RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 C14orf37Q86TY3 774 aa13.46□□□□□ -0.25
CHCHD4P3-201ENST00000455954 RALGAPBQ86X10 1494 aa13.45□□□□□ -0.26
CHCHD4P3-201ENST00000455954 FAM135BQ49AJ0 1406 aa13.45□□□□□ -0.26
CHCHD4P3-201ENST00000455954 PPLO60437 1756 aa13.45□□□□□ -0.26
CHCHD4P3-201ENST00000455954 C19orf44Q9H6X5 657 aa13.44□□□□□ -0.26
CHCHD4P3-201ENST00000455954 CCDC184Q52MB2 194 aa13.43□□□□□ -0.26
CHCHD4P3-201ENST00000455954 XRN1Q8IZH2 1706 aaKnown RBP13.43□□□□□ -0.26
CHCHD4P3-201ENST00000455954 SLAIN2Q9P270 581 aa13.43□□□□□ -0.26
CHCHD4P3-201ENST00000455954 ADGRF5Q8IZF2 1346 aa13.42□□□□□ -0.26
CHCHD4P3-201ENST00000455954 C11orf95C9JLR9 678 aaPredicted RBP13.42□□□□□ -0.26
CHCHD4P3-201ENST00000455954 ATF3P18847 181 aa13.42□□□□□ -0.26
CHCHD4P3-201ENST00000455954 DEKP35659 375 aaKnown RBP13.42□□□□□ -0.26
CHCHD4P3-201ENST00000455954 ANP32AP39687 249 aaKnown RBP13.42□□□□□ -0.26
CHCHD4P3-201ENST00000455954 B4GALNT3Q6L9W6 998 aa13.42□□□□□ -0.26
CHCHD4P3-201ENST00000455954 CADPS2Q86UW7 1296 aa13.42□□□□□ -0.26
CHCHD4P3-201ENST00000455954 FAM9BQ8IZU0 186 aa13.42□□□□□ -0.26
CHCHD4P3-201ENST00000455954 NBPF8Q3BBV2 869 aa13.41□□□□□ -0.26
CHCHD4P3-201ENST00000455954 INSRP06213 1382 aa13.41□□□□□ -0.26
CHCHD4P3-201ENST00000455954 DISP3Q9P2K9 1392 aa13.41□□□□□ -0.26
CHCHD4P3-201ENST00000455954 SETD1AO15047 1707 aaKnown RBP13.39□□□□□ -0.27
CHCHD4P3-201ENST00000455954 IPO9Q96P70 1041 aaKnown RBP13.39□□□□□ -0.27
CHCHD4P3-201ENST00000455954 LRPPRCP42704 1394 aaKnown RBP13.39□□□□□ -0.27
CHCHD4P3-201ENST00000455954 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.39□□□□□ -0.27
CHCHD4P3-201ENST00000455954 IFT172Q9UG01 1749 aa13.39□□□□□ -0.27
CHCHD4P3-201ENST00000455954 ROBO1Q9Y6N7 1651 aa13.38□□□□□ -0.27
CHCHD4P3-201ENST00000455954 USP47Q96K76 1375 aa13.38□□□□□ -0.27
CHCHD4P3-201ENST00000455954 DCCP43146 1447 aa13.38□□□□□ -0.27
CHCHD4P3-201ENST00000455954 BRD4O60885 1362 aaPredicted RBP13.37□□□□□ -0.27
CHCHD4P3-201ENST00000455954 LAMC1P11047 1609 aa13.37□□□□□ -0.27
CHCHD4P3-201ENST00000455954 PIK3C2GO75747 1445 aa13.37□□□□□ -0.27
CHCHD4P3-201ENST00000455954 PTCH1Q13635 1447 aa13.37□□□□□ -0.27
CHCHD4P3-201ENST00000455954 PRAG1Q86YV5 1406 aa13.37□□□□□ -0.27
CHCHD4P3-201ENST00000455954 ROBO2Q9HCK4 1378 aa13.36□□□□□ -0.27
CHCHD4P3-201ENST00000455954 CCDC136Q96JN2 1154 aa13.36□□□□□ -0.27
CHCHD4P3-201ENST00000455954 ADGRL3Q9HAR2 1447 aa13.36□□□□□ -0.27
CHCHD4P3-201ENST00000455954 MYOM2P54296 1465 aa13.36□□□□□ -0.27
CHCHD4P3-201ENST00000455954 C14orf93Q9H972 538 aaKnown RBP13.35□□□□□ -0.27
CHCHD4P3-201ENST00000455954 TMEM132EQ6IEE7 984 aa13.34□□□□□ -0.27
CHCHD4P3-201ENST00000455954 NRXN1Q9ULB1 1477 aa13.34□□□□□ -0.27
CHCHD4P3-201ENST00000455954 TCERG1O14776 1098 aaKnown RBP13.33□□□□□ -0.28
CHCHD4P3-201ENST00000455954 RTL5Q5HYW3 569 aaPredicted RBP13.33□□□□□ -0.28
CHCHD4P3-201ENST00000455954 STAC3Q96MF2 364 aa13.33□□□□□ -0.28
CHCHD4P3-201ENST00000455954 STK26Q9P289 416 aa13.33□□□□□ -0.28
CHCHD4P3-201ENST00000455954 ABCC11Q96J66 1382 aa13.32□□□□□ -0.28
CHCHD4P3-201ENST00000455954 MS4A1P11836 297 aa13.32□□□□□ -0.28
CHCHD4P3-201ENST00000455954 PDE3BQ13370 1112 aa13.32□□□□□ -0.28
CHCHD4P3-201ENST00000455954 RALBP1Q15311 655 aa13.32□□□□□ -0.28
CHCHD4P3-201ENST00000455954 CFAP70Q5T0N1 1121 aa13.32□□□□□ -0.28
CHCHD4P3-201ENST00000455954 BRINP3Q76B58 766 aa13.32□□□□□ -0.28
CHCHD4P3-201ENST00000455954 DCAF11Q8TEB1 546 aa13.32□□□□□ -0.28
CHCHD4P3-201ENST00000455954 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
CHCHD4P3-201ENST00000455954 USP35Q9P2H5 1018 aa13.32□□□□□ -0.28
CHCHD4P3-201ENST00000455954 ZBTB47Q9UFB7 747 aaPredicted RBP13.32□□□□□ -0.28
CHCHD4P3-201ENST00000455954 MED1Q15648 1581 aaPredicted RBP13.32□□□□□ -0.28
CHCHD4P3-201ENST00000455954 TECPR2O15040 1411 aa13.31□□□□□ -0.28
CHCHD4P3-201ENST00000455954 MST1RQ04912 1400 aa13.31□□□□□ -0.28
CHCHD4P3-201ENST00000455954 NALCNQ8IZF0 1738 aa13.31□□□□□ -0.28
CHCHD4P3-201ENST00000455954 KDM2AQ9Y2K7 1162 aa13.31□□□□□ -0.28
CHCHD4P3-201ENST00000455954 YTHDC2Q9H6S0 1430 aaKnown RBP13.3□□□□□ -0.28
CHCHD4P3-201ENST00000455954 ASXL1Q8IXJ9 1541 aa13.3□□□□□ -0.28
CHCHD4P3-201ENST00000455954 SIRT1Q96EB6 747 aa13.3□□□□□ -0.28
CHCHD4P3-201ENST00000455954 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
CHCHD4P3-201ENST00000455954 WAPLQ7Z5K2 1190 aa13.29□□□□□ -0.28
CHCHD4P3-201ENST00000455954 MYBBP1AQ9BQG0 1328 aaKnown RBP13.29□□□□□ -0.28
CHCHD4P3-201ENST00000455954 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
CHCHD4P3-201ENST00000455954 PAK3O75914 559 aaPredicted RBP13.28□□□□□ -0.28
CHCHD4P3-201ENST00000455954 PHF23Q9BUL5 403 aaPredicted RBP13.28□□□□□ -0.28
CHCHD4P3-201ENST00000455954 JCADQ9P266 1359 aa13.28□□□□□ -0.28
CHCHD4P3-201ENST00000455954 TRPM1Q7Z4N2 1603 aa13.28□□□□□ -0.28
CHCHD4P3-201ENST00000455954 KNDC1Q76NI1 1749 aa13.27□□□□□ -0.28
CHCHD4P3-201ENST00000455954 ILDR2Q71H61 639 aa13.27□□□□□ -0.29
CHCHD4P3-201ENST00000455954 C1orf167Q5SNV9 1468 aa13.27□□□□□ -0.29
CHCHD4P3-201ENST00000455954 COL16A1Q07092 1604 aaPredicted RBP13.27□□□□□ -0.29
CHCHD4P3-201ENST00000455954 RRP1P56182 461 aaKnown RBP13.26□□□□□ -0.29
CHCHD4P3-201ENST00000455954 PLEKHH1Q9ULM0 1364 aa13.26□□□□□ -0.29
CHCHD4P3-201ENST00000455954 TMC1Q8TDI8 760 aa13.25□□□□□ -0.29
CHCHD4P3-201ENST00000455954 CDC42BPGQ6DT37 1551 aa13.24□□□□□ -0.29
CHCHD4P3-201ENST00000455954 PARD3Q8TEW0 1356 aa13.24□□□□□ -0.29
CHCHD4P3-201ENST00000455954 PPM1GO15355 546 aaPredicted RBP13.24□□□□□ -0.29
CHCHD4P3-201ENST00000455954 ORAI2Q96SN7 254 aa13.24□□□□□ -0.29
CHCHD4P3-201ENST00000455954 SPATA31A6Q5VVP1 1343 aa13.23□□□□□ -0.29
CHCHD4P3-201ENST00000455954 LRRC59Q96AG4 307 aaKnown RBP13.23□□□□□ -0.29
CHCHD4P3-201ENST00000455954 PRAM1Q96QH2 718 aa13.23□□□□□ -0.29
CHCHD4P3-201ENST00000455954 ADGRB1O14514 1584 aa13.23□□□□□ -0.29
CHCHD4P3-201ENST00000455954 BLMP54132 1417 aaPredicted RBP13.22□□□□□ -0.29
CHCHD4P3-201ENST00000455954 NHSL1Q5SYE7 1610 aa13.22□□□□□ -0.29
CHCHD4P3-201ENST00000455954 ESCO1Q5FWF5 840 aa13.22□□□□□ -0.29
CHCHD4P3-201ENST00000455954 DDX17Q92841 729 aaKnown RBP13.22□□□□□ -0.29
CHCHD4P3-201ENST00000455954 POGKQ9P215 609 aa13.22□□□□□ -0.29
CHCHD4P3-201ENST00000455954 DLC1Q96QB1 1528 aa13.22□□□□□ -0.29
CHCHD4P3-201ENST00000455954 DDRGK1Q96HY6 314 aa13.21□□□□□ -0.29
CHCHD4P3-201ENST00000455954 TRAK1Q9UPV9 953 aa13.21□□□□□ -0.29
CHCHD4P3-201ENST00000455954 SAFB2Q14151 953 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHCHD4P3-201ENST00000455954 NLRP13Q86W25 1043 aa13.2□□□□□ -0.3
CHCHD4P3-201ENST00000455954 GPRASP1Q5JY77 1395 aa13.2□□□□□ -0.3
CHCHD4P3-201ENST00000455954 SOS2Q07890 1332 aaPredicted RBP13.19□□□□□ -0.3
CHCHD4P3-201ENST00000455954 SHPRHQ149N8 1683 aa13.19□□□□□ -0.3
CHCHD4P3-201ENST00000455954 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
CHCHD4P3-201ENST00000455954 NBR1Q14596 966 aa13.19□□□□□ -0.3
CHCHD4P3-201ENST00000455954 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms