RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 ZNF142P52746 1687 aaPredicted RBP26.88■■□□□ 1.89
SSR1-204ENST00000474597 SRPK2P78362 688 aaKnown RBP26.87■■□□□ 1.89
SSR1-204ENST00000474597 FAM9BQ8IZU0 186 aa26.86■■□□□ 1.89
SSR1-204ENST00000474597 CABP2Q9NPB3 220 aa26.86■■□□□ 1.89
SSR1-204ENST00000474597 WAPLQ7Z5K2 1190 aa26.85■■□□□ 1.89
SSR1-204ENST00000474597 BRD4O60885 1362 aaPredicted RBP26.85■■□□□ 1.89
SSR1-204ENST00000474597 TECPR2O15040 1411 aa26.84■■□□□ 1.89
SSR1-204ENST00000474597 SLC12A5Q9H2X9 1139 aa26.83■■□□□ 1.89
SSR1-204ENST00000474597 AMER1Q5JTC6 1135 aaPredicted RBP26.83■■□□□ 1.89
SSR1-204ENST00000474597 NLRP13Q86W25 1043 aa26.83■■□□□ 1.89
SSR1-204ENST00000474597 CPS1P31327 1500 aa26.82■■□□□ 1.88
SSR1-204ENST00000474597 SIRT1Q96EB6 747 aa26.82■■□□□ 1.88
SSR1-204ENST00000474597 ATAD2Q6PL18 1390 aa26.82■■□□□ 1.88
SSR1-204ENST00000474597 FAM135BQ49AJ0 1406 aa26.82■■□□□ 1.88
SSR1-204ENST00000474597 SLC26A8Q96RN1 970 aa26.81■■□□□ 1.88
SSR1-204ENST00000474597 NPC1L1Q9UHC9 1359 aa26.81■■□□□ 1.88
SSR1-204ENST00000474597 NINLQ9Y2I6 1382 aa26.81■■□□□ 1.88
SSR1-204ENST00000474597 DIP2AQ14689 1571 aa26.81■■□□□ 1.88
SSR1-204ENST00000474597 MED14O60244 1454 aa26.81■■□□□ 1.88
SSR1-204ENST00000474597 PLEKHH1Q9ULM0 1364 aa26.81■■□□□ 1.88
SSR1-204ENST00000474597 HNRNPUQ00839 825 aaKnown RBP eCLIP26.79■■□□□ 1.88
SSR1-204ENST00000474597 CDK19Q9BWU1 502 aa26.79■■□□□ 1.88
SSR1-204ENST00000474597 CARD14Q9BXL6 1004 aa26.79■■□□□ 1.88
SSR1-204ENST00000474597 TBX22Q9Y458 520 aa26.79■■□□□ 1.88
SSR1-204ENST00000474597 NSD3Q9BZ95 1437 aa26.77■■□□□ 1.88
SSR1-204ENST00000474597 ANKRD36BQ8N2N9 1353 aa26.76■■□□□ 1.87
SSR1-204ENST00000474597 ANKLE2Q86XL3 938 aa26.76■■□□□ 1.87
SSR1-204ENST00000474597 ROBO2Q9HCK4 1378 aa26.72■■□□□ 1.87
SSR1-204ENST00000474597 PNISRQ8TF01 805 aaKnown RBP26.72■■□□□ 1.87
SSR1-204ENST00000474597 USP32Q8NFA0 1604 aa26.71■■□□□ 1.87
SSR1-204ENST00000474597 PTPRUQ92729 1446 aa26.7■■□□□ 1.87
SSR1-204ENST00000474597 WASLO00401 505 aaPredicted RBP26.69■■□□□ 1.86
SSR1-204ENST00000474597 TERF2IPQ9NYB0 399 aa26.69■■□□□ 1.86
SSR1-204ENST00000474597 AMOTL2Q9Y2J4 779 aa26.69■■□□□ 1.86
SSR1-204ENST00000474597 CGNL1Q0VF96 1302 aa26.68■■□□□ 1.86
SSR1-204ENST00000474597 PPP2R1AP30153 589 aa26.68■■□□□ 1.86
SSR1-204ENST00000474597 HDGFL2Q7Z4V5 671 aaPredicted RBP26.66■■□□□ 1.86
SSR1-204ENST00000474597 A0A1W2PP64 1363 aa26.66■■□□□ 1.86
SSR1-204ENST00000474597 PIK3R4Q99570 1358 aa26.65■■□□□ 1.86
SSR1-204ENST00000474597 PTCH1Q13635 1447 aa26.64■■□□□ 1.86
SSR1-204ENST00000474597 CABP1Q9NZU7 370 aa26.64■■□□□ 1.85
SSR1-204ENST00000474597 ADGRB2O60241 1585 aa26.63■■□□□ 1.85
SSR1-204ENST00000474597 MORC1Q86VD1 984 aa26.62■■□□□ 1.85
SSR1-204ENST00000474597 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.62■■□□□ 1.85
SSR1-204ENST00000474597 NSD2O96028 1365 aa26.62■■□□□ 1.85
SSR1-204ENST00000474597 XRN1Q8IZH2 1706 aaKnown RBP26.61■■□□□ 1.85
SSR1-204ENST00000474597 ATP7BP35670 1465 aa26.6■■□□□ 1.85
SSR1-204ENST00000474597 CD163L1Q9NR16 1453 aa26.6■■□□□ 1.85
SSR1-204ENST00000474597 NUDT16Q96DE0 195 aaKnown RBP26.58■■□□□ 1.85
SSR1-204ENST00000474597 GTF3C3Q9Y5Q9 886 aa26.58■■□□□ 1.85
SSR1-204ENST00000474597 PPIP5K1Q6PFW1 1433 aa26.58■■□□□ 1.85
SSR1-204ENST00000474597 ZBED9Q6R2W3 1325 aa26.57■■□□□ 1.84
SSR1-204ENST00000474597 CHD2O14647 1828 aaKnown RBP26.56■■□□□ 1.84
SSR1-204ENST00000474597 SCAF1Q9H7N4 1312 aaKnown RBP26.56■■□□□ 1.84
SSR1-204ENST00000474597 NPHP4O75161 1426 aaPredicted RBP26.56■■□□□ 1.84
SSR1-204ENST00000474597 CCDC61Q9Y6R9 512 aa26.55■■□□□ 1.84
SSR1-204ENST00000474597 KCNA6P17658 529 aa26.54■■□□□ 1.84
SSR1-204ENST00000474597 WDR43Q15061 677 aaKnown RBP eCLIP26.52■■□□□ 1.84
SSR1-204ENST00000474597 KIF20BQ96Q89 1820 aa26.52■■□□□ 1.84
SSR1-204ENST00000474597 ANKRD26Q9UPS8 1709 aa26.52■■□□□ 1.84
SSR1-204ENST00000474597 TNNT2P45379 298 aaPredicted RBP26.51■■□□□ 1.83
SSR1-204ENST00000474597 ITSN1Q15811 1721 aa26.51■■□□□ 1.83
SSR1-204ENST00000474597 CDC42BPGQ6DT37 1551 aa26.5■■□□□ 1.83
SSR1-204ENST00000474597 NCKAP5LQ9HCH0 1330 aa26.5■■□□□ 1.83
SSR1-204ENST00000474597 INSRP06213 1382 aa26.49■■□□□ 1.83
SSR1-204ENST00000474597 PRR36Q9H6K5 1346 aa26.48■■□□□ 1.83
SSR1-204ENST00000474597 CPSF1Q10570 1443 aaKnown RBP26.48■■□□□ 1.83
SSR1-204ENST00000474597 GGNBP2Q9H3C7 697 aa26.48■■□□□ 1.83
SSR1-204ENST00000474597 AKAP12Q02952 1782 aa26.47■■□□□ 1.83
SSR1-204ENST00000474597 TOPAZ1Q8N9V7 1692 aa26.47■■□□□ 1.83
SSR1-204ENST00000474597 FYB1O15117 783 aa26.46■■□□□ 1.83
SSR1-204ENST00000474597 EDC4Q6P2E9 1401 aaKnown RBP26.46■■□□□ 1.83
SSR1-204ENST00000474597 NUTM2FA1L443 756 aa26.46■■□□□ 1.83
SSR1-204ENST00000474597 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.45■■□□□ 1.822e-7■□□□□ 10
SSR1-204ENST00000474597 MON2Q7Z3U7 1717 aa26.45■■□□□ 1.82
SSR1-204ENST00000474597 POLR3AO14802 1390 aaPredicted RBP26.44■■□□□ 1.82
SSR1-204ENST00000474597 ZNF692Q9BU19 519 aaPredicted RBP26.44■■□□□ 1.82
SSR1-204ENST00000474597 BLMP54132 1417 aaPredicted RBP26.43■■□□□ 1.82
SSR1-204ENST00000474597 ADAMTS8Q9UP79 889 aa26.42■■□□□ 1.82
SSR1-204ENST00000474597 CFAP53Q96M91 514 aa26.42■■□□□ 1.82
SSR1-204ENST00000474597 KDM4FA0A1W2PPD8 638 aa26.4■■□□□ 1.82
SSR1-204ENST00000474597 PLEKHG3A1L390 1219 aa26.39■■□□□ 1.82
SSR1-204ENST00000474597 MTHFSP49914 203 aa26.39■■□□□ 1.82
SSR1-204ENST00000474597 SENP3-EIF4A1A0A087X0R7 540 aa26.38■■□□□ 1.81
SSR1-204ENST00000474597 RGPD8O14715 1765 aaPredicted RBP26.38■■□□□ 1.81
SSR1-204ENST00000474597 ACEP12821 1306 aa26.37■■□□□ 1.81
SSR1-204ENST00000474597 NALCNQ8IZF0 1738 aa26.37■■□□□ 1.81
SSR1-204ENST00000474597 FMN2Q9NZ56 1722 aa26.37■■□□□ 1.81
SSR1-204ENST00000474597 ANKARQ7Z5J8 1434 aa26.36■■□□□ 1.81
SSR1-204ENST00000474597 NWD1Q149M9 1564 aa26.35■■□□□ 1.81
SSR1-204ENST00000474597 NKTRP30414 1462 aaKnown RBP26.34■■□□□ 1.81
SSR1-204ENST00000474597 SALL2Q9Y467 1007 aaPredicted RBP26.32■■□□□ 1.8
SSR1-204ENST00000474597 NME9Q86XW9 330 aa26.32■■□□□ 1.8
SSR1-204ENST00000474597 SHPRHQ149N8 1683 aa26.31■■□□□ 1.8
SSR1-204ENST00000474597 C14orf37Q86TY3 774 aa26.31■■□□□ 1.8
SSR1-204ENST00000474597 PMFBP1Q8TBY8 1022 aa26.31■■□□□ 1.8
SSR1-204ENST00000474597 NRKQ7Z2Y5 1582 aa26.3■■□□□ 1.8
SSR1-204ENST00000474597 USP6P35125 1406 aa26.3■■□□□ 1.8
SSR1-204ENST00000474597 ADGRL3Q9HAR2 1447 aa26.3■■□□□ 1.8
SSR1-204ENST00000474597 HSPA2P54652 639 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms