RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 COG6Q9Y2V7 657 aa10.35□□□□□ -0.75
BRAF-203ENST00000479537 USP17L8P0C7I0 530 aa10.33□□□□□ -0.76
BRAF-203ENST00000479537 FUT2Q10981 343 aa10.33□□□□□ -0.76
BRAF-203ENST00000479537 KMT5BQ4FZB7 885 aa10.33□□□□□ -0.76
BRAF-203ENST00000479537 WWC1Q8IX03 1113 aa10.33□□□□□ -0.76
BRAF-203ENST00000479537 MTMR14Q8NCE2 650 aa10.33□□□□□ -0.76
BRAF-203ENST00000479537 ZFRQ96KR1 1074 aaKnown RBP10.33□□□□□ -0.76
BRAF-203ENST00000479537 ZNF777Q9ULD5 760 aaPredicted RBP10.33□□□□□ -0.76
BRAF-203ENST00000479537 C6orf229H3BNL8 230 aa10.32□□□□□ -0.76
BRAF-203ENST00000479537 LRCH3Q96II8 777 aa10.32□□□□□ -0.76
BRAF-203ENST00000479537 PCDHGC3Q9UN70 934 aa10.32□□□□□ -0.76
BRAF-203ENST00000479537 MTMR2Q13614 643 aa10.31□□□□□ -0.76
BRAF-203ENST00000479537 NECTIN2Q92692 538 aa10.31□□□□□ -0.76
BRAF-203ENST00000479537 GDPD2Q9HCC8 539 aa10.31□□□□□ -0.76
BRAF-203ENST00000479537 ABL2P42684 1182 aa10.3□□□□□ -0.76
BRAF-203ENST00000479537 CCDC82Q8N4S0 544 aa10.3□□□□□ -0.76
BRAF-203ENST00000479537 HELBQ8NG08 1087 aaPredicted RBP10.3□□□□□ -0.76
BRAF-203ENST00000479537 ATP6V1AP38606 617 aa10.29□□□□□ -0.76
BRAF-203ENST00000479537 SPNS2Q8IVW8 549 aa10.29□□□□□ -0.76
BRAF-203ENST00000479537 WNT2BQ93097 391 aa10.29□□□□□ -0.76
BRAF-203ENST00000479537 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.29□□□□□ -0.76
BRAF-203ENST00000479537 ZNF330Q9Y3S2 320 aaPredicted RBP10.29□□□□□ -0.76
BRAF-203ENST00000479537 FNBP4Q8N3X1 1017 aaPredicted RBP10.28□□□□□ -0.76
BRAF-203ENST00000479537 ANKK1Q8NFD2 765 aa10.28□□□□□ -0.76
BRAF-203ENST00000479537 KCTD12Q96CX2 325 aaKnown RBP10.28□□□□□ -0.76
BRAF-203ENST00000479537 CCDC97Q96F63 343 aaPredicted RBP10.27□□□□□ -0.77
BRAF-203ENST00000479537 MYT1LQ9UL68 1186 aa10.27□□□□□ -0.77
BRAF-203ENST00000479537 TBC1D2BQ9UPU7 963 aa10.26□□□□□ -0.77
BRAF-203ENST00000479537 BCAMP50895 628 aa10.25□□□□□ -0.77
BRAF-203ENST00000479537 CTDSPL2Q05D32 466 aa10.25□□□□□ -0.77
BRAF-203ENST00000479537 SOCS7O14512 581 aa10.24□□□□□ -0.77
BRAF-203ENST00000479537 PUS10Q3MIT2 529 aaKnown RBP10.24□□□□□ -0.77
BRAF-203ENST00000479537 SYMPKQ92797 1274 aaKnown RBP10.24□□□□□ -0.77
BRAF-203ENST00000479537 PRR14Q9BWN1 585 aa10.24□□□□□ -0.77
BRAF-203ENST00000479537 NDUFB9Q9Y6M9 179 aa10.24□□□□□ -0.77
BRAF-203ENST00000479537 CFAP99D6REC4 459 aa10.23□□□□□ -0.77
BRAF-203ENST00000479537 SOWAHBA6NEL2 793 aa10.22□□□□□ -0.77
BRAF-203ENST00000479537 PPP4CP60510 307 aa10.22□□□□□ -0.77
BRAF-203ENST00000479537 PRR7Q8TB68 274 aa10.22□□□□□ -0.77
BRAF-203ENST00000479537 HPS5Q9UPZ3 1129 aa10.22□□□□□ -0.77
BRAF-203ENST00000479537 ACTN4O43707 911 aaKnown RBP10.21□□□□□ -0.77
BRAF-203ENST00000479537 Q3C1V9 767 aa10.21□□□□□ -0.77
BRAF-203ENST00000479537 LRRN4Q8WUT4 740 aa10.21□□□□□ -0.77
BRAF-203ENST00000479537 HMX1Q9NP08 348 aaPredicted RBP10.21□□□□□ -0.77
BRAF-203ENST00000479537 SERPINA10Q9UK55 444 aa10.21□□□□□ -0.77
BRAF-203ENST00000479537 PTPN5P54829 565 aa10.2□□□□□ -0.78
BRAF-203ENST00000479537 MORN1Q5T089 497 aa10.2□□□□□ -0.78
BRAF-203ENST00000479537 THSD4Q6ZMP0 1018 aa10.2□□□□□ -0.78
BRAF-203ENST00000479537 RETREG3Q86VR2 466 aa10.19□□□□□ -0.78
BRAF-203ENST00000479537 RNF166Q96A37 237 aaPredicted RBP10.19□□□□□ -0.78
BRAF-203ENST00000479537 GJD4Q96KN9 370 aaPredicted RBP10.19□□□□□ -0.78
BRAF-203ENST00000479537 SLC27A5Q9Y2P5 690 aa10.19□□□□□ -0.78
BRAF-203ENST00000479537 PLSCR2Q9NRY7 297 aa10.18□□□□□ -0.78
BRAF-203ENST00000479537 CALR3Q96L12 384 aaKnown RBP10.17□□□□□ -0.78
BRAF-203ENST00000479537 MMRN1Q13201 1228 aa10.16□□□□□ -0.78
BRAF-203ENST00000479537 WBP1LQ9NX94 342 aa10.16□□□□□ -0.78
BRAF-203ENST00000479537 TSR3Q9UJK0 312 aaKnown RBP10.16□□□□□ -0.78
BRAF-203ENST00000479537 PCDHB3Q9Y5E6 796 aa10.16□□□□□ -0.78
BRAF-203ENST00000479537 POM121CA8CG34 1229 aa10.15□□□□□ -0.78
BRAF-203ENST00000479537 APLP1P51693 650 aa10.15□□□□□ -0.78
BRAF-203ENST00000479537 TRIM34Q9BYJ4 488 aa10.15□□□□□ -0.78
BRAF-203ENST00000479537 GLMNQ92990 594 aa10.14□□□□□ -0.79
BRAF-203ENST00000479537 NR1I2O75469 434 aa10.13□□□□□ -0.79
BRAF-203ENST00000479537 WASHC4Q2M389 1173 aa10.13□□□□□ -0.79
BRAF-203ENST00000479537 BLOC1S3Q6QNY0 202 aa10.13□□□□□ -0.79
BRAF-203ENST00000479537 RNF19BQ6ZMZ0 732 aa10.13□□□□□ -0.79
BRAF-203ENST00000479537 PER1O15534 1290 aaPredicted RBP10.12□□□□□ -0.79
BRAF-203ENST00000479537 FMNL1O95466 1100 aaPredicted RBP10.12□□□□□ -0.79
BRAF-203ENST00000479537 IRF5Q13568 498 aa10.12□□□□□ -0.79
BRAF-203ENST00000479537 NR6A1Q15406 480 aa10.12□□□□□ -0.79
BRAF-203ENST00000479537 EPS8L1Q8TE68 723 aa10.12□□□□□ -0.79
BRAF-203ENST00000479537 USB1Q9BQ65 265 aaKnown RBP10.12□□□□□ -0.79
BRAF-203ENST00000479537 PNMA1Q8ND90 353 aa10.11□□□□□ -0.79
BRAF-203ENST00000479537 VAC14Q08AM6 782 aa10.1□□□□□ -0.79
BRAF-203ENST00000479537 SCUBE3Q8IX30 993 aa10.1□□□□□ -0.79
BRAF-203ENST00000479537 DESI1Q6ICB0 168 aa10.09□□□□□ -0.79
BRAF-203ENST00000479537 HDGFL1Q5TGJ6 251 aa10.08□□□□□ -0.8
BRAF-203ENST00000479537 LYPD8Q6UX82 237 aa10.08□□□□□ -0.8
BRAF-203ENST00000479537 HCSTQ9UBK5 93 aa10.08□□□□□ -0.8
BRAF-203ENST00000479537 BRICD5Q6PL45 260 aa10.07□□□□□ -0.8
BRAF-203ENST00000479537 SALL2Q9Y467 1007 aaPredicted RBP10.07□□□□□ -0.8
BRAF-203ENST00000479537 GPR37L1O60883 481 aa10.06□□□□□ -0.8
BRAF-203ENST00000479537 PDIA4P13667 645 aaKnown RBP10.06□□□□□ -0.8
BRAF-203ENST00000479537 COPS2P61201 443 aa10.06□□□□□ -0.8
BRAF-203ENST00000479537 JUNDP17535 347 aa10.04□□□□□ -0.8
BRAF-203ENST00000479537 CTHP32929 405 aa10.04□□□□□ -0.8
BRAF-203ENST00000479537 NYAP1Q6ZVC0 841 aa10.03□□□□□ -0.8
BRAF-203ENST00000479537 THAP11Q96EK4 314 aa10.03□□□□□ -0.8
BRAF-203ENST00000479537 SPSB2Q99619 263 aa10.03□□□□□ -0.8
BRAF-203ENST00000479537 SEMA3FQ13275 785 aa10.01□□□□□ -0.81
BRAF-203ENST00000479537 PTPRNQ16849 979 aa10.01□□□□□ -0.81
BRAF-203ENST00000479537 ADAMTS19Q8TE59 1207 aa10.01□□□□□ -0.81
BRAF-203ENST00000479537 MAP10Q9P2G4 905 aa10.01□□□□□ -0.81
BRAF-203ENST00000479537 RFX1P22670 979 aa10□□□□□ -0.81
BRAF-203ENST00000479537 SOX11P35716 441 aa10□□□□□ -0.81
BRAF-203ENST00000479537 CCNYL3P0C7X3 344 aa9.99□□□□□ -0.81
BRAF-203ENST00000479537 EIF4G2P78344 907 aaKnown RBP eCLIP9.99□□□□□ -0.81
BRAF-203ENST00000479537 FKBPLQ9UIM3 349 aa9.99□□□□□ -0.81
BRAF-203ENST00000479537 F12P00748 615 aaPredicted RBP9.98□□□□□ -0.81
BRAF-203ENST00000479537 MSS51Q4VC12 460 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms