RNA–Protein interactions for RNA: ENST00000479994.1

HCLS1-206, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-206ENST00000479994 NCOA3Q9Y6Q9 1424 aa16.48■□□□□ 0.23
HCLS1-206ENST00000479994 VGFO15240 615 aaPredicted RBP16.48■□□□□ 0.23
HCLS1-206ENST00000479994 USP21Q9UK80 565 aa16.48■□□□□ 0.23
HCLS1-206ENST00000479994 ADAMTS2O95450 1211 aa16.47■□□□□ 0.23
HCLS1-206ENST00000479994 C14orf37Q86TY3 774 aa16.47■□□□□ 0.23
HCLS1-206ENST00000479994 PNPLA6Q8IY17 1366 aa16.47■□□□□ 0.23
HCLS1-206ENST00000479994 ATRNO75882 1429 aa16.46■□□□□ 0.23
HCLS1-206ENST00000479994 ATF3P18847 181 aa16.46■□□□□ 0.23
HCLS1-206ENST00000479994 L3MBTL2Q969R5 705 aa16.46■□□□□ 0.23
HCLS1-206ENST00000479994 LRRC59Q96AG4 307 aaKnown RBP16.46■□□□□ 0.23
HCLS1-206ENST00000479994 RGL3Q3MIN7 710 aa16.45■□□□□ 0.22
HCLS1-206ENST00000479994 DCAF11Q8TEB1 546 aa16.45■□□□□ 0.22
HCLS1-206ENST00000479994 ASXL1Q8IXJ9 1541 aa16.45■□□□□ 0.22
HCLS1-206ENST00000479994 SENP3-EIF4A1A0A087X0R7 540 aa16.44■□□□□ 0.22
HCLS1-206ENST00000479994 C19orf44Q9H6X5 657 aa16.44■□□□□ 0.22
HCLS1-206ENST00000479994 RIMS2Q9UQ26 1411 aa16.44■□□□□ 0.22
HCLS1-206ENST00000479994 NRXN1Q9ULB1 1477 aa16.43■□□□□ 0.22
HCLS1-206ENST00000479994 PPP1R15AO75807 674 aaPredicted RBP16.43■□□□□ 0.22
HCLS1-206ENST00000479994 BCANQ96GW7 911 aa16.42■□□□□ 0.22
HCLS1-206ENST00000479994 TRPM1Q7Z4N2 1603 aa16.41■□□□□ 0.22
HCLS1-206ENST00000479994 FNBP4Q8N3X1 1017 aaPredicted RBP16.41■□□□□ 0.22
HCLS1-206ENST00000479994 PRAG1Q86YV5 1406 aa16.41■□□□□ 0.22
HCLS1-206ENST00000479994 BRWD3Q6RI45 1802 aa16.39■□□□□ 0.21
HCLS1-206ENST00000479994 PIK3C2GO75747 1445 aa16.38■□□□□ 0.21
HCLS1-206ENST00000479994 RALGAPBQ86X10 1494 aa16.38■□□□□ 0.21
HCLS1-206ENST00000479994 SF3B2Q13435 895 aaKnown RBP16.37■□□□□ 0.21
HCLS1-206ENST00000479994 DDX17Q92841 729 aaKnown RBP16.37■□□□□ 0.21
HCLS1-206ENST00000479994 PLEKHG1Q9ULL1 1385 aa16.37■□□□□ 0.21
HCLS1-206ENST00000479994 KDM2AQ9Y2K7 1162 aa16.36■□□□□ 0.21
HCLS1-206ENST00000479994 MST1RQ04912 1400 aa16.32■□□□□ 0.2
HCLS1-206ENST00000479994 PTCH1Q13635 1447 aa16.32■□□□□ 0.2
HCLS1-206ENST00000479994 GJD4Q96KN9 370 aaPredicted RBP16.32■□□□□ 0.2
HCLS1-206ENST00000479994 NRXN3Q9Y4C0 1643 aa16.31■□□□□ 0.2
HCLS1-206ENST00000479994 ROCK2O75116 1388 aaKnown RBP16.3■□□□□ 0.2
HCLS1-206ENST00000479994 GPRASP1Q5JY77 1395 aa16.3■□□□□ 0.2
HCLS1-206ENST00000479994 ADGRF5Q8IZF2 1346 aa16.3■□□□□ 0.2
HCLS1-206ENST00000479994 R3HDM1Q15032 1099 aaKnown RBP16.3■□□□□ 0.2
HCLS1-206ENST00000479994 C14orf93Q9H972 538 aaKnown RBP16.3■□□□□ 0.2
HCLS1-206ENST00000479994 TBX22Q9Y458 520 aa16.3■□□□□ 0.2
HCLS1-206ENST00000479994 DCCP43146 1447 aa16.29■□□□□ 0.2
HCLS1-206ENST00000479994 PIK3R4Q99570 1358 aa16.29■□□□□ 0.2
HCLS1-206ENST00000479994 KNDC1Q76NI1 1749 aa16.29■□□□□ 0.2
HCLS1-206ENST00000479994 EIF3AQ14152 1382 aaKnown RBP16.28■□□□□ 0.2
HCLS1-206ENST00000479994 SLC24A1O60721 1099 aa16.28■□□□□ 0.2
HCLS1-206ENST00000479994 ZNF784Q8NCA9 323 aaPredicted RBP16.28■□□□□ 0.2
HCLS1-206ENST00000479994 GLI3P10071 1580 aa16.28■□□□□ 0.2
HCLS1-206ENST00000479994 MARF1Q9Y4F3 1742 aaKnown RBP16.28■□□□□ 0.2
HCLS1-206ENST00000479994 C1QTNF8P60827 252 aa16.27■□□□□ 0.2
HCLS1-206ENST00000479994 CEP350Q5VT06 3117 aa16.26■□□□□ 0.19
HCLS1-206ENST00000479994 NBPF8Q3BBV2 869 aa16.26■□□□□ 0.19
HCLS1-206ENST00000479994 BAG6P46379 1132 aa16.25■□□□□ 0.19
HCLS1-206ENST00000479994 ADGRB1O14514 1584 aa16.25■□□□□ 0.19
HCLS1-206ENST00000479994 CARD11Q9BXL7 1154 aa16.24■□□□□ 0.19
HCLS1-206ENST00000479994 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.24■□□□□ 0.19
HCLS1-206ENST00000479994 COL22A1Q8NFW1 1626 aaPredicted RBP16.23■□□□□ 0.19
HCLS1-206ENST00000479994 ADAMTS13Q76LX8 1427 aa16.23■□□□□ 0.19
HCLS1-206ENST00000479994 DLC1Q96QB1 1528 aa16.23■□□□□ 0.19
HCLS1-206ENST00000479994 ARHGEF28Q8N1W1 1705 aaKnown RBP16.22■□□□□ 0.19
HCLS1-206ENST00000479994 CFAP70Q5T0N1 1121 aa16.22■□□□□ 0.19
HCLS1-206ENST00000479994 CAMTA1Q9Y6Y1 1673 aa16.21■□□□□ 0.19
HCLS1-206ENST00000479994 EIF4G2P78344 907 aaKnown RBP eCLIP16.21■□□□□ 0.19
HCLS1-206ENST00000479994 YTHDC2Q9H6S0 1430 aaKnown RBP16.2■□□□□ 0.18
HCLS1-206ENST00000479994 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
HCLS1-206ENST00000479994 XRN1Q8IZH2 1706 aaKnown RBP16.19■□□□□ 0.18
HCLS1-206ENST00000479994 LRPPRCP42704 1394 aaKnown RBP16.19■□□□□ 0.18
HCLS1-206ENST00000479994 USP47Q96K76 1375 aa16.19■□□□□ 0.18
HCLS1-206ENST00000479994 EN1Q05925 392 aaPredicted RBP16.19■□□□□ 0.18
HCLS1-206ENST00000479994 SEPT12Q8IYM1 358 aa16.19■□□□□ 0.18
HCLS1-206ENST00000479994 SIRT1Q96EB6 747 aa16.19■□□□□ 0.18
HCLS1-206ENST00000479994 AMOTL2Q9Y2J4 779 aa16.19■□□□□ 0.18
HCLS1-206ENST00000479994 TECPR2O15040 1411 aa16.19■□□□□ 0.18
HCLS1-206ENST00000479994 PTPRUQ92729 1446 aa16.19■□□□□ 0.18
HCLS1-206ENST00000479994 SOS2Q07890 1332 aaPredicted RBP16.19■□□□□ 0.18
HCLS1-206ENST00000479994 ABCC11Q96J66 1382 aa16.18■□□□□ 0.18
HCLS1-206ENST00000479994 QRICH2Q9H0J4 1663 aa16.17■□□□□ 0.18
HCLS1-206ENST00000479994 NBPF1Q3BBV0 1214 aa16.16■□□□□ 0.18
HCLS1-206ENST00000479994 SBNO2Q9Y2G9 1366 aa16.15■□□□□ 0.18
HCLS1-206ENST00000479994 RGPD1P0DJD0 1748 aa16.14■□□□□ 0.17
HCLS1-206ENST00000479994 KRT27Q7Z3Y8 459 aa16.14■□□□□ 0.17
HCLS1-206ENST00000479994 UNC5CLQ8IV45 518 aa16.14■□□□□ 0.17
HCLS1-206ENST00000479994 METP08581 1390 aa16.13■□□□□ 0.17
HCLS1-206ENST00000479994 NALCNQ8IZF0 1738 aa16.12■□□□□ 0.17
HCLS1-206ENST00000479994 SLIT2O94813 1529 aa16.12■□□□□ 0.17
HCLS1-206ENST00000479994 CENPJQ9HC77 1338 aaPredicted RBP16.12■□□□□ 0.17
HCLS1-206ENST00000479994 C1orf167Q5SNV9 1468 aa16.11■□□□□ 0.17
HCLS1-206ENST00000479994 CDCA8Q53HL2 280 aa16.11■□□□□ 0.17
HCLS1-206ENST00000479994 TMEM132EQ6IEE7 984 aa16.11■□□□□ 0.17
HCLS1-206ENST00000479994 NINLQ9Y2I6 1382 aa16.11■□□□□ 0.17
HCLS1-206ENST00000479994 UTRNP46939 3433 aa16.1■□□□□ 0.17
HCLS1-206ENST00000479994 ONECUT3O60422 494 aaPredicted RBP16.1■□□□□ 0.17
HCLS1-206ENST00000479994 ADGRL3Q9HAR2 1447 aa16.1■□□□□ 0.17
HCLS1-206ENST00000479994 CHD4Q14839 1912 aa16.09■□□□□ 0.17
HCLS1-206ENST00000479994 TNS1Q9HBL0 1735 aaKnown RBP16.09■□□□□ 0.17
HCLS1-206ENST00000479994 POGKQ9P215 609 aa16.09■□□□□ 0.17
HCLS1-206ENST00000479994 PPP1R1BQ9UD71 204 aaPredicted RBP16.09■□□□□ 0.17
HCLS1-206ENST00000479994 TRAK1Q9UPV9 953 aa16.09■□□□□ 0.17
HCLS1-206ENST00000479994 ADGRB2O60241 1585 aa16.09■□□□□ 0.17
HCLS1-206ENST00000479994 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.16
HCLS1-206ENST00000479994 ORAI2Q96SN7 254 aa16.08■□□□□ 0.16
HCLS1-206ENST00000479994 EZH2Q15910 746 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms