RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 CLK2P49760 499 aaKnown RBP13.15□□□□□ -0.3
LSG1-206ENST00000466391 RSBN1LQ6PCB5 846 aaPredicted RBP13.15□□□□□ -0.3
LSG1-206ENST00000466391 GOPCQ9HD26 462 aa13.14□□□□□ -0.31
LSG1-206ENST00000466391 LIMD1Q9UGP4 676 aa13.14□□□□□ -0.31
LSG1-206ENST00000466391 BAZ1BQ9UIG0 1483 aaKnown RBP13.14□□□□□ -0.31
LSG1-206ENST00000466391 SPTLC1O15269 473 aa13.13□□□□□ -0.31
LSG1-206ENST00000466391 FDX1P10109 184 aa13.13□□□□□ -0.31
LSG1-206ENST00000466391 MORN1Q5T089 497 aa13.13□□□□□ -0.31
LSG1-206ENST00000466391 BLOC1S3Q6QNY0 202 aa13.13□□□□□ -0.31
LSG1-206ENST00000466391 PROCA1Q8NCQ7 364 aaPredicted RBP13.13□□□□□ -0.31
LSG1-206ENST00000466391 PCMTD1Q96MG8 357 aaPredicted RBP13.13□□□□□ -0.31
LSG1-206ENST00000466391 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
LSG1-206ENST00000466391 COPS2P61201 443 aa13.12□□□□□ -0.31
LSG1-206ENST00000466391 CSPP1Q1MSJ5 1256 aa13.12□□□□□ -0.31
LSG1-206ENST00000466391 EEA1Q15075 1411 aa13.12□□□□□ -0.31
LSG1-206ENST00000466391 SLC27A5Q9Y2P5 690 aa13.11□□□□□ -0.31
LSG1-206ENST00000466391 PCDHGC3Q9UN70 934 aa13.1□□□□□ -0.31
LSG1-206ENST00000466391 PCDHB15Q9Y5E8 787 aa13.1□□□□□ -0.31
LSG1-206ENST00000466391 ABCC8Q09428 1581 aa13.1□□□□□ -0.31
LSG1-206ENST00000466391 GJA5P36382 358 aa13.09□□□□□ -0.31
LSG1-206ENST00000466391 NR1I2O75469 434 aa13.08□□□□□ -0.32
LSG1-206ENST00000466391 SCUBE3Q8IX30 993 aa13.08□□□□□ -0.32
LSG1-206ENST00000466391 MTRQ99707 1265 aa13.08□□□□□ -0.32
LSG1-206ENST00000466391 NCAPD3P42695 1498 aa13.08□□□□□ -0.32
LSG1-206ENST00000466391 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.05□□□□□ -0.32
LSG1-206ENST00000466391 C6orf229H3BNL8 230 aa13.04□□□□□ -0.32
LSG1-206ENST00000466391 QPCTQ16769 361 aa13.04□□□□□ -0.32
LSG1-206ENST00000466391 TUSC1Q2TAM9 212 aa13.04□□□□□ -0.32
LSG1-206ENST00000466391 TJAP1Q5JTD0 557 aa13.04□□□□□ -0.32
LSG1-206ENST00000466391 SYMPKQ92797 1274 aaKnown RBP13.04□□□□□ -0.32
LSG1-206ENST00000466391 Q3C1V9 767 aa13.03□□□□□ -0.32
LSG1-206ENST00000466391 CABLES1Q8TDN4 633 aa13.03□□□□□ -0.32
LSG1-206ENST00000466391 ZNF516Q92618 1163 aa13.03□□□□□ -0.32
LSG1-206ENST00000466391 IL21Q9HBE4 155 aa13.03□□□□□ -0.32
LSG1-206ENST00000466391 WRNQ14191 1432 aaPredicted RBP eCLIP13.03□□□□□ -0.32
LSG1-206ENST00000466391 NUTM2BA6NNL0 878 aaPredicted RBP13.02□□□□□ -0.33
LSG1-206ENST00000466391 NUTM2EB1AL46 878 aaPredicted RBP13.02□□□□□ -0.33
LSG1-206ENST00000466391 HRCP23327 699 aa13.02□□□□□ -0.33
LSG1-206ENST00000466391 NUTM2DQ5VT03 806 aaPredicted RBP13.02□□□□□ -0.33
LSG1-206ENST00000466391 RNF19BQ6ZMZ0 732 aa13.02□□□□□ -0.33
LSG1-206ENST00000466391 NUTM2AQ8IVF1 878 aaPredicted RBP13.02□□□□□ -0.33
LSG1-206ENST00000466391 ZBTB3Q9H5J0 574 aa13.02□□□□□ -0.33
LSG1-206ENST00000466391 LILRB3O75022 631 aa13.01□□□□□ -0.33
LSG1-206ENST00000466391 ZPR1O75312 459 aa13.01□□□□□ -0.33
LSG1-206ENST00000466391 MTMR2Q13614 643 aa13.01□□□□□ -0.33
LSG1-206ENST00000466391 FMNL1O95466 1100 aaPredicted RBP13□□□□□ -0.33
LSG1-206ENST00000466391 PRPF38BQ5VTL8 546 aaKnown RBP13□□□□□ -0.33
LSG1-206ENST00000466391 BRICD5Q6PL45 260 aa13□□□□□ -0.33
LSG1-206ENST00000466391 TLL1O43897 1013 aa12.99□□□□□ -0.33
LSG1-206ENST00000466391 TRIM26Q12899 539 aaPredicted RBP12.99□□□□□ -0.33
LSG1-206ENST00000466391 FBXO31Q5XUX0 539 aaPredicted RBP12.99□□□□□ -0.33
LSG1-206ENST00000466391 RTL5Q5HYW3 569 aaPredicted RBP12.98□□□□□ -0.33
LSG1-206ENST00000466391 FAM9AQ8IZU1 332 aaPredicted RBP12.98□□□□□ -0.33
LSG1-206ENST00000466391 THAP11Q96EK4 314 aa12.98□□□□□ -0.33
LSG1-206ENST00000466391 PCGF6Q9BYE7 350 aa12.98□□□□□ -0.33
LSG1-206ENST00000466391 SALL2Q9Y467 1007 aaPredicted RBP12.98□□□□□ -0.33
LSG1-206ENST00000466391 SPSB2Q99619 263 aa12.97□□□□□ -0.33
LSG1-206ENST00000466391 SYNJ1O43426 1573 aa12.96□□□□□ -0.33
LSG1-206ENST00000466391 KCNC4Q03721 635 aa12.96□□□□□ -0.33
LSG1-206ENST00000466391 SPDYE5A6NIY4 337 aa12.95□□□□□ -0.34
LSG1-206ENST00000466391 PPP2R2DQ66LE6 453 aa12.95□□□□□ -0.34
LSG1-206ENST00000466391 RETREG3Q86VR2 466 aa12.95□□□□□ -0.34
LSG1-206ENST00000466391 USB1Q9BQ65 265 aaKnown RBP12.95□□□□□ -0.34
LSG1-206ENST00000466391 PLSCR2Q9NRY7 297 aa12.95□□□□□ -0.34
LSG1-206ENST00000466391 ITGBL1O95965 494 aaPredicted RBP12.94□□□□□ -0.34
LSG1-206ENST00000466391 RFC5P40937 340 aa12.94□□□□□ -0.34
LSG1-206ENST00000466391 NKX2-3Q8TAU0 364 aa12.94□□□□□ -0.34
LSG1-206ENST00000466391 TOP2BQ02880 1626 aa12.93□□□□□ -0.34
LSG1-206ENST00000466391 BIVM-ERCC5R4GMW8 1640 aa12.93□□□□□ -0.34
LSG1-206ENST00000466391 ADH1BP00325 375 aa12.93□□□□□ -0.34
LSG1-206ENST00000466391 PRR7Q8TB68 274 aa12.93□□□□□ -0.34
LSG1-206ENST00000466391 TSC1Q92574 1164 aa12.93□□□□□ -0.34
LSG1-206ENST00000466391 SOGA1O94964 1423 aa12.93□□□□□ -0.34
LSG1-206ENST00000466391 TNIKQ9UKE5 1360 aa12.93□□□□□ -0.34
LSG1-206ENST00000466391 CFAP99D6REC4 459 aa12.92□□□□□ -0.34
LSG1-206ENST00000466391 KIF21BO75037 1637 aa12.91□□□□□ -0.34
LSG1-206ENST00000466391 FAM160A2Q8N612 972 aaPredicted RBP12.91□□□□□ -0.34
LSG1-206ENST00000466391 GTF3C3Q9Y5Q9 886 aa12.91□□□□□ -0.34
LSG1-206ENST00000466391 PRDM2Q13029 1718 aa12.9□□□□□ -0.34
LSG1-206ENST00000466391 GOLGA3Q08378 1498 aa12.89□□□□□ -0.35
LSG1-206ENST00000466391 AP1G2O75843 785 aa12.88□□□□□ -0.35
LSG1-206ENST00000466391 PRDM9Q9NQV7 894 aa12.88□□□□□ -0.35
LSG1-206ENST00000466391 CFTRP13569 1480 aa12.87□□□□□ -0.35
LSG1-206ENST00000466391 MSS51Q4VC12 460 aa12.87□□□□□ -0.35
LSG1-206ENST00000466391 SLC6A16Q9GZN6 736 aa12.87□□□□□ -0.35
LSG1-206ENST00000466391 TMEM259Q4ZIN3 620 aa12.86□□□□□ -0.35
LSG1-206ENST00000466391 HELBQ8NG08 1087 aaPredicted RBP12.86□□□□□ -0.35
LSG1-206ENST00000466391 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
LSG1-206ENST00000466391 RUSC2Q8N2Y8 1516 aa12.85□□□□□ -0.35
LSG1-206ENST00000466391 S1PR4O95977 384 aa12.84□□□□□ -0.35
LSG1-206ENST00000466391 CTDSPL2Q05D32 466 aa12.84□□□□□ -0.35
LSG1-206ENST00000466391 PLA2G2EQ9NZK7 142 aa12.84□□□□□ -0.35
LSG1-206ENST00000466391 CEP162Q5TB80 1403 aa12.84□□□□□ -0.35
LSG1-206ENST00000466391 JUNDP17535 347 aa12.83□□□□□ -0.36
LSG1-206ENST00000466391 DESI1Q6ICB0 168 aa12.82□□□□□ -0.36
LSG1-206ENST00000466391 PER1O15534 1290 aaPredicted RBP12.8□□□□□ -0.36
LSG1-206ENST00000466391 DXOO77932 396 aaKnown RBP12.8□□□□□ -0.36
LSG1-206ENST00000466391 USP17L8P0C7I0 530 aa12.8□□□□□ -0.36
LSG1-206ENST00000466391 MMP16P51512 607 aa12.8□□□□□ -0.36
LSG1-206ENST00000466391 LYPD8Q6UX82 237 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms