RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 THEMISQ8N1K5 641 aaPredicted RBP16.77■□□□□ 0.28
HDLBP-231ENST00000467435 PUS7Q96PZ0 661 aaKnown RBP16.76■□□□□ 0.27
HDLBP-231ENST00000467435 KNSTRNQ9Y448 316 aa16.75■□□□□ 0.27
HDLBP-231ENST00000467435 FAM135BQ49AJ0 1406 aa16.75■□□□□ 0.27
HDLBP-231ENST00000467435 PLEKHH1Q9ULM0 1364 aa16.75■□□□□ 0.27
HDLBP-231ENST00000467435 MINK1Q8N4C8 1332 aaPredicted RBP16.74■□□□□ 0.27
HDLBP-231ENST00000467435 XRN1Q8IZH2 1706 aaKnown RBP16.74■□□□□ 0.27
HDLBP-231ENST00000467435 CC2D1BQ5T0F9 858 aaKnown RBP16.74■□□□□ 0.27
HDLBP-231ENST00000467435 BRD4O60885 1362 aaPredicted RBP16.74■□□□□ 0.27
HDLBP-231ENST00000467435 ADGRB2O60241 1585 aa16.73■□□□□ 0.27
HDLBP-231ENST00000467435 ATAD2Q6PL18 1390 aa16.73■□□□□ 0.27
HDLBP-231ENST00000467435 NPC1L1Q9UHC9 1359 aa16.73■□□□□ 0.27
HDLBP-231ENST00000467435 NINLQ9Y2I6 1382 aa16.73■□□□□ 0.27
HDLBP-231ENST00000467435 NSD3Q9BZ95 1437 aa16.71■□□□□ 0.27
HDLBP-231ENST00000467435 TMC1Q8TDI8 760 aa16.71■□□□□ 0.27
HDLBP-231ENST00000467435 CABP2Q9NPB3 220 aa16.71■□□□□ 0.27
HDLBP-231ENST00000467435 ANKRD26Q9UPS8 1709 aa16.7■□□□□ 0.26
HDLBP-231ENST00000467435 ANKRD36BQ8N2N9 1353 aa16.7■□□□□ 0.26
HDLBP-231ENST00000467435 SRPK2P78362 688 aaKnown RBP16.7■□□□□ 0.26
HDLBP-231ENST00000467435 AMER1Q5JTC6 1135 aaPredicted RBP16.7■□□□□ 0.26
HDLBP-231ENST00000467435 KIF20BQ96Q89 1820 aa16.7■□□□□ 0.26
HDLBP-231ENST00000467435 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.7■□□□□ 0.26
HDLBP-231ENST00000467435 PTPRUQ92729 1446 aa16.7■□□□□ 0.26
HDLBP-231ENST00000467435 WAPLQ7Z5K2 1190 aa16.69■□□□□ 0.26
HDLBP-231ENST00000467435 NLRP13Q86W25 1043 aa16.69■□□□□ 0.26
HDLBP-231ENST00000467435 SIRT1Q96EB6 747 aa16.69■□□□□ 0.26
HDLBP-231ENST00000467435 ITSN1Q15811 1721 aa16.68■□□□□ 0.26
HDLBP-231ENST00000467435 FAM9BQ8IZU0 186 aa16.68■□□□□ 0.26
HDLBP-231ENST00000467435 SLC12A5Q9H2X9 1139 aa16.68■□□□□ 0.26
HDLBP-231ENST00000467435 PTCH1Q13635 1447 aa16.68■□□□□ 0.26
HDLBP-231ENST00000467435 ROBO2Q9HCK4 1378 aa16.67■□□□□ 0.26
HDLBP-231ENST00000467435 TOPAZ1Q8N9V7 1692 aa16.67■□□□□ 0.26
HDLBP-231ENST00000467435 SLC26A8Q96RN1 970 aa16.67■□□□□ 0.26
HDLBP-231ENST00000467435 CARD14Q9BXL6 1004 aa16.67■□□□□ 0.26
HDLBP-231ENST00000467435 CHD2O14647 1828 aaKnown RBP16.66■□□□□ 0.26
HDLBP-231ENST00000467435 CDK19Q9BWU1 502 aa16.66■□□□□ 0.26
HDLBP-231ENST00000467435 TBX22Q9Y458 520 aa16.66■□□□□ 0.26
HDLBP-231ENST00000467435 AKAP12Q02952 1782 aa16.65■□□□□ 0.26
HDLBP-231ENST00000467435 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
HDLBP-231ENST00000467435 ATP7BP35670 1465 aa16.65■□□□□ 0.26
HDLBP-231ENST00000467435 CD163L1Q9NR16 1453 aa16.65■□□□□ 0.26
HDLBP-231ENST00000467435 A0A1W2PP64 1363 aa16.64■□□□□ 0.26
HDLBP-231ENST00000467435 MON2Q7Z3U7 1717 aa16.64■□□□□ 0.25
HDLBP-231ENST00000467435 PIK3R4Q99570 1358 aa16.64■□□□□ 0.25
HDLBP-231ENST00000467435 CDC42BPGQ6DT37 1551 aa16.63■□□□□ 0.25
HDLBP-231ENST00000467435 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
HDLBP-231ENST00000467435 NSD2O96028 1365 aa16.62■□□□□ 0.25
HDLBP-231ENST00000467435 WASLO00401 505 aaPredicted RBP16.61■□□□□ 0.25
HDLBP-231ENST00000467435 PPP2R1AP30153 589 aa16.61■□□□□ 0.25
HDLBP-231ENST00000467435 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
HDLBP-231ENST00000467435 NPHP4O75161 1426 aaPredicted RBP16.6■□□□□ 0.25
HDLBP-231ENST00000467435 PPIP5K1Q6PFW1 1433 aa16.6■□□□□ 0.25
HDLBP-231ENST00000467435 NALCNQ8IZF0 1738 aa16.59■□□□□ 0.25
HDLBP-231ENST00000467435 TERF2IPQ9NYB0 399 aa16.59■□□□□ 0.25
HDLBP-231ENST00000467435 AMOTL2Q9Y2J4 779 aa16.59■□□□□ 0.25
HDLBP-231ENST00000467435 CGNL1Q0VF96 1302 aa16.59■□□□□ 0.25
HDLBP-231ENST00000467435 NWD1Q149M9 1564 aa16.58■□□□□ 0.24
HDLBP-231ENST00000467435 FMN2Q9NZ56 1722 aa16.58■□□□□ 0.24
HDLBP-231ENST00000467435 NRKQ7Z2Y5 1582 aa16.57■□□□□ 0.24
HDLBP-231ENST00000467435 HDGFL2Q7Z4V5 671 aaPredicted RBP16.57■□□□□ 0.24
HDLBP-231ENST00000467435 RGPD8O14715 1765 aaPredicted RBP16.56■□□□□ 0.24
HDLBP-231ENST00000467435 SHPRHQ149N8 1683 aa16.56■□□□□ 0.24
HDLBP-231ENST00000467435 ZBED9Q6R2W3 1325 aa16.55■□□□□ 0.24
HDLBP-231ENST00000467435 CABP1Q9NZU7 370 aa16.55■□□□□ 0.24
HDLBP-231ENST00000467435 BLMP54132 1417 aaPredicted RBP16.54■□□□□ 0.24
HDLBP-231ENST00000467435 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
HDLBP-231ENST00000467435 MORC1Q86VD1 984 aa16.54■□□□□ 0.24
HDLBP-231ENST00000467435 CPSF1Q10570 1443 aaKnown RBP16.53■□□□□ 0.24
HDLBP-231ENST00000467435 INSRP06213 1382 aa16.53■□□□□ 0.24
HDLBP-231ENST00000467435 NUDT16Q96DE0 195 aaKnown RBP16.53■□□□□ 0.24
HDLBP-231ENST00000467435 PRR36Q9H6K5 1346 aa16.52■□□□□ 0.24
HDLBP-231ENST00000467435 KCNA6P17658 529 aa16.52■□□□□ 0.24
HDLBP-231ENST00000467435 NKTRP30414 1462 aaKnown RBP16.52■□□□□ 0.23
HDLBP-231ENST00000467435 EDC4Q6P2E9 1401 aaKnown RBP16.52■□□□□ 0.23
HDLBP-231ENST00000467435 GTF3C3Q9Y5Q9 886 aa16.51■□□□□ 0.23
HDLBP-231ENST00000467435 CCDC61Q9Y6R9 512 aa16.5■□□□□ 0.23
HDLBP-231ENST00000467435 POLR3AO14802 1390 aaPredicted RBP16.5■□□□□ 0.23
HDLBP-231ENST00000467435 NCKAP5LQ9HCH0 1330 aa16.49■□□□□ 0.23
HDLBP-231ENST00000467435 WDR43Q15061 677 aaKnown RBP eCLIP16.48■□□□□ 0.23
HDLBP-231ENST00000467435 ANKARQ7Z5J8 1434 aa16.47■□□□□ 0.23
HDLBP-231ENST00000467435 TNNT2P45379 298 aaPredicted RBP16.47■□□□□ 0.23
HDLBP-231ENST00000467435 GGNBP2Q9H3C7 697 aa16.47■□□□□ 0.23
HDLBP-231ENST00000467435 ADGRL3Q9HAR2 1447 aa16.45■□□□□ 0.22
HDLBP-231ENST00000467435 KDM4FA0A1W2PPD8 638 aa16.45■□□□□ 0.22
HDLBP-231ENST00000467435 FYB1O15117 783 aa16.45■□□□□ 0.22
HDLBP-231ENST00000467435 LMTK3Q96Q04 1460 aa16.45■□□□□ 0.22
HDLBP-231ENST00000467435 STRCP1A6NGW2 1772 aa16.44■□□□□ 0.22
HDLBP-231ENST00000467435 MAP2P11137 1827 aaKnown RBP16.44■□□□□ 0.22
HDLBP-231ENST00000467435 NUTM2FA1L443 756 aa16.43■□□□□ 0.22
HDLBP-231ENST00000467435 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
HDLBP-231ENST00000467435 STRCQ7RTU9 1775 aa16.43■□□□□ 0.22
HDLBP-231ENST00000467435 USP6P35125 1406 aa16.43■□□□□ 0.22
HDLBP-231ENST00000467435 COL3A1P02461 1466 aaPredicted RBP16.42■□□□□ 0.22
HDLBP-231ENST00000467435 PLEKHG3A1L390 1219 aa16.42■□□□□ 0.22
HDLBP-231ENST00000467435 ZNF692Q9BU19 519 aaPredicted RBP16.42■□□□□ 0.22
HDLBP-231ENST00000467435 ADAMTS8Q9UP79 889 aa16.42■□□□□ 0.22
HDLBP-231ENST00000467435 ACEP12821 1306 aa16.42■□□□□ 0.22
HDLBP-231ENST00000467435 CFAP53Q96M91 514 aa16.41■□□□□ 0.22
HDLBP-231ENST00000467435 SENP3-EIF4A1A0A087X0R7 540 aa16.4■□□□□ 0.22
HDLBP-231ENST00000467435 MTHFSP49914 203 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms