RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 KCNA1Q09470 495 aa7.09□□□□□ -1.27
TRA2B-207ENST00000463328 RBM26Q5T8P6 1007 aaKnown RBP7.09□□□□□ -1.27
TRA2B-207ENST00000463328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.09□□□□□ -1.271e-7■□□□□ 10.8
TRA2B-207ENST00000463328 CFDP1Q9UEE9 299 aaPredicted RBP7.09□□□□□ -1.27
TRA2B-207ENST00000463328 SHANK2Q9UPX8 1470 aa7.09□□□□□ -1.27
TRA2B-207ENST00000463328 CDCA8Q53HL2 280 aa7.08□□□□□ -1.28
TRA2B-207ENST00000463328 CDC42BPAQ5VT25 1732 aa7.08□□□□□ -1.28
TRA2B-207ENST00000463328 KIF14Q15058 1648 aa7.08□□□□□ -1.28
TRA2B-207ENST00000463328 DENND4BO75064 1496 aaPredicted RBP7.08□□□□□ -1.28
TRA2B-207ENST00000463328 ABCC2Q92887 1545 aa7.08□□□□□ -1.28
TRA2B-207ENST00000463328 MIER1Q8N108 512 aa7.08□□□□□ -1.28
TRA2B-207ENST00000463328 ARHGEF5Q12774 1597 aa7.07□□□□□ -1.28
TRA2B-207ENST00000463328 CAMSAP2Q08AD1 1489 aa7.07□□□□□ -1.28
TRA2B-207ENST00000463328 KDM5BQ9UGL1 1544 aa7.07□□□□□ -1.28
TRA2B-207ENST00000463328 SIN3AQ96ST3 1273 aa7.07□□□□□ -1.28
TRA2B-207ENST00000463328 NCOA1Q15788 1441 aa7.07□□□□□ -1.28
TRA2B-207ENST00000463328 PATL2C9JE40 543 aaKnown RBP7.07□□□□□ -1.28
TRA2B-207ENST00000463328 OSCARQ8IYS5 282 aa7.07□□□□□ -1.28
TRA2B-207ENST00000463328 KDM6BO15054 1643 aa7.06□□□□□ -1.28
TRA2B-207ENST00000463328 ARHGEF1Q92888 912 aaKnown RBP7.06□□□□□ -1.28
TRA2B-207ENST00000463328 PARNO95453 639 aaKnown RBP7.06□□□□□ -1.28
TRA2B-207ENST00000463328 TCF3P15923 654 aa7.06□□□□□ -1.28
TRA2B-207ENST00000463328 RBM46Q8TBY0 533 aaKnown RBP7.05□□□□□ -1.28
TRA2B-207ENST00000463328 TONSLQ96HA7 1378 aa7.05□□□□□ -1.28
TRA2B-207ENST00000463328 KRI1Q8N9T8 703 aaKnown RBP7.05□□□□□ -1.28
TRA2B-207ENST00000463328 MPHOSPH9Q99550 1183 aa7.05□□□□□ -1.28
TRA2B-207ENST00000463328 PNMA2Q9UL42 364 aa7.05□□□□□ -1.28
TRA2B-207ENST00000463328 PLEKHH2Q8IVE3 1493 aa7.05□□□□□ -1.28
TRA2B-207ENST00000463328 PAX3P23760 479 aa7.04□□□□□ -1.28
TRA2B-207ENST00000463328 ANKRD30BQ9BXX2 1392 aa7.04□□□□□ -1.28
TRA2B-207ENST00000463328 KDM5DQ9BY66 1539 aa7.04□□□□□ -1.28
TRA2B-207ENST00000463328 MCCD1P59942 119 aaPredicted RBP7.04□□□□□ -1.28
TRA2B-207ENST00000463328 GLIPR1L2Q4G1C9 344 aa7.04□□□□□ -1.28
TRA2B-207ENST00000463328 MTA3Q9BTC8 594 aa7.04□□□□□ -1.28
TRA2B-207ENST00000463328 ANKRD30AQ9BXX3 1397 aa7.04□□□□□ -1.28
TRA2B-207ENST00000463328 PREX2Q70Z35 1606 aa7.04□□□□□ -1.28
TRA2B-207ENST00000463328 TSPY4P0CV99 314 aa7.03□□□□□ -1.28
TRA2B-207ENST00000463328 TSPY10P0CW01 314 aa7.03□□□□□ -1.28
TRA2B-207ENST00000463328 RRP7BPQ9NSQ0 103 aa7.03□□□□□ -1.28
TRA2B-207ENST00000463328 RPRD2Q5VT52 1461 aaKnown RBP7.03□□□□□ -1.28
TRA2B-207ENST00000463328 MAST1Q9Y2H9 1570 aa7.03□□□□□ -1.28
TRA2B-207ENST00000463328 STK25O00506 426 aa7.03□□□□□ -1.28
TRA2B-207ENST00000463328 NEUROD1Q13562 356 aa7.03□□□□□ -1.28
TRA2B-207ENST00000463328 MAMSTRQ6ZN01 415 aa7.03□□□□□ -1.28
TRA2B-207ENST00000463328 PMM1Q92871 262 aa7.03□□□□□ -1.28
TRA2B-207ENST00000463328 CDC42BPBQ9Y5S2 1711 aa7.03□□□□□ -1.28
TRA2B-207ENST00000463328 NOM1Q5C9Z4 860 aaKnown RBP7.03□□□□□ -1.28
TRA2B-207ENST00000463328 MORC4Q8TE76 937 aa7.03□□□□□ -1.28
TRA2B-207ENST00000463328 KIAA1107Q9UPP5 1409 aa7.02□□□□□ -1.29
TRA2B-207ENST00000463328 RINLQ6ZS11 566 aa7.02□□□□□ -1.29
TRA2B-207ENST00000463328 UBXN4Q92575 508 aa7.02□□□□□ -1.29
TRA2B-207ENST00000463328 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.02□□□□□ -1.29
TRA2B-207ENST00000463328 MBD5Q9P267 1494 aa7.02□□□□□ -1.29
TRA2B-207ENST00000463328 SBNO2Q9Y2G9 1366 aa7.02□□□□□ -1.29
TRA2B-207ENST00000463328 ZNF644Q9H582 1327 aaPredicted RBP7.02□□□□□ -1.29
TRA2B-207ENST00000463328 TSR1Q2NL82 804 aaKnown RBP7.02□□□□□ -1.29
TRA2B-207ENST00000463328 CHIC2Q9UKJ5 165 aa7.02□□□□□ -1.29
TRA2B-207ENST00000463328 PZPP20742 1482 aa7.01□□□□□ -1.29
TRA2B-207ENST00000463328 MYBPC2Q14324 1141 aa7.01□□□□□ -1.29
TRA2B-207ENST00000463328 C8orf37Q96NL8 207 aa7.01□□□□□ -1.29
TRA2B-207ENST00000463328 CCER2I3L3R5 266 aa7.01□□□□□ -1.29
TRA2B-207ENST00000463328 CREB3O43889 395 aa7.01□□□□□ -1.29
TRA2B-207ENST00000463328 LONRF3Q496Y0 759 aa7.01□□□□□ -1.29
TRA2B-207ENST00000463328 DPH6Q7L8W6 267 aa7.01□□□□□ -1.29
TRA2B-207ENST00000463328 ARAP3Q8WWN8 1544 aa7.01□□□□□ -1.29
TRA2B-207ENST00000463328 ZNF16P17020 682 aaPredicted RBP7□□□□□ -1.29
TRA2B-207ENST00000463328 EFCAB2Q5VUJ9 269 aa7□□□□□ -1.29
TRA2B-207ENST00000463328 KRBA2Q6ZNG9 492 aa7□□□□□ -1.29
TRA2B-207ENST00000463328 PHF14O94880 888 aa7□□□□□ -1.29
TRA2B-207ENST00000463328 ZFYVE27Q5T4F4 411 aa7□□□□□ -1.29
TRA2B-207ENST00000463328 TSHZ1Q6ZSZ6 1077 aa7□□□□□ -1.29
TRA2B-207ENST00000463328 TRIM52Q96A61 297 aa7□□□□□ -1.29
TRA2B-207ENST00000463328 GTF2E1P29083 439 aaPredicted RBP6.99□□□□□ -1.29
TRA2B-207ENST00000463328 GABBR1Q9UBS5 961 aa6.99□□□□□ -1.29
TRA2B-207ENST00000463328 PLCH2O75038 1416 aa6.99□□□□□ -1.29
TRA2B-207ENST00000463328 C9orf84Q5VXU9 1444 aa6.99□□□□□ -1.29
TRA2B-207ENST00000463328 ANKRD50Q9ULJ7 1429 aa6.99□□□□□ -1.29
TRA2B-207ENST00000463328 ERCC6L2Q5T890 1561 aa6.99□□□□□ -1.29
TRA2B-207ENST00000463328 SAMD9LQ8IVG5 1584 aa6.99□□□□□ -1.29
TRA2B-207ENST00000463328 CCDC141Q6ZP82 1450 aa6.99□□□□□ -1.29
TRA2B-207ENST00000463328 MYO5CQ9NQX4 1742 aa6.99□□□□□ -1.29
TRA2B-207ENST00000463328 TEX14Q8IWB6 1497 aa6.99□□□□□ -1.29
TRA2B-207ENST00000463328 CLEC4GQ6UXB4 293 aa6.98□□□□□ -1.29
TRA2B-207ENST00000463328 SMC5Q8IY18 1101 aa6.98□□□□□ -1.29
TRA2B-207ENST00000463328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.98□□□□□ -1.29
TRA2B-207ENST00000463328 POLR1AO95602 1720 aaPredicted RBP6.98□□□□□ -1.29
TRA2B-207ENST00000463328 PLXNC1O60486 1568 aa6.98□□□□□ -1.29
TRA2B-207ENST00000463328 CCDC194A0A1B0GVG4 234 aa6.98□□□□□ -1.29
TRA2B-207ENST00000463328 SOX12O15370 315 aa6.98□□□□□ -1.29
TRA2B-207ENST00000463328 ERCC3P19447 782 aa6.98□□□□□ -1.29
TRA2B-207ENST00000463328 LARGE2Q8N3Y3 721 aa6.98□□□□□ -1.29
TRA2B-207ENST00000463328 UBA5Q9GZZ9 404 aa6.98□□□□□ -1.29
TRA2B-207ENST00000463328 KIF4AO95239 1232 aa6.97□□□□□ -1.29
TRA2B-207ENST00000463328 APLP1P51693 650 aa6.97□□□□□ -1.29
TRA2B-207ENST00000463328 PSME1Q06323 249 aa6.97□□□□□ -1.29
TRA2B-207ENST00000463328 DDRGK1Q96HY6 314 aa6.97□□□□□ -1.29
TRA2B-207ENST00000463328 MAF1Q9H063 256 aa6.97□□□□□ -1.29
TRA2B-207ENST00000463328 ZCCHC11Q5TAX3 1644 aaKnown RBP6.97□□□□□ -1.29
TRA2B-207ENST00000463328 NAALADL2Q58DX5 795 aa6.97□□□□□ -1.29
TRA2B-207ENST00000463328 WDR7Q9Y4E6 1490 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms