RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 DDX12PQ92771 950 aa7.8□□□□□ -1.16
SPTLC3-205ENST00000476791 MYBPC2Q14324 1141 aa7.79□□□□□ -1.16
SPTLC3-205ENST00000476791 KCNK17Q96T54 332 aa7.79□□□□□ -1.16
SPTLC3-205ENST00000476791 PCDHGA10Q9Y5H3 936 aa7.79□□□□□ -1.16
SPTLC3-205ENST00000476791 TRAIPQ9BWF2 469 aa7.79□□□□□ -1.16
SPTLC3-205ENST00000476791 PDIA6Q15084 440 aa7.78□□□□□ -1.16
SPTLC3-205ENST00000476791 CC2D1BQ5T0F9 858 aaKnown RBP7.78□□□□□ -1.16
SPTLC3-205ENST00000476791 RBM26Q5T8P6 1007 aaKnown RBP7.78□□□□□ -1.16
SPTLC3-205ENST00000476791 ZNF662Q6ZS27 426 aa7.78□□□□□ -1.16
SPTLC3-205ENST00000476791 ZDHHC16Q969W1 377 aa7.78□□□□□ -1.16
SPTLC3-205ENST00000476791 KCNV2Q8TDN2 545 aa7.78□□□□□ -1.16
SPTLC3-205ENST00000476791 ADAM33Q9BZ11 813 aa7.78□□□□□ -1.16
SPTLC3-205ENST00000476791 FANCIQ9NVI1 1328 aa7.78□□□□□ -1.16
SPTLC3-205ENST00000476791 CCER2I3L3R5 266 aa7.77□□□□□ -1.17
SPTLC3-205ENST00000476791 PEX14O75381 377 aa7.77□□□□□ -1.17
SPTLC3-205ENST00000476791 DMRTA1Q5VZB9 504 aa7.77□□□□□ -1.17
SPTLC3-205ENST00000476791 MYH16Q9H6N6 1097 aa7.77□□□□□ -1.17
SPTLC3-205ENST00000476791 SSFA2P28290 1259 aa7.77□□□□□ -1.17
SPTLC3-205ENST00000476791 ARID4AP29374 1257 aaPredicted RBP7.76□□□□□ -1.17
SPTLC3-205ENST00000476791 MMRN1Q13201 1228 aa7.76□□□□□ -1.17
SPTLC3-205ENST00000476791 BCL2L12Q9HB09 334 aa7.76□□□□□ -1.17
SPTLC3-205ENST00000476791 SLC24A3Q9HC58 644 aa7.76□□□□□ -1.17
SPTLC3-205ENST00000476791 ATL2Q8NHH9 583 aa7.76□□□□□ -1.17
SPTLC3-205ENST00000476791 PPFIA4O75335 1185 aa7.75□□□□□ -1.17
SPTLC3-205ENST00000476791 CCDC184Q52MB2 194 aa7.75□□□□□ -1.17
SPTLC3-205ENST00000476791 ZNF513Q8N8E2 541 aaPredicted RBP7.75□□□□□ -1.17
SPTLC3-205ENST00000476791 KCNH8Q96L42 1107 aa7.75□□□□□ -1.17
SPTLC3-205ENST00000476791 MTA3Q9BTC8 594 aa7.75□□□□□ -1.17
SPTLC3-205ENST00000476791 ARIH1Q9Y4X5 557 aaPredicted RBP7.75□□□□□ -1.17
SPTLC3-205ENST00000476791 CENPJQ9HC77 1338 aaPredicted RBP7.75□□□□□ -1.17
SPTLC3-205ENST00000476791 SPDYE16A6NNV3 312 aaPredicted RBP7.75□□□□□ -1.17
SPTLC3-205ENST00000476791 PTPREP23469 700 aa7.75□□□□□ -1.17
SPTLC3-205ENST00000476791 OTUD6BQ8N6M0 293 aa7.75□□□□□ -1.17
SPTLC3-205ENST00000476791 RHBDL3P58872 404 aa7.74□□□□□ -1.17
SPTLC3-205ENST00000476791 RALBP1Q15311 655 aa7.74□□□□□ -1.17
SPTLC3-205ENST00000476791 TYW1BQ6NUM6 668 aa7.74□□□□□ -1.17
SPTLC3-205ENST00000476791 LMOD2Q6P5Q4 547 aa7.74□□□□□ -1.17
SPTLC3-205ENST00000476791 RBM33Q96EV2 1170 aaKnown RBP7.74□□□□□ -1.17
SPTLC3-205ENST00000476791 GRXCR2A6NFK2 248 aa7.74□□□□□ -1.17
SPTLC3-205ENST00000476791 HSP90AA1P07900 732 aaKnown RBP7.74□□□□□ -1.17
SPTLC3-205ENST00000476791 ZNF500O60304 480 aaPredicted RBP7.73□□□□□ -1.17
SPTLC3-205ENST00000476791 PTGER2P43116 358 aa7.73□□□□□ -1.17
SPTLC3-205ENST00000476791 ADGRD1Q6QNK2 874 aa7.73□□□□□ -1.17
SPTLC3-205ENST00000476791 ARHGEF1Q92888 912 aaKnown RBP7.73□□□□□ -1.17
SPTLC3-205ENST00000476791 CHMP4CQ96CF2 233 aa7.73□□□□□ -1.17
SPTLC3-205ENST00000476791 SPATA32Q96LK8 384 aa7.73□□□□□ -1.17
SPTLC3-205ENST00000476791 STK26Q9P289 416 aa7.73□□□□□ -1.17
SPTLC3-205ENST00000476791 DHX16O60231 1041 aaKnown RBP7.73□□□□□ -1.17
SPTLC3-205ENST00000476791 CEP120Q8N960 986 aa7.73□□□□□ -1.17
SPTLC3-205ENST00000476791 MICAL1Q8TDZ2 1067 aa7.73□□□□□ -1.17
SPTLC3-205ENST00000476791 MAP4K4O95819 1239 aaPredicted RBP7.72□□□□□ -1.17
SPTLC3-205ENST00000476791 CASC1Q6TDU7 716 aa7.72□□□□□ -1.17
SPTLC3-205ENST00000476791 EP400NLQ6ZTU2 488 aa7.72□□□□□ -1.17
SPTLC3-205ENST00000476791 GET4Q7L5D6 327 aaPredicted RBP7.72□□□□□ -1.17
SPTLC3-205ENST00000476791 RETREG2Q8NC44 543 aa7.72□□□□□ -1.17
SPTLC3-205ENST00000476791 FBXW7Q969H0 707 aa7.72□□□□□ -1.17
SPTLC3-205ENST00000476791 GOLGA6CA6NDK9 693 aa7.72□□□□□ -1.17
SPTLC3-205ENST00000476791 GOLGA6BA6NDN3 693 aa7.72□□□□□ -1.17
SPTLC3-205ENST00000476791 GOLGA6DP0CG33 693 aa7.72□□□□□ -1.17
SPTLC3-205ENST00000476791 SCP2P22307 547 aa7.72□□□□□ -1.17
SPTLC3-205ENST00000476791 GOLGA6AQ9NYA3 693 aa7.72□□□□□ -1.17
SPTLC3-205ENST00000476791 PNMA2Q9UL42 364 aa7.72□□□□□ -1.17
SPTLC3-205ENST00000476791 SDR16C5Q8N3Y7 309 aa7.71□□□□□ -1.17
SPTLC3-205ENST00000476791 ANP32BQ92688 251 aaKnown RBP7.71□□□□□ -1.17
SPTLC3-205ENST00000476791 BORCS6Q96GS4 357 aa7.71□□□□□ -1.17
SPTLC3-205ENST00000476791 EPAS1Q99814 870 aa7.71□□□□□ -1.17
SPTLC3-205ENST00000476791 IGSF5Q9NSI5 407 aa7.71□□□□□ -1.17
SPTLC3-205ENST00000476791 ZHX1Q9UKY1 873 aaPredicted RBP7.71□□□□□ -1.17
SPTLC3-205ENST00000476791 CT47B1P0C2W7 299 aaPredicted RBP7.71□□□□□ -1.18
SPTLC3-205ENST00000476791 ANKRD13AQ8IZ07 590 aa7.71□□□□□ -1.18
SPTLC3-205ENST00000476791 PAX3P23760 479 aa7.7□□□□□ -1.18
SPTLC3-205ENST00000476791 NBPF9Q3BBW0 867 aa7.7□□□□□ -1.18
SPTLC3-205ENST00000476791 TSPAN18Q96SJ8 248 aa7.7□□□□□ -1.18
SPTLC3-205ENST00000476791 TCERG1O14776 1098 aaKnown RBP7.7□□□□□ -1.18
SPTLC3-205ENST00000476791 MAP3K7O43318 606 aa7.7□□□□□ -1.18
SPTLC3-205ENST00000476791 RAB11FIP3O75154 756 aa7.7□□□□□ -1.18
SPTLC3-205ENST00000476791 COL9A1P20849 921 aa7.7□□□□□ -1.18
SPTLC3-205ENST00000476791 GORABQ5T7V8 394 aa7.7□□□□□ -1.18
SPTLC3-205ENST00000476791 ZC3H4Q9UPT8 1303 aaKnown RBP7.69□□□□□ -1.18
SPTLC3-205ENST00000476791 KIF4AO95239 1232 aa7.69□□□□□ -1.18
SPTLC3-205ENST00000476791 C6orf132Q5T0Z8 1188 aa7.69□□□□□ -1.18
SPTLC3-205ENST00000476791 TSR1Q2NL82 804 aaKnown RBP7.69□□□□□ -1.18
SPTLC3-205ENST00000476791 KRBA2Q6ZNG9 492 aa7.69□□□□□ -1.18
SPTLC3-205ENST00000476791 DDX46Q7L014 1031 aaKnown RBP7.69□□□□□ -1.18
SPTLC3-205ENST00000476791 CCER1Q8TC90 406 aaPredicted RBP7.69□□□□□ -1.18
SPTLC3-205ENST00000476791 TK2O00142 265 aa7.68□□□□□ -1.18
SPTLC3-205ENST00000476791 PRIM1P49642 420 aaKnown RBP7.68□□□□□ -1.18
SPTLC3-205ENST00000476791 HSP90AB3PQ58FF7 597 aa7.68□□□□□ -1.18
SPTLC3-205ENST00000476791 CREBRFQ8IUR6 639 aa7.68□□□□□ -1.18
SPTLC3-205ENST00000476791 FAM43AQ8N2R8 423 aa7.68□□□□□ -1.18
SPTLC3-205ENST00000476791 RNF166Q96A37 237 aaPredicted RBP7.68□□□□□ -1.18
SPTLC3-205ENST00000476791 ZBED2Q9BTP6 218 aa7.68□□□□□ -1.18
SPTLC3-205ENST00000476791 VPS9D1Q9Y2B5 631 aa7.68□□□□□ -1.18
SPTLC3-205ENST00000476791 KAT6BQ8WYB5 2073 aa7.68□□□□□ -1.18
SPTLC3-205ENST00000476791 EPB41L2O43491 1005 aaKnown RBP7.68□□□□□ -1.18
SPTLC3-205ENST00000476791 MLLT3P42568 568 aaPredicted RBP7.68□□□□□ -1.18
SPTLC3-205ENST00000476791 EN1Q05925 392 aaPredicted RBP7.68□□□□□ -1.18
SPTLC3-205ENST00000476791 CCDC180Q9P1Z9 1646 aa7.68□□□□□ -1.18
SPTLC3-205ENST00000476791 PPP1R3GB7ZBB8 358 aa7.67□□□□□ -1.18
SPTLC3-205ENST00000476791 RNF217Q8TC41 542 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms