RNA–Protein interactions for RNA: ENST00000471603.6

PKD1-207, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,505 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-207ENST00000471603 POLR3GLQ9BT43 218 aa18.21■□□□□ 0.51
PKD1-207ENST00000471603 ST20-MTHFSA0A0A6YYL1 179 aa18.21■□□□□ 0.51
PKD1-207ENST00000471603 RRP1P56182 461 aaKnown RBP18.2■□□□□ 0.5
PKD1-207ENST00000471603 MYOM2P54296 1465 aa18.19■□□□□ 0.5
PKD1-207ENST00000471603 NEURL4Q96JN8 1562 aa18.19■□□□□ 0.5
PKD1-207ENST00000471603 SENP3-EIF4A1A0A087X0R7 540 aa18.18■□□□□ 0.5
PKD1-207ENST00000471603 PIK3C2GO75747 1445 aa18.18■□□□□ 0.5
PKD1-207ENST00000471603 AAMPQ13685 434 aa18.17■□□□□ 0.5
PKD1-207ENST00000471603 UBR1Q8IWV7 1749 aa18.17■□□□□ 0.5
PKD1-207ENST00000471603 CALD1Q05682 793 aaKnown RBP18.17■□□□□ 0.5
PKD1-207ENST00000471603 RBM10P98175 930 aaKnown RBP18.16■□□□□ 0.5
PKD1-207ENST00000471603 EXOC6Q8TAG9 804 aa18.16■□□□□ 0.5
PKD1-207ENST00000471603 VGFO15240 615 aaPredicted RBP18.16■□□□□ 0.5
PKD1-207ENST00000471603 RIMS2Q9UQ26 1411 aa18.15■□□□□ 0.5
PKD1-207ENST00000471603 MYO3AQ8NEV4 1616 aa18.15■□□□□ 0.5
PKD1-207ENST00000471603 NRXN1Q9ULB1 1477 aa18.14■□□□□ 0.5
PKD1-207ENST00000471603 RPGRIP1LQ68CZ1 1315 aa18.14■□□□□ 0.49
PKD1-207ENST00000471603 TRAK1Q9UPV9 953 aa18.14■□□□□ 0.49
PKD1-207ENST00000471603 FGD1P98174 961 aa18.13■□□□□ 0.49
PKD1-207ENST00000471603 STK26Q9P289 416 aa18.13■□□□□ 0.49
PKD1-207ENST00000471603 PNISRQ8TF01 805 aaKnown RBP18.13■□□□□ 0.49
PKD1-207ENST00000471603 PDCL3Q9H2J4 239 aa18.13■□□□□ 0.49
PKD1-207ENST00000471603 PTPRMP28827 1452 aa18.13■□□□□ 0.49
PKD1-207ENST00000471603 GPRASP1Q5JY77 1395 aa18.13■□□□□ 0.49
PKD1-207ENST00000471603 LTKP29376 864 aa18.12■□□□□ 0.49
PKD1-207ENST00000471603 SLC4A3P48751 1232 aa18.11■□□□□ 0.49
PKD1-207ENST00000471603 CNGB1Q14028 1251 aaPredicted RBP18.11■□□□□ 0.49
PKD1-207ENST00000471603 SAFB2Q14151 953 aaKnown RBP eCLIP18.11■□□□□ 0.49
PKD1-207ENST00000471603 ZFYVE9O95405 1425 aa18.1■□□□□ 0.49
PKD1-207ENST00000471603 C14orf93Q9H972 538 aaKnown RBP18.1■□□□□ 0.49
PKD1-207ENST00000471603 TMEM2Q9UHN6 1383 aa18.1■□□□□ 0.49
PKD1-207ENST00000471603 NLRP1Q9C000 1473 aa18.1■□□□□ 0.49
PKD1-207ENST00000471603 PRDM4Q9UKN5 801 aa18.1■□□□□ 0.49
PKD1-207ENST00000471603 LRPPRCP42704 1394 aaKnown RBP18.09■□□□□ 0.49
PKD1-207ENST00000471603 KDM4FA0A1W2PPD8 638 aa18.09■□□□□ 0.49
PKD1-207ENST00000471603 RCAN3Q9UKA8 241 aa18.09■□□□□ 0.49
PKD1-207ENST00000471603 IQGAP1P46940 1657 aa18.08■□□□□ 0.49
PKD1-207ENST00000471603 TXNDC2Q86VQ3 553 aa18.08■□□□□ 0.48
PKD1-207ENST00000471603 STAC3Q96MF2 364 aa18.08■□□□□ 0.48
PKD1-207ENST00000471603 CEP170BQ9Y4F5 1589 aaPredicted RBP18.08■□□□□ 0.48
PKD1-207ENST00000471603 ASXL1Q8IXJ9 1541 aa18.07■□□□□ 0.48
PKD1-207ENST00000471603 TPM2P07951 284 aa18.07■□□□□ 0.48
PKD1-207ENST00000471603 ADGRB1O14514 1584 aa18.07■□□□□ 0.48
PKD1-207ENST00000471603 KIAA1210Q9ULL0 1709 aa18.07■□□□□ 0.48
PKD1-207ENST00000471603 SLC26A8Q96RN1 970 aa18.07■□□□□ 0.48
PKD1-207ENST00000471603 POGKQ9P215 609 aa18.07■□□□□ 0.48
PKD1-207ENST00000471603 SCAF11Q99590 1463 aaKnown RBP18.06■□□□□ 0.48
PKD1-207ENST00000471603 DISP3Q9P2K9 1392 aa18.05■□□□□ 0.48
PKD1-207ENST00000471603 TESK2Q96S53 571 aa18.05■□□□□ 0.48
PKD1-207ENST00000471603 ALKQ9UM73 1620 aa18.05■□□□□ 0.48
PKD1-207ENST00000471603 PDE3BQ13370 1112 aa18.05■□□□□ 0.48
PKD1-207ENST00000471603 LAMC1P11047 1609 aa18.05■□□□□ 0.48
PKD1-207ENST00000471603 NRXN3Q9Y4C0 1643 aa18.04■□□□□ 0.48
PKD1-207ENST00000471603 TMC1Q8TDI8 760 aa18.03■□□□□ 0.48
PKD1-207ENST00000471603 A0A0U1RQG5 324 aaPredicted RBP18.03■□□□□ 0.48
PKD1-207ENST00000471603 FAM161AQ3B820 660 aa18.03■□□□□ 0.48
PKD1-207ENST00000471603 SETD1BQ9UPS6 1966 aaKnown RBP18.03■□□□□ 0.48
PKD1-207ENST00000471603 METP08581 1390 aa18.02■□□□□ 0.48
PKD1-207ENST00000471603 FSD2A1L4K1 749 aa18.02■□□□□ 0.48
PKD1-207ENST00000471603 THEMISQ8N1K5 641 aaPredicted RBP18.02■□□□□ 0.48
PKD1-207ENST00000471603 KDM5AP29375 1690 aaKnown RBP18.01■□□□□ 0.47
PKD1-207ENST00000471603 XRCC6P12956 609 aaKnown RBP eCLIP18■□□□□ 0.47
PKD1-207ENST00000471603 EID1Q9Y6B2 187 aa18■□□□□ 0.47
PKD1-207ENST00000471603 BRD4O60885 1362 aaPredicted RBP18■□□□□ 0.47
PKD1-207ENST00000471603 KTN1Q86UP2 1357 aaKnown RBP18■□□□□ 0.47
PKD1-207ENST00000471603 SETBP1Q9Y6X0 1596 aa18■□□□□ 0.47
PKD1-207ENST00000471603 HSPA2P54652 639 aa18■□□□□ 0.47
PKD1-207ENST00000471603 ABCF1Q8NE71 845 aaKnown RBP eCLIP18■□□□□ 0.47
PKD1-207ENST00000471603 SETD1AO15047 1707 aaKnown RBP17.99■□□□□ 0.47
PKD1-207ENST00000471603 C8orf34Q49A92 452 aa17.99■□□□□ 0.47
PKD1-207ENST00000471603 SKAP1Q86WV1 359 aa17.98■□□□□ 0.47
PKD1-207ENST00000471603 GOLGA6L3A6NEY3 463 aa17.98■□□□□ 0.47
PKD1-207ENST00000471603 PDE4CQ08493 712 aa17.98■□□□□ 0.47
PKD1-207ENST00000471603 ARHGEF28Q8N1W1 1705 aaKnown RBP17.97■□□□□ 0.47
PKD1-207ENST00000471603 YTHDC2Q9H6S0 1430 aaKnown RBP17.97■□□□□ 0.47
PKD1-207ENST00000471603 WAPLQ7Z5K2 1190 aa17.97■□□□□ 0.47
PKD1-207ENST00000471603 PRAM1Q96QH2 718 aa17.97■□□□□ 0.47
PKD1-207ENST00000471603 EIF3AQ14152 1382 aaKnown RBP17.97■□□□□ 0.47
PKD1-207ENST00000471603 KDM2BQ8NHM5 1336 aa17.96■□□□□ 0.47
PKD1-207ENST00000471603 ADAMTS13Q76LX8 1427 aa17.96■□□□□ 0.47
PKD1-207ENST00000471603 SLIT1O75093 1534 aa17.96■□□□□ 0.47
PKD1-207ENST00000471603 ZNF142P52746 1687 aaPredicted RBP17.96■□□□□ 0.47
PKD1-207ENST00000471603 ARHGAP23Q9P227 1491 aa17.96■□□□□ 0.47
PKD1-207ENST00000471603 QRICH2Q9H0J4 1663 aa17.95■□□□□ 0.46
PKD1-207ENST00000471603 HDGFP51858 240 aaKnown RBP17.95■□□□□ 0.46
PKD1-207ENST00000471603 MINK1Q8N4C8 1332 aaPredicted RBP17.95■□□□□ 0.46
PKD1-207ENST00000471603 PLEKHH1Q9ULM0 1364 aa17.95■□□□□ 0.46
PKD1-207ENST00000471603 TMF1P82094 1093 aa17.94■□□□□ 0.46
PKD1-207ENST00000471603 NCKAP5LQ9HCH0 1330 aa17.93■□□□□ 0.46
PKD1-207ENST00000471603 PLEKHG1Q9ULL1 1385 aa17.93■□□□□ 0.46
PKD1-207ENST00000471603 ESPNB1AK53 854 aa17.93■□□□□ 0.46
PKD1-207ENST00000471603 CENPQQ7L2Z9 268 aaPredicted RBP17.92■□□□□ 0.46
PKD1-207ENST00000471603 MYBBP1AQ9BQG0 1328 aaKnown RBP17.92■□□□□ 0.46
PKD1-207ENST00000471603 RBM33Q96EV2 1170 aaKnown RBP17.92■□□□□ 0.46
PKD1-207ENST00000471603 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
PKD1-207ENST00000471603 ANKLE2Q86XL3 938 aa17.91■□□□□ 0.46
PKD1-207ENST00000471603 RALBP1Q15311 655 aa17.91■□□□□ 0.46
PKD1-207ENST00000471603 MAP7D2Q96T17 732 aa17.91■□□□□ 0.46
PKD1-207ENST00000471603 MRE11P49959 708 aa17.9■□□□□ 0.46
PKD1-207ENST00000471603 ISY1Q9ULR0 285 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms