RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 WDR7Q9Y4E6 1490 aa10.45□□□□□ -0.74
NCL-208ENST00000466274 APLP1P51693 650 aa10.45□□□□□ -0.74
NCL-208ENST00000466274 EYA1Q99502 592 aa10.45□□□□□ -0.74
NCL-208ENST00000466274 MTRQ99707 1265 aa10.45□□□□□ -0.74
NCL-208ENST00000466274 IGF1RP08069 1367 aa10.44□□□□□ -0.74
NCL-208ENST00000466274 PHLDB1Q86UU1 1377 aa10.44□□□□□ -0.74
NCL-208ENST00000466274 PTGDRQ13258 359 aa10.43□□□□□ -0.74
NCL-208ENST00000466274 NUTM2FA1L443 756 aa10.42□□□□□ -0.74
NCL-208ENST00000466274 SEMA3EO15041 775 aa10.42□□□□□ -0.74
NCL-208ENST00000466274 ZNF516Q92618 1163 aa10.42□□□□□ -0.74
NCL-208ENST00000466274 IL21Q9HBE4 155 aa10.41□□□□□ -0.74
NCL-208ENST00000466274 ARAP3Q8WWN8 1544 aa10.41□□□□□ -0.74
NCL-208ENST00000466274 KIF21BO75037 1637 aa10.4□□□□□ -0.74
NCL-208ENST00000466274 BIVM-ERCC5R4GMW8 1640 aa10.4□□□□□ -0.74
NCL-208ENST00000466274 P3H3Q8IVL6 736 aa10.4□□□□□ -0.74
NCL-208ENST00000466274 SLF2Q8IX21 1173 aa10.4□□□□□ -0.74
NCL-208ENST00000466274 ADAMTSL3P82987 1691 aa10.4□□□□□ -0.74
NCL-208ENST00000466274 CUL7Q14999 1698 aa10.4□□□□□ -0.74
NCL-208ENST00000466274 FAM161AQ3B820 660 aa10.39□□□□□ -0.75
NCL-208ENST00000466274 PLCB2Q00722 1185 aa10.38□□□□□ -0.75
NCL-208ENST00000466274 KIF27Q86VH2 1401 aa10.38□□□□□ -0.75
NCL-208ENST00000466274 CARMIL1Q5VZK9 1371 aa10.38□□□□□ -0.75
NCL-208ENST00000466274 RAPGEF3O95398 923 aa10.37□□□□□ -0.75
NCL-208ENST00000466274 POGZQ7Z3K3 1410 aa10.37□□□□□ -0.75
NCL-208ENST00000466274 FAM9AQ8IZU1 332 aaPredicted RBP10.37□□□□□ -0.75
NCL-208ENST00000466274 ADGRG1Q9Y653 693 aa10.37□□□□□ -0.75
NCL-208ENST00000466274 YEATS2Q9ULM3 1422 aa10.36□□□□□ -0.75
NCL-208ENST00000466274 COPS2P61201 443 aa10.36□□□□□ -0.75
NCL-208ENST00000466274 NKX2-3Q8TAU0 364 aa10.36□□□□□ -0.75
NCL-208ENST00000466274 PPP1R18Q6NYC8 613 aa10.35□□□□□ -0.75
NCL-208ENST00000466274 ZCCHC11Q5TAX3 1644 aaKnown RBP10.34□□□□□ -0.75
NCL-208ENST00000466274 RBM46Q8TBY0 533 aaKnown RBP10.34□□□□□ -0.75
NCL-208ENST00000466274 NECTIN2Q92692 538 aa10.34□□□□□ -0.75
NCL-208ENST00000466274 DISP1Q96F81 1524 aa10.33□□□□□ -0.76
NCL-208ENST00000466274 FCHSD2O94868 740 aa10.33□□□□□ -0.76
NCL-208ENST00000466274 DNAJB2P25686 324 aa10.33□□□□□ -0.76
NCL-208ENST00000466274 SLC4A3P48751 1232 aa10.33□□□□□ -0.76
NCL-208ENST00000466274 IQGAP2Q13576 1575 aa10.33□□□□□ -0.76
NCL-208ENST00000466274 CFAP43Q8NDM7 1665 aa10.32□□□□□ -0.76
NCL-208ENST00000466274 RCCD1A6NED2 376 aa10.32□□□□□ -0.76
NCL-208ENST00000466274 PRKD2Q9BZL6 878 aa10.31□□□□□ -0.76
NCL-208ENST00000466274 TMEM134Q9H6X4 195 aa10.31□□□□□ -0.76
NCL-208ENST00000466274 MADDQ8WXG6 1647 aa10.31□□□□□ -0.76
NCL-208ENST00000466274 BCORL1Q5H9F3 1711 aa10.3□□□□□ -0.76
NCL-208ENST00000466274 RBM26Q5T8P6 1007 aaKnown RBP10.3□□□□□ -0.76
NCL-208ENST00000466274 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.3□□□□□ -0.76
NCL-208ENST00000466274 TESPA1A2RU30 521 aaPredicted RBP10.29□□□□□ -0.76
NCL-208ENST00000466274 IQSEC2Q5JU85 1478 aa10.29□□□□□ -0.76
NCL-208ENST00000466274 ZPR1O75312 459 aa10.28□□□□□ -0.76
NCL-208ENST00000466274 Q6ZNB5 142 aa10.28□□□□□ -0.76
NCL-208ENST00000466274 PCDHB3Q9Y5E6 796 aa10.28□□□□□ -0.76
NCL-208ENST00000466274 NEO1Q92859 1461 aa10.28□□□□□ -0.76
NCL-208ENST00000466274 BLOC1S3Q6QNY0 202 aa10.27□□□□□ -0.77
NCL-208ENST00000466274 PTPRTO14522 1441 aa10.26□□□□□ -0.77
NCL-208ENST00000466274 AKNAQ7Z591 1439 aa10.26□□□□□ -0.77
NCL-208ENST00000466274 FANCAO15360 1455 aa10.26□□□□□ -0.77
NCL-208ENST00000466274 UBAP1LF5GYI3 381 aa10.26□□□□□ -0.77
NCL-208ENST00000466274 MLECQ14165 292 aa10.26□□□□□ -0.77
NCL-208ENST00000466274 PRR14Q9BWN1 585 aa10.26□□□□□ -0.77
NCL-208ENST00000466274 UGGT2Q9NYU1 1516 aa10.26□□□□□ -0.77
NCL-208ENST00000466274 SLC10A3P09131 477 aa10.25□□□□□ -0.77
NCL-208ENST00000466274 HAP1P54257 671 aaPredicted RBP10.25□□□□□ -0.77
NCL-208ENST00000466274 GFRA3O60609 400 aa10.24□□□□□ -0.77
NCL-208ENST00000466274 PXYLP1Q8TE99 480 aa10.24□□□□□ -0.77
NCL-208ENST00000466274 RIMS1Q86UR5 1692 aaKnown RBP10.24□□□□□ -0.77
NCL-208ENST00000466274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.23□□□□□ -0.77
NCL-208ENST00000466274 OATP04181 439 aa10.23□□□□□ -0.77
NCL-208ENST00000466274 CFHP08603 1231 aa10.23□□□□□ -0.77
NCL-208ENST00000466274 FECHP22830 423 aa10.23□□□□□ -0.77
NCL-208ENST00000466274 HIC1Q14526 733 aa10.23□□□□□ -0.77
NCL-208ENST00000466274 UHRF1BP1Q6BDS2 1440 aa10.23□□□□□ -0.77
NCL-208ENST00000466274 ACTN4O43707 911 aaKnown RBP10.22□□□□□ -0.77
NCL-208ENST00000466274 GGCXP38435 758 aa10.22□□□□□ -0.77
NCL-208ENST00000466274 SMYD5Q6GMV2 418 aa10.22□□□□□ -0.77
NCL-208ENST00000466274 KDM2AQ9Y2K7 1162 aa10.22□□□□□ -0.77
NCL-208ENST00000466274 V9GY48 417 aaPredicted RBP10.22□□□□□ -0.77
NCL-208ENST00000466274 DENND4BO75064 1496 aaPredicted RBP10.22□□□□□ -0.77
NCL-208ENST00000466274 GOLGA3Q08378 1498 aa10.22□□□□□ -0.77
NCL-208ENST00000466274 KIAA0556O60303 1618 aa10.22□□□□□ -0.77
NCL-208ENST00000466274 SUPT5HO00267 1087 aaKnown RBP10.21□□□□□ -0.77
NCL-208ENST00000466274 TLL1O43897 1013 aa10.21□□□□□ -0.77
NCL-208ENST00000466274 KMT5BQ4FZB7 885 aa10.21□□□□□ -0.77
NCL-208ENST00000466274 METTL3Q86U44 580 aaKnown RBP10.2□□□□□ -0.78
NCL-208ENST00000466274 ARHGEF40Q8TER5 1519 aa10.19□□□□□ -0.78
NCL-208ENST00000466274 FHOD3Q2V2M9 1422 aa10.19□□□□□ -0.78
NCL-208ENST00000466274 ARID3CA6NKF2 412 aa10.19□□□□□ -0.78
NCL-208ENST00000466274 GNPATO15228 680 aa10.19□□□□□ -0.78
NCL-208ENST00000466274 LAPTM4AQ15012 233 aa10.19□□□□□ -0.78
NCL-208ENST00000466274 TMUB1Q9BVT8 246 aa10.19□□□□□ -0.78
NCL-208ENST00000466274 RAPGEF2Q9Y4G8 1499 aa10.18□□□□□ -0.78
NCL-208ENST00000466274 GPR37O15354 613 aa10.18□□□□□ -0.78
NCL-208ENST00000466274 CEBPAP49715 358 aaPredicted RBP10.18□□□□□ -0.78
NCL-208ENST00000466274 ABCA8O94911 1581 aa10.18□□□□□ -0.78
NCL-208ENST00000466274 MAGI2Q86UL8 1455 aa10.17□□□□□ -0.78
NCL-208ENST00000466274 RNF223E7ERA6 249 aa10.17□□□□□ -0.78
NCL-208ENST00000466274 LCE2BO14633 110 aa10.17□□□□□ -0.78
NCL-208ENST00000466274 NLRP7Q8WX94 980 aa10.17□□□□□ -0.78
NCL-208ENST00000466274 ATP10BO94823 1461 aa10.16□□□□□ -0.78
NCL-208ENST00000466274 TTC37Q6PGP7 1564 aa10.15□□□□□ -0.78
NCL-208ENST00000466274 PPEF1O14829 653 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms