483821 USP32Q8NFA0 1604 aa18.06■□□□□ 0.48
RXRB-205ENST00000483821 PPP2R1AP30153 589 aa18.05■□□□□ 0.48
RXRB-205ENST00000483821 FAM9BQ8IZU0 186 aa18.05■□□□□ 0.48
RXRB-205ENST00000483821 PPIP5K1Q6PFW1 1433 aa18.05■□□□□ 0.48
RXRB-205ENST00000483821 PNISRQ8TF01 805 aaKnown RBP18.04■□□□□ 0.48
RXRB-205ENST00000483821 CHD2O14647 1828 aaKnown RBP18.04■□□□□ 0.48
RXRB-205ENST00000483821 PLEKHG3A1L390 1219 aa18.03■□□□□ 0.48
RXRB-205ENST00000483821 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.03■□□□□ 0.48
RXRB-205ENST00000483821 ANKARQ7Z5J8 1434 aa18.01■□□□□ 0.47
RXRB-205ENST00000483821 CD163L1Q9NR16 1453 aa18.01■□□□□ 0.47
RXRB-205ENST00000483821 CPSF1Q10570 1443 aaKnown RBP18■□□□□ 0.47
RXRB-205ENST00000483821 EDC4Q6P2E9 1401 aaKnown RBP17.99■□□□□ 0.47
RXRB-205ENST00000483821 HSPA2P54652 639 aa17.99■□□□□ 0.47
RXRB-205ENST00000483821 HNRNPUQ00839 825 aaKnown RBP eCLIP17.99■□□□□ 0.47
RXRB-205ENST00000483821 PROSER2Q86WR7 435 aaPredicted RBP17.99■□□□□ 0.47
RXRB-205ENST00000483821 INSRP06213 1382 aa17.99■□□□□ 0.47
RXRB-205ENST00000483821 PRR36Q9H6K5 1346 aa17.98■□□□□ 0.47
RXRB-205ENST00000483821 C14orf37Q86TY3 774 aa17.98■□□□□ 0.47
RXRB-205ENST00000483821 NKTRP30414 1462 aaKnown RBP17.98■□□□□ 0.47
RXRB-205ENST00000483821 LMTK3Q96Q04 1460 aa17.98■□□□□ 0.47
RXRB-205ENST00000483821 NWD1Q149M9 1564 aa17.97■□□□□ 0.47
RXRB-205ENST00000483821 CDC42BPGQ6DT37 1551 aa17.97■□□□□ 0.47
RXRB-205ENST00000483821 FYB1O15117 783 aa17.97■□□□□ 0.47
RXRB-205ENST00000483821 ADGRL3Q9HAR2 1447 aa17.97■□□□□ 0.47
RXRB-205ENST00000483821 CFAP53Q96M91 514 aa17.96■□□□□ 0.47
RXRB-205ENST00000483821 NCOA3Q9Y6Q9 1424 aa17.96■□□□□ 0.47
RXRB-205ENST00000483821 WDR43Q15061 677 aaKnown RBP eCLIP17.95■□□□□ 0.46
RXRB-205ENST00000483821 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
RXRB-205ENST00000483821 ACEP12821 1306 aa17.95■□□□□ 0.46
RXRB-205ENST00000483821 NGDNQ8NEJ9 315 aaKnown RBP17.94■□□□□ 0.46
RXRB-205ENST00000483821 NUTM2FA1L443 756 aa17.93■□□□□ 0.46
RXRB-205ENST00000483821 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.93■□□□□ 0.46
RXRB-205ENST00000483821 GGNBP2Q9H3C7 697 aa17.93■□□□□ 0.46
RXRB-205ENST00000483821 POLR3AO14802 1390 aaPredicted RBP17.92■□□□□ 0.46
RXRB-205ENST00000483821 C19orf44Q9H6X5 657 aa17.92■□□□□ 0.46
RXRB-205ENST00000483821 SCAF1Q9H7N4 1312 aaKnown RBP17.92■□□□□ 0.46
RXRB-205ENST00000483821 ITSN1Q15811 1721 aa17.92■□□□□ 0.46
RXRB-205ENST00000483821 TOPAZ1Q8N9V7 1692 aa17.91■□□□□ 0.46
RXRB-205ENST00000483821 TTC21AQ8NDW8 1320 aa17.91■□□□□ 0.46
RXRB-205ENST00000483821 TNNT2P45379 298 aaPredicted RBP17.9■□□□□ 0.46
RXRB-205ENST00000483821 COG3Q96JB2 828 aa17.9■□□□□ 0.46
RXRB-205ENST00000483821 ZBED9Q6R2W3 1325 aa17.9■□□□□ 0.46
RXRB-205ENST00000483821 MTHFSP49914 203 aa17.89■□□□□ 0.45
RXRB-205ENST00000483821 TTC21BQ7Z4L5 1316 aa17.89■□□□□ 0.45
RXRB-205ENST00000483821 FMN2Q9NZ56 1722 aa17.89■□□□□ 0.45
RXRB-205ENST00000483821 USP6P35125 1406 aa17.89■□□□□ 0.45
RXRB-205ENST00000483821 PHF8Q9UPP1 1060 aa17.88■□□□□ 0.45
RXRB-205ENST00000483821 AKAP12Q02952 1782 aa17.87■□□□□ 0.45
RXRB-205ENST00000483821 ATF3P18847 181 aa17.87■□□□□ 0.45
RXRB-205ENST00000483821 PMFBP1Q8TBY8 1022 aa17.87■□□□□ 0.45
RXRB-205ENST00000483821 MON2Q7Z3U7 1717 aa17.86■□□□□ 0.45
RXRB-205ENST00000483821 NUDCQ9Y266 331 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms