RNA–Protein interactions for RNA: ENST00000473550.1

DUBR-203, DPPA2 upstream binding RNA, humanhuman

TSL 3 BASIC

Gene DUBR, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-203ENST00000473550 TRAK1Q9UPV9 953 aa13.52□□□□□ -0.25
DUBR-203ENST00000473550 FAM135BQ49AJ0 1406 aa13.52□□□□□ -0.25
DUBR-203ENST00000473550 CPS1P31327 1500 aa13.51□□□□□ -0.25
DUBR-203ENST00000473550 LMTK3Q96Q04 1460 aa13.51□□□□□ -0.25
DUBR-203ENST00000473550 PUS7Q96PZ0 661 aaKnown RBP13.51□□□□□ -0.25
DUBR-203ENST00000473550 METP08581 1390 aa13.5□□□□□ -0.25
DUBR-203ENST00000473550 CCDC7Q96M83 1385 aa13.5□□□□□ -0.25
DUBR-203ENST00000473550 TESK2Q96S53 571 aa13.5□□□□□ -0.25
DUBR-203ENST00000473550 HIRIP3Q9BW71 556 aaPredicted RBP13.5□□□□□ -0.25
DUBR-203ENST00000473550 QRICH2Q9H0J4 1663 aa13.5□□□□□ -0.25
DUBR-203ENST00000473550 FKBP8Q14318 412 aa13.49□□□□□ -0.25
DUBR-203ENST00000473550 POGKQ9P215 609 aa13.49□□□□□ -0.25
DUBR-203ENST00000473550 PTCH1Q13635 1447 aa13.48□□□□□ -0.25
DUBR-203ENST00000473550 SLC26A8Q96RN1 970 aa13.48□□□□□ -0.25
DUBR-203ENST00000473550 KIF7Q2M1P5 1343 aa13.47□□□□□ -0.25
DUBR-203ENST00000473550 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
DUBR-203ENST00000473550 STK26Q9P289 416 aa13.47□□□□□ -0.25
DUBR-203ENST00000473550 EVC2Q86UK5 1308 aa13.46□□□□□ -0.25
DUBR-203ENST00000473550 POLA2Q14181 598 aa13.46□□□□□ -0.25
DUBR-203ENST00000473550 DIEXFQ68CQ4 756 aaKnown RBP13.46□□□□□ -0.25
DUBR-203ENST00000473550 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
DUBR-203ENST00000473550 XRN1Q8IZH2 1706 aaKnown RBP13.46□□□□□ -0.25
DUBR-203ENST00000473550 CHD2O14647 1828 aaKnown RBP13.46□□□□□ -0.26
DUBR-203ENST00000473550 NCKAP5LQ9HCH0 1330 aa13.45□□□□□ -0.26
DUBR-203ENST00000473550 PRAM1Q96QH2 718 aa13.45□□□□□ -0.26
DUBR-203ENST00000473550 AMOTL2Q9Y2J4 779 aa13.44□□□□□ -0.26
DUBR-203ENST00000473550 NWD1Q149M9 1564 aa13.43□□□□□ -0.26
DUBR-203ENST00000473550 PTPRUQ92729 1446 aa13.42□□□□□ -0.26
DUBR-203ENST00000473550 C11orf95C9JLR9 678 aaPredicted RBP13.42□□□□□ -0.26
DUBR-203ENST00000473550 KCNA6P17658 529 aa13.42□□□□□ -0.26
DUBR-203ENST00000473550 DISP3Q9P2K9 1392 aa13.42□□□□□ -0.26
DUBR-203ENST00000473550 NINLQ9Y2I6 1382 aa13.42□□□□□ -0.26
DUBR-203ENST00000473550 NKTRP30414 1462 aaKnown RBP13.42□□□□□ -0.26
DUBR-203ENST00000473550 ADGRB2O60241 1585 aa13.41□□□□□ -0.26
DUBR-203ENST00000473550 DDX10Q13206 875 aaKnown RBP13.41□□□□□ -0.26
DUBR-203ENST00000473550 ATAD2Q6PL18 1390 aa13.41□□□□□ -0.26
DUBR-203ENST00000473550 STRCQ7RTU9 1775 aa13.4□□□□□ -0.26
DUBR-203ENST00000473550 HSPA2P54652 639 aa13.4□□□□□ -0.26
DUBR-203ENST00000473550 ROBO2Q9HCK4 1378 aa13.4□□□□□ -0.26
DUBR-203ENST00000473550 NCOA3Q9Y6Q9 1424 aa13.39□□□□□ -0.27
DUBR-203ENST00000473550 TULP4Q9NRJ4 1543 aa13.39□□□□□ -0.27
DUBR-203ENST00000473550 POLR3GLQ9BT43 218 aa13.38□□□□□ -0.27
DUBR-203ENST00000473550 WAPLQ7Z5K2 1190 aa13.37□□□□□ -0.27
DUBR-203ENST00000473550 MINK1Q8N4C8 1332 aaPredicted RBP13.37□□□□□ -0.27
DUBR-203ENST00000473550 WASLO00401 505 aaPredicted RBP13.36□□□□□ -0.27
DUBR-203ENST00000473550 SRPK2P78362 688 aaKnown RBP13.36□□□□□ -0.27
DUBR-203ENST00000473550 SAFB2Q14151 953 aaKnown RBP eCLIP13.36□□□□□ -0.27
DUBR-203ENST00000473550 PLEKHH1Q9ULM0 1364 aa13.35□□□□□ -0.27
DUBR-203ENST00000473550 CDK19Q9BWU1 502 aa13.35□□□□□ -0.27
DUBR-203ENST00000473550 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.34□□□□□ -0.27
DUBR-203ENST00000473550 MYOM1P52179 1685 aa13.34□□□□□ -0.27
DUBR-203ENST00000473550 KTN1Q86UP2 1357 aaKnown RBP13.33□□□□□ -0.27
DUBR-203ENST00000473550 CDC42BPGQ6DT37 1551 aa13.33□□□□□ -0.28
DUBR-203ENST00000473550 ANP32CO43423 234 aa13.33□□□□□ -0.28
DUBR-203ENST00000473550 ANKARQ7Z5J8 1434 aa13.32□□□□□ -0.28
DUBR-203ENST00000473550 ADGRL3Q9HAR2 1447 aa13.32□□□□□ -0.28
DUBR-203ENST00000473550 PROSER2Q86WR7 435 aaPredicted RBP13.32□□□□□ -0.28
DUBR-203ENST00000473550 TERF2IPQ9NYB0 399 aa13.32□□□□□ -0.28
DUBR-203ENST00000473550 ITSN1Q15811 1721 aa13.31□□□□□ -0.28
DUBR-203ENST00000473550 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
DUBR-203ENST00000473550 CCDC61Q9Y6R9 512 aa13.31□□□□□ -0.28
DUBR-203ENST00000473550 ANKRD36BQ8N2N9 1353 aa13.31□□□□□ -0.28
DUBR-203ENST00000473550 DCCP43146 1447 aa13.3□□□□□ -0.28
DUBR-203ENST00000473550 ATP7BP35670 1465 aa13.3□□□□□ -0.28
DUBR-203ENST00000473550 DSG3P32926 999 aa13.3□□□□□ -0.28
DUBR-203ENST00000473550 PANK3Q9H999 370 aa13.3□□□□□ -0.28
DUBR-203ENST00000473550 CABP2Q9NPB3 220 aa13.3□□□□□ -0.28
DUBR-203ENST00000473550 NPC1L1Q9UHC9 1359 aa13.3□□□□□ -0.28
DUBR-203ENST00000473550 ABCB7O75027 752 aa13.29□□□□□ -0.28
DUBR-203ENST00000473550 HDGFL2Q7Z4V5 671 aaPredicted RBP13.29□□□□□ -0.28
DUBR-203ENST00000473550 TMC1Q8TDI8 760 aa13.29□□□□□ -0.28
DUBR-203ENST00000473550 NUDT16Q96DE0 195 aaKnown RBP13.29□□□□□ -0.28
DUBR-203ENST00000473550 KNSTRNQ9Y448 316 aa13.29□□□□□ -0.28
DUBR-203ENST00000473550 NALCNQ8IZF0 1738 aa13.29□□□□□ -0.28
DUBR-203ENST00000473550 FMN2Q9NZ56 1722 aa13.29□□□□□ -0.28
DUBR-203ENST00000473550 PER1O15534 1290 aaPredicted RBP13.28□□□□□ -0.28
DUBR-203ENST00000473550 ZNF692Q9BU19 519 aaPredicted RBP13.28□□□□□ -0.28
DUBR-203ENST00000473550 C19orf44Q9H6X5 657 aa13.28□□□□□ -0.28
DUBR-203ENST00000473550 USP32Q8NFA0 1604 aa13.28□□□□□ -0.28
DUBR-203ENST00000473550 MKRN4PQ13434 485 aaPredicted RBP13.27□□□□□ -0.29
DUBR-203ENST00000473550 C14orf37Q86TY3 774 aa13.27□□□□□ -0.29
DUBR-203ENST00000473550 TOPAZ1Q8N9V7 1692 aa13.27□□□□□ -0.29
DUBR-203ENST00000473550 PLEKHG3A1L390 1219 aa13.26□□□□□ -0.29
DUBR-203ENST00000473550 STRCP1A6NGW2 1772 aa13.26□□□□□ -0.29
DUBR-203ENST00000473550 RALBP1Q15311 655 aa13.26□□□□□ -0.29
DUBR-203ENST00000473550 PPIP5K1Q6PFW1 1433 aa13.26□□□□□ -0.29
DUBR-203ENST00000473550 SLC12A5Q9H2X9 1139 aa13.26□□□□□ -0.29
DUBR-203ENST00000473550 BRD4O60885 1362 aaPredicted RBP13.25□□□□□ -0.29
DUBR-203ENST00000473550 NSD2O96028 1365 aa13.25□□□□□ -0.29
DUBR-203ENST00000473550 MSH6P52701 1360 aa13.25□□□□□ -0.29
DUBR-203ENST00000473550 TMEM94Q12767 1356 aa13.25□□□□□ -0.29
DUBR-203ENST00000473550 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
DUBR-203ENST00000473550 CCER2I3L3R5 266 aa13.24□□□□□ -0.29
DUBR-203ENST00000473550 CADPS2Q86UW7 1296 aa13.24□□□□□ -0.29
DUBR-203ENST00000473550 CABP1Q9NZU7 370 aa13.24□□□□□ -0.29
DUBR-203ENST00000473550 LRRC7Q96NW7 1537 aa13.23□□□□□ -0.29
DUBR-203ENST00000473550 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
DUBR-203ENST00000473550 CGNL1Q0VF96 1302 aa13.23□□□□□ -0.29
DUBR-203ENST00000473550 ATF3P18847 181 aa13.23□□□□□ -0.29
DUBR-203ENST00000473550 PRKRIP1Q9H875 184 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms