RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 PCMTD1Q96MG8 357 aaPredicted RBP9.84□□□□□ -0.83
SPTBN1-204ENST00000467371 ATAD2BQ9ULI0 1458 aa9.84□□□□□ -0.83
SPTBN1-204ENST00000467371 LNPKQ9C0E8 428 aa9.84□□□□□ -0.83
SPTBN1-204ENST00000467371 TMA7Q9Y2S6 64 aaKnown RBP9.84□□□□□ -0.83
SPTBN1-204ENST00000467371 GOLGA3Q08378 1498 aa9.84□□□□□ -0.83
SPTBN1-204ENST00000467371 RAPGEF2Q9Y4G8 1499 aa9.84□□□□□ -0.83
SPTBN1-204ENST00000467371 CFAP69A5D8W1 941 aa9.84□□□□□ -0.83
SPTBN1-204ENST00000467371 QTRT2Q9H974 415 aaKnown RBP9.84□□□□□ -0.83
SPTBN1-204ENST00000467371 NUB1Q9Y5A7 615 aa9.84□□□□□ -0.83
SPTBN1-204ENST00000467371 ZNF280DQ6N043 979 aa9.83□□□□□ -0.84
SPTBN1-204ENST00000467371 AMOTL1Q8IY63 956 aa9.83□□□□□ -0.84
SPTBN1-204ENST00000467371 hCG_2014768A0A024R1R8 64 aa9.83□□□□□ -0.84
SPTBN1-204ENST00000467371 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.83□□□□□ -0.84
SPTBN1-204ENST00000467371 AMHR2Q16671 573 aa9.83□□□□□ -0.84
SPTBN1-204ENST00000467371 ZNF500O60304 480 aaPredicted RBP9.82□□□□□ -0.84
SPTBN1-204ENST00000467371 AXDND1Q5T1B0 1012 aaPredicted RBP9.82□□□□□ -0.84
SPTBN1-204ENST00000467371 RPGRIP1LQ68CZ1 1315 aa9.82□□□□□ -0.84
SPTBN1-204ENST00000467371 TMEM88BA6NKF7 163 aa9.82□□□□□ -0.84
SPTBN1-204ENST00000467371 NRBP1Q9UHY1 535 aa9.82□□□□□ -0.84
SPTBN1-204ENST00000467371 TBX22Q9Y458 520 aa9.82□□□□□ -0.84
SPTBN1-204ENST00000467371 ANP32CO43423 234 aa9.82□□□□□ -0.84
SPTBN1-204ENST00000467371 CSB-PGBD3P0DP91 1061 aa9.82□□□□□ -0.84
SPTBN1-204ENST00000467371 DHX57Q6P158 1386 aaKnown RBP9.81□□□□□ -0.84
SPTBN1-204ENST00000467371 NLGN1Q8N2Q7 840 aa9.81□□□□□ -0.84
SPTBN1-204ENST00000467371 RECKO95980 971 aa9.81□□□□□ -0.84
SPTBN1-204ENST00000467371 CSPP1Q1MSJ5 1256 aa9.81□□□□□ -0.84
SPTBN1-204ENST00000467371 HSP90AB2PQ58FF8 381 aa9.81□□□□□ -0.84
SPTBN1-204ENST00000467371 BCL2L13Q9BXK5 485 aa9.81□□□□□ -0.84
SPTBN1-204ENST00000467371 SOX12O15370 315 aa9.81□□□□□ -0.84
SPTBN1-204ENST00000467371 SDE2Q6IQ49 451 aa9.81□□□□□ -0.84
SPTBN1-204ENST00000467371 HELBQ8NG08 1087 aaPredicted RBP9.81□□□□□ -0.84
SPTBN1-204ENST00000467371 SYNJ1O43426 1573 aa9.8□□□□□ -0.84
SPTBN1-204ENST00000467371 CUEDC1Q9NWM3 386 aaPredicted RBP9.8□□□□□ -0.84
SPTBN1-204ENST00000467371 STAG3Q9UJ98 1225 aa9.8□□□□□ -0.84
SPTBN1-204ENST00000467371 VRTNQ9H8Y1 702 aa9.8□□□□□ -0.84
SPTBN1-204ENST00000467371 EVA1CP58658 441 aa9.79□□□□□ -0.84
SPTBN1-204ENST00000467371 SGIP1Q9BQI5 828 aa9.79□□□□□ -0.84
SPTBN1-204ENST00000467371 SCYL1Q96KG9 808 aa9.79□□□□□ -0.84
SPTBN1-204ENST00000467371 GPR37O15354 613 aa9.79□□□□□ -0.84
SPTBN1-204ENST00000467371 BRINP2Q9C0B6 783 aa9.79□□□□□ -0.84
SPTBN1-204ENST00000467371 OXER1Q8TDS5 423 aa9.78□□□□□ -0.84
SPTBN1-204ENST00000467371 GIPC2Q8TF65 315 aa9.78□□□□□ -0.84
SPTBN1-204ENST00000467371 NRDCO43847 1150 aa9.78□□□□□ -0.84
SPTBN1-204ENST00000467371 CEP120Q8N960 986 aa9.78□□□□□ -0.84
SPTBN1-204ENST00000467371 CALR3Q96L12 384 aaKnown RBP9.78□□□□□ -0.84
SPTBN1-204ENST00000467371 FBXO9Q9UK97 447 aaPredicted RBP9.78□□□□□ -0.84
SPTBN1-204ENST00000467371 C7P10643 843 aa9.77□□□□□ -0.84
SPTBN1-204ENST00000467371 IPO9Q96P70 1041 aaKnown RBP9.77□□□□□ -0.84
SPTBN1-204ENST00000467371 POLD1P28340 1107 aa9.77□□□□□ -0.85
SPTBN1-204ENST00000467371 GET4Q7L5D6 327 aaPredicted RBP9.77□□□□□ -0.85
SPTBN1-204ENST00000467371 GLMNQ92990 594 aa9.77□□□□□ -0.85
SPTBN1-204ENST00000467371 SETDB1Q15047 1291 aa9.77□□□□□ -0.85
SPTBN1-204ENST00000467371 WDHD1O75717 1129 aaPredicted RBP9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 COPB2P35606 906 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 ZKSCAN2Q63HK3 967 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 DDX46Q7L014 1031 aaKnown RBP9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 PPP4R2Q9NY27 417 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 ARMCX6Q7L4S7 300 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 CCDC146Q8IYE0 955 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 SWAP70Q9UH65 585 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 GOLGA6CA6NDK9 693 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 GOLGA6BA6NDN3 693 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 SPDYE2BA6NHP3 402 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 SPDYE5A6NIY4 337 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 ZRANB2O95218 330 aaKnown RBP eCLIP9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 GOLGA6DP0CG33 693 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 SPDYE6P0CI01 402 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 SPDYE2Q495Y8 402 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 CCDC184Q52MB2 194 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 GOLGA6AQ9NYA3 693 aa9.76□□□□□ -0.85
SPTBN1-204ENST00000467371 ERBB3P21860 1342 aa9.75□□□□□ -0.85
SPTBN1-204ENST00000467371 CEP164Q9UPV0 1460 aa9.75□□□□□ -0.85
SPTBN1-204ENST00000467371 CNGB1Q14028 1251 aaPredicted RBP9.75□□□□□ -0.85
SPTBN1-204ENST00000467371 CFAP70Q5T0N1 1121 aa9.75□□□□□ -0.85
SPTBN1-204ENST00000467371 OTUD6BQ8N6M0 293 aa9.75□□□□□ -0.85
SPTBN1-204ENST00000467371 PEG3Q9GZU2 1588 aa9.75□□□□□ -0.85
SPTBN1-204ENST00000467371 BSDC1Q9NW68 430 aaPredicted RBP9.74□□□□□ -0.85
SPTBN1-204ENST00000467371 TBX4P57082 545 aa9.74□□□□□ -0.85
SPTBN1-204ENST00000467371 PLEKHG6Q3KR16 790 aa9.74□□□□□ -0.85
SPTBN1-204ENST00000467371 EEA1Q15075 1411 aa9.74□□□□□ -0.85
SPTBN1-204ENST00000467371 DHX16O60231 1041 aaKnown RBP9.74□□□□□ -0.85
SPTBN1-204ENST00000467371 TCEAL1Q15170 157 aa9.74□□□□□ -0.85
SPTBN1-204ENST00000467371 POM121CA8CG34 1229 aa9.73□□□□□ -0.85
SPTBN1-204ENST00000467371 GOLIM4O00461 696 aa9.73□□□□□ -0.85
SPTBN1-204ENST00000467371 SCP2P22307 547 aa9.73□□□□□ -0.85
SPTBN1-204ENST00000467371 MLLT3P42568 568 aaPredicted RBP9.73□□□□□ -0.85
SPTBN1-204ENST00000467371 PCGF5Q86SE9 256 aa9.73□□□□□ -0.85
SPTBN1-204ENST00000467371 RPUSD2Q8IZ73 545 aaKnown RBP9.73□□□□□ -0.85
SPTBN1-204ENST00000467371 PSEN1P49768 467 aa9.72□□□□□ -0.85
SPTBN1-204ENST00000467371 SH3D19Q5HYK7 790 aa9.72□□□□□ -0.85
SPTBN1-204ENST00000467371 IRF2BPLQ9H1B7 796 aa9.72□□□□□ -0.85
SPTBN1-204ENST00000467371 PIF1Q9H611 641 aa9.72□□□□□ -0.85
SPTBN1-204ENST00000467371 HDAC5Q9UQL6 1122 aa9.72□□□□□ -0.85
SPTBN1-204ENST00000467371 STK10O94804 968 aaKnown RBP9.72□□□□□ -0.85
SPTBN1-204ENST00000467371 XPCQ01831 940 aaPredicted RBP9.72□□□□□ -0.85
SPTBN1-204ENST00000467371 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.72□□□□□ -0.85
SPTBN1-204ENST00000467371 CCDC189A1A4V9 331 aa9.72□□□□□ -0.85
SPTBN1-204ENST00000467371 CCDC144BQ3MJ40 725 aa9.72□□□□□ -0.85
SPTBN1-204ENST00000467371 FRMD4BQ9Y2L6 1034 aa9.72□□□□□ -0.85
SPTBN1-204ENST00000467371 EGFL6Q8IUX8 553 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms