RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 CPS1P31327 1500 aa23.58■■□□□ 1.36
CDK11A-209ENST00000460465 AMER1Q5JTC6 1135 aaPredicted RBP23.58■■□□□ 1.36
CDK11A-209ENST00000460465 TMC1Q8TDI8 760 aa23.57■■□□□ 1.36
CDK11A-209ENST00000460465 BRD4O60885 1362 aaPredicted RBP23.57■■□□□ 1.36
CDK11A-209ENST00000460465 CABP2Q9NPB3 220 aa23.56■■□□□ 1.36
CDK11A-209ENST00000460465 PLEKHH1Q9ULM0 1364 aa23.56■■□□□ 1.36
CDK11A-209ENST00000460465 MED14O60244 1454 aa23.56■■□□□ 1.36
CDK11A-209ENST00000460465 TECPR2O15040 1411 aa23.56■■□□□ 1.36
CDK11A-209ENST00000460465 WAPLQ7Z5K2 1190 aa23.55■■□□□ 1.36
CDK11A-209ENST00000460465 SLC12A5Q9H2X9 1139 aa23.55■■□□□ 1.36
CDK11A-209ENST00000460465 CARD14Q9BXL6 1004 aa23.55■■□□□ 1.36
CDK11A-209ENST00000460465 NPC1L1Q9UHC9 1359 aa23.54■■□□□ 1.36
CDK11A-209ENST00000460465 SETD1BQ9UPS6 1966 aaKnown RBP23.54■■□□□ 1.36
CDK11A-209ENST00000460465 SRPK2P78362 688 aaKnown RBP23.53■■□□□ 1.36
CDK11A-209ENST00000460465 NLRP13Q86W25 1043 aa23.53■■□□□ 1.36
CDK11A-209ENST00000460465 HNRNPUQ00839 825 aaKnown RBP eCLIP23.52■■□□□ 1.36
CDK11A-209ENST00000460465 FAM135BQ49AJ0 1406 aa23.52■■□□□ 1.36
CDK11A-209ENST00000460465 DIP2AQ14689 1571 aa23.52■■□□□ 1.35
CDK11A-209ENST00000460465 PELP1Q8IZL8 1130 aaKnown RBP23.51■■□□□ 1.35
CDK11A-209ENST00000460465 SLC26A8Q96RN1 970 aa23.5■■□□□ 1.35
CDK11A-209ENST00000460465 NSD3Q9BZ95 1437 aa23.5■■□□□ 1.35
CDK11A-209ENST00000460465 USP32Q8NFA0 1604 aa23.5■■□□□ 1.35
CDK11A-209ENST00000460465 ATAD2Q6PL18 1390 aa23.5■■□□□ 1.35
CDK11A-209ENST00000460465 SIRT1Q96EB6 747 aa23.49■■□□□ 1.35
CDK11A-209ENST00000460465 NINLQ9Y2I6 1382 aa23.49■■□□□ 1.35
CDK11A-209ENST00000460465 ANKRD36BQ8N2N9 1353 aa23.48■■□□□ 1.35
CDK11A-209ENST00000460465 PNISRQ8TF01 805 aaKnown RBP23.48■■□□□ 1.35
CDK11A-209ENST00000460465 CDK19Q9BWU1 502 aa23.48■■□□□ 1.35
CDK11A-209ENST00000460465 PTPRUQ92729 1446 aa23.47■■□□□ 1.35
CDK11A-209ENST00000460465 ROBO2Q9HCK4 1378 aa23.46■■□□□ 1.35
CDK11A-209ENST00000460465 SCAF1Q9H7N4 1312 aaKnown RBP23.46■■□□□ 1.35
CDK11A-209ENST00000460465 TBX22Q9Y458 520 aa23.45■■□□□ 1.35
CDK11A-209ENST00000460465 PPP2R1AP30153 589 aa23.43■■□□□ 1.34
CDK11A-209ENST00000460465 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.43■■□□□ 1.34
CDK11A-209ENST00000460465 A0A1W2PP64 1363 aa23.42■■□□□ 1.34
CDK11A-209ENST00000460465 ADGRB2O60241 1585 aa23.41■■□□□ 1.34
CDK11A-209ENST00000460465 XRN1Q8IZH2 1706 aaKnown RBP23.41■■□□□ 1.34
CDK11A-209ENST00000460465 CD163L1Q9NR16 1453 aa23.41■■□□□ 1.34
CDK11A-209ENST00000460465 GTF3C3Q9Y5Q9 886 aa23.41■■□□□ 1.34
CDK11A-209ENST00000460465 WASLO00401 505 aaPredicted RBP23.4■■□□□ 1.34
CDK11A-209ENST00000460465 ANKLE2Q86XL3 938 aa23.39■■□□□ 1.34
CDK11A-209ENST00000460465 AMOTL2Q9Y2J4 779 aa23.38■■□□□ 1.33
CDK11A-209ENST00000460465 CGNL1Q0VF96 1302 aa23.38■■□□□ 1.33
CDK11A-209ENST00000460465 PTCH1Q13635 1447 aa23.37■■□□□ 1.33
CDK11A-209ENST00000460465 TERF2IPQ9NYB0 399 aa23.37■■□□□ 1.33
CDK11A-209ENST00000460465 CABP1Q9NZU7 370 aa23.36■■□□□ 1.33
CDK11A-209ENST00000460465 ATP7BP35670 1465 aa23.35■■□□□ 1.33
CDK11A-209ENST00000460465 ZBED9Q6R2W3 1325 aa23.35■■□□□ 1.33
CDK11A-209ENST00000460465 ANKRD26Q9UPS8 1709 aa23.34■■□□□ 1.33
CDK11A-209ENST00000460465 NSD2O96028 1365 aa23.34■■□□□ 1.33
CDK11A-209ENST00000460465 PIK3R4Q99570 1358 aa23.34■■□□□ 1.33
CDK11A-209ENST00000460465 CHD2O14647 1828 aaKnown RBP23.33■■□□□ 1.33
CDK11A-209ENST00000460465 HDGFL2Q7Z4V5 671 aaPredicted RBP23.33■■□□□ 1.33
CDK11A-209ENST00000460465 KIF20BQ96Q89 1820 aa23.33■■□□□ 1.33
CDK11A-209ENST00000460465 MORC1Q86VD1 984 aa23.32■■□□□ 1.32
CDK11A-209ENST00000460465 PPIP5K1Q6PFW1 1433 aa23.32■■□□□ 1.32
CDK11A-209ENST00000460465 ITSN1Q15811 1721 aa23.3■■□□□ 1.32
CDK11A-209ENST00000460465 NUDT16Q96DE0 195 aaKnown RBP23.3■■□□□ 1.32
CDK11A-209ENST00000460465 TOPAZ1Q8N9V7 1692 aa23.3■■□□□ 1.32
CDK11A-209ENST00000460465 CDC42BPGQ6DT37 1551 aa23.29■■□□□ 1.32
CDK11A-209ENST00000460465 AKAP12Q02952 1782 aa23.29■■□□□ 1.32
CDK11A-209ENST00000460465 NPHP4O75161 1426 aaPredicted RBP23.28■■□□□ 1.32
CDK11A-209ENST00000460465 MON2Q7Z3U7 1717 aa23.27■■□□□ 1.32
CDK11A-209ENST00000460465 PRR36Q9H6K5 1346 aa23.27■■□□□ 1.32
CDK11A-209ENST00000460465 KCNA6P17658 529 aa23.27■■□□□ 1.32
CDK11A-209ENST00000460465 CPSF1Q10570 1443 aaKnown RBP23.26■■□□□ 1.31
CDK11A-209ENST00000460465 INSRP06213 1382 aa23.26■■□□□ 1.31
CDK11A-209ENST00000460465 BLMP54132 1417 aaPredicted RBP23.26■■□□□ 1.31
CDK11A-209ENST00000460465 TNNT2P45379 298 aaPredicted RBP23.26■■□□□ 1.31
CDK11A-209ENST00000460465 CCDC61Q9Y6R9 512 aa23.26■■□□□ 1.31
CDK11A-209ENST00000460465 NCKAP5LQ9HCH0 1330 aa23.26■■□□□ 1.31
CDK11A-209ENST00000460465 SENP3-EIF4A1A0A087X0R7 540 aa23.24■■□□□ 1.31
CDK11A-209ENST00000460465 GGNBP2Q9H3C7 697 aa23.23■■□□□ 1.31
CDK11A-209ENST00000460465 FYB1O15117 783 aa23.22■■□□□ 1.31
CDK11A-209ENST00000460465 WDR43Q15061 677 aaKnown RBP eCLIP23.22■■□□□ 1.31
CDK11A-209ENST00000460465 POLR3AO14802 1390 aaPredicted RBP23.22■■□□□ 1.31
CDK11A-209ENST00000460465 RGPD8O14715 1765 aaPredicted RBP23.21■■□□□ 1.31
CDK11A-209ENST00000460465 ADAMTS8Q9UP79 889 aa23.21■■□□□ 1.31
CDK11A-209ENST00000460465 EDC4Q6P2E9 1401 aaKnown RBP23.21■■□□□ 1.31
CDK11A-209ENST00000460465 NALCNQ8IZF0 1738 aa23.21■■□□□ 1.31
CDK11A-209ENST00000460465 SHPRHQ149N8 1683 aa23.2■■□□□ 1.31
CDK11A-209ENST00000460465 NUTM2FA1L443 756 aa23.19■■□□□ 1.3
CDK11A-209ENST00000460465 FMN2Q9NZ56 1722 aa23.18■■□□□ 1.3
CDK11A-209ENST00000460465 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.18■■□□□ 1.3
CDK11A-209ENST00000460465 NKTRP30414 1462 aaKnown RBP23.18■■□□□ 1.3
CDK11A-209ENST00000460465 NRKQ7Z2Y5 1582 aa23.17■■□□□ 1.3
CDK11A-209ENST00000460465 MTHFSP49914 203 aa23.16■■□□□ 1.3
CDK11A-209ENST00000460465 NWD1Q149M9 1564 aa23.16■■□□□ 1.3
CDK11A-209ENST00000460465 KDM4FA0A1W2PPD8 638 aa23.15■■□□□ 1.3
CDK11A-209ENST00000460465 PLEKHG3A1L390 1219 aa23.14■■□□□ 1.29
CDK11A-209ENST00000460465 ZNF692Q9BU19 519 aaPredicted RBP23.14■■□□□ 1.29
CDK11A-209ENST00000460465 ACEP12821 1306 aa23.12■■□□□ 1.29
CDK11A-209ENST00000460465 ANKARQ7Z5J8 1434 aa23.11■■□□□ 1.29
CDK11A-209ENST00000460465 CFAP53Q96M91 514 aa23.11■■□□□ 1.29
CDK11A-209ENST00000460465 SALL2Q9Y467 1007 aaPredicted RBP23.11■■□□□ 1.29
CDK11A-209ENST00000460465 NME9Q86XW9 330 aa23.1■■□□□ 1.29
CDK11A-209ENST00000460465 SMG6Q86US8 1419 aaKnown RBP23.1■■□□□ 1.29
CDK11A-209ENST00000460465 USP6P35125 1406 aa23.09■■□□□ 1.29
CDK11A-209ENST00000460465 MAP2P11137 1827 aaKnown RBP23.08■■□□□ 1.29
CDK11A-209ENST00000460465 RBM33Q96EV2 1170 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms