RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 KIAA1210Q9ULL0 1709 aa14.26□□□□□ -0.13
GTF3C2-206ENST00000454704 NUTM2DQ5VT03 806 aaPredicted RBP14.26□□□□□ -0.13
GTF3C2-206ENST00000454704 NUDCQ9Y266 331 aa14.26□□□□□ -0.13
GTF3C2-206ENST00000454704 SETD1AO15047 1707 aaKnown RBP14.26□□□□□ -0.13
GTF3C2-206ENST00000454704 SPHKAPQ2M3C7 1700 aa14.26□□□□□ -0.13
GTF3C2-206ENST00000454704 COL16A1Q07092 1604 aaPredicted RBP14.26□□□□□ -0.13
GTF3C2-206ENST00000454704 ADAMTS13Q76LX8 1427 aa14.26□□□□□ -0.13
GTF3C2-206ENST00000454704 DIP2AQ14689 1571 aa14.25□□□□□ -0.13
GTF3C2-206ENST00000454704 HDGFP51858 240 aaKnown RBP14.25□□□□□ -0.13
GTF3C2-206ENST00000454704 JCADQ9P266 1359 aa14.25□□□□□ -0.13
GTF3C2-206ENST00000454704 C14orf37Q86TY3 774 aa14.24□□□□□ -0.13
GTF3C2-206ENST00000454704 ZNF326Q5BKZ1 582 aaKnown RBP14.24□□□□□ -0.13
GTF3C2-206ENST00000454704 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.24□□□□□ -0.13
GTF3C2-206ENST00000454704 TBX22Q9Y458 520 aa14.24□□□□□ -0.13
GTF3C2-206ENST00000454704 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.23□□□□□ -0.13
GTF3C2-206ENST00000454704 TRPM2O94759 1503 aa14.23□□□□□ -0.13
GTF3C2-206ENST00000454704 DCAF11Q8TEB1 546 aa14.23□□□□□ -0.13
GTF3C2-206ENST00000454704 PNISRQ8TF01 805 aaKnown RBP14.23□□□□□ -0.13
GTF3C2-206ENST00000454704 PARD3Q8TEW0 1356 aa14.22□□□□□ -0.13
GTF3C2-206ENST00000454704 NCOA3Q9Y6Q9 1424 aa14.22□□□□□ -0.13
GTF3C2-206ENST00000454704 TMC1Q8TDI8 760 aa14.22□□□□□ -0.13
GTF3C2-206ENST00000454704 LRP6O75581 1613 aa14.21□□□□□ -0.13
GTF3C2-206ENST00000454704 AHDC1Q5TGY3 1603 aaPredicted RBP14.2□□□□□ -0.14
GTF3C2-206ENST00000454704 ST20-MTHFSA0A0A6YYL1 179 aa14.2□□□□□ -0.14
GTF3C2-206ENST00000454704 PDE3BQ13370 1112 aa14.2□□□□□ -0.14
GTF3C2-206ENST00000454704 PIK3R4Q99570 1358 aa14.2□□□□□ -0.14
GTF3C2-206ENST00000454704 NLRP13Q86W25 1043 aa14.19□□□□□ -0.14
GTF3C2-206ENST00000454704 PTPRUQ92729 1446 aa14.19□□□□□ -0.14
GTF3C2-206ENST00000454704 ATF3P18847 181 aa14.18□□□□□ -0.14
GTF3C2-206ENST00000454704 CADPS2Q86UW7 1296 aa14.18□□□□□ -0.14
GTF3C2-206ENST00000454704 NRXN3Q9Y4C0 1643 aa14.18□□□□□ -0.14
GTF3C2-206ENST00000454704 SHPRHQ149N8 1683 aa14.18□□□□□ -0.14
GTF3C2-206ENST00000454704 C19orf44Q9H6X5 657 aa14.17□□□□□ -0.14
GTF3C2-206ENST00000454704 XRN1Q8IZH2 1706 aaKnown RBP14.17□□□□□ -0.14
GTF3C2-206ENST00000454704 SLC24A1O60721 1099 aa14.16□□□□□ -0.14
GTF3C2-206ENST00000454704 MEX3CQ5U5Q3 659 aaKnown RBP14.16□□□□□ -0.14
GTF3C2-206ENST00000454704 AMOTL2Q9Y2J4 779 aa14.16□□□□□ -0.14
GTF3C2-206ENST00000454704 SPATA31A6Q5VVP1 1343 aa14.16□□□□□ -0.14
GTF3C2-206ENST00000454704 SETBP1Q9Y6X0 1596 aa14.15□□□□□ -0.14
GTF3C2-206ENST00000454704 KDM2AQ9Y2K7 1162 aa14.15□□□□□ -0.14
GTF3C2-206ENST00000454704 ASXL1Q8IXJ9 1541 aa14.14□□□□□ -0.15
GTF3C2-206ENST00000454704 TMF1P82094 1093 aa14.14□□□□□ -0.15
GTF3C2-206ENST00000454704 BRINP3Q76B58 766 aa14.14□□□□□ -0.15
GTF3C2-206ENST00000454704 POLR3GLQ9BT43 218 aa14.14□□□□□ -0.15
GTF3C2-206ENST00000454704 DCCP43146 1447 aa14.13□□□□□ -0.15
GTF3C2-206ENST00000454704 CDCA8Q53HL2 280 aa14.13□□□□□ -0.15
GTF3C2-206ENST00000454704 KIF1BO60333 1816 aa14.13□□□□□ -0.15
GTF3C2-206ENST00000454704 BLMP54132 1417 aaPredicted RBP14.12□□□□□ -0.15
GTF3C2-206ENST00000454704 IFT172Q9UG01 1749 aa14.11□□□□□ -0.15
GTF3C2-206ENST00000454704 CLTCL1P53675 1640 aa14.11□□□□□ -0.15
GTF3C2-206ENST00000454704 ZNF772Q68DY9 489 aaPredicted RBP14.11□□□□□ -0.15
GTF3C2-206ENST00000454704 MST1RQ04912 1400 aa14.11□□□□□ -0.15
GTF3C2-206ENST00000454704 METP08581 1390 aa14.1□□□□□ -0.15
GTF3C2-206ENST00000454704 NHSL1Q5SYE7 1610 aa14.1□□□□□ -0.15
GTF3C2-206ENST00000454704 PER1O15534 1290 aaPredicted RBP14.1□□□□□ -0.15
GTF3C2-206ENST00000454704 IRX6P78412 446 aaPredicted RBP14.1□□□□□ -0.15
GTF3C2-206ENST00000454704 MYOM2P54296 1465 aa14.1□□□□□ -0.15
GTF3C2-206ENST00000454704 EIF3AQ14152 1382 aaKnown RBP14.1□□□□□ -0.15
GTF3C2-206ENST00000454704 NEXMIFQ5QGS0 1516 aa14.09□□□□□ -0.15
GTF3C2-206ENST00000454704 NALCNQ8IZF0 1738 aa14.09□□□□□ -0.15
GTF3C2-206ENST00000454704 NUTM2BA6NNL0 878 aaPredicted RBP14.09□□□□□ -0.15
GTF3C2-206ENST00000454704 NUTM2EB1AL46 878 aaPredicted RBP14.09□□□□□ -0.15
GTF3C2-206ENST00000454704 NUTM2AQ8IVF1 878 aaPredicted RBP14.09□□□□□ -0.15
GTF3C2-206ENST00000454704 TESK2Q96S53 571 aa14.09□□□□□ -0.15
GTF3C2-206ENST00000454704 NPC1L1Q9UHC9 1359 aa14.09□□□□□ -0.15
GTF3C2-206ENST00000454704 ADGRL3Q9HAR2 1447 aa14.08□□□□□ -0.16
GTF3C2-206ENST00000454704 MYOM1P52179 1685 aa14.06□□□□□ -0.16
GTF3C2-206ENST00000454704 CCDC136Q96JN2 1154 aa14.06□□□□□ -0.16
GTF3C2-206ENST00000454704 AFF2P51816 1311 aa14.05□□□□□ -0.16
GTF3C2-206ENST00000454704 RXRBP28702 533 aa14.05□□□□□ -0.16
GTF3C2-206ENST00000454704 B4GALNT3Q6L9W6 998 aa14.05□□□□□ -0.16
GTF3C2-206ENST00000454704 ERICH6Q7L0X2 663 aa14.05□□□□□ -0.16
GTF3C2-206ENST00000454704 DDX17Q92841 729 aaKnown RBP14.05□□□□□ -0.16
GTF3C2-206ENST00000454704 UPF1Q92900 1129 aaKnown RBP eCLIP14.05□□□□□ -0.16
GTF3C2-206ENST00000454704 NBPF1Q3BBV0 1214 aa14.04□□□□□ -0.16
GTF3C2-206ENST00000454704 PIK3C2GO75747 1445 aa14.03□□□□□ -0.16
GTF3C2-206ENST00000454704 CDK12Q9NYV4 1490 aaPredicted RBP14.03□□□□□ -0.16
GTF3C2-206ENST00000454704 PNPLA6Q8IY17 1366 aa14.03□□□□□ -0.16
GTF3C2-206ENST00000454704 RRP1P56182 461 aaKnown RBP14.03□□□□□ -0.16
GTF3C2-206ENST00000454704 RGL3Q3MIN7 710 aa14.03□□□□□ -0.16
GTF3C2-206ENST00000454704 LRRC59Q96AG4 307 aaKnown RBP14.02□□□□□ -0.16
GTF3C2-206ENST00000454704 PTCH1Q13635 1447 aa14.02□□□□□ -0.17
GTF3C2-206ENST00000454704 C8orf37Q96NL8 207 aa14.01□□□□□ -0.17
GTF3C2-206ENST00000454704 C1orf167Q5SNV9 1468 aa14.01□□□□□ -0.17
GTF3C2-206ENST00000454704 SBNO2Q9Y2G9 1366 aa14□□□□□ -0.17
GTF3C2-206ENST00000454704 RCAN3Q9UKA8 241 aa14□□□□□ -0.17
GTF3C2-206ENST00000454704 ROBO2Q9HCK4 1378 aa14□□□□□ -0.17
GTF3C2-206ENST00000454704 RGS12O14924 1447 aa13.99□□□□□ -0.17
GTF3C2-206ENST00000454704 NGEFQ8N5V2 710 aa13.99□□□□□ -0.17
GTF3C2-206ENST00000454704 NRXN1Q9ULB1 1477 aa13.99□□□□□ -0.17
GTF3C2-206ENST00000454704 PANK3Q9H999 370 aa13.98□□□□□ -0.17
GTF3C2-206ENST00000454704 PPLO60437 1756 aa13.97□□□□□ -0.17
GTF3C2-206ENST00000454704 ADAMTS2O95450 1211 aa13.97□□□□□ -0.17
GTF3C2-206ENST00000454704 TCERG1O14776 1098 aaKnown RBP13.96□□□□□ -0.18
GTF3C2-206ENST00000454704 VGFO15240 615 aaPredicted RBP13.96□□□□□ -0.18
GTF3C2-206ENST00000454704 MSH5O43196 834 aa13.96□□□□□ -0.18
GTF3C2-206ENST00000454704 ORAI2Q96SN7 254 aa13.96□□□□□ -0.18
GTF3C2-206ENST00000454704 QTRT2Q9H974 415 aaKnown RBP13.96□□□□□ -0.18
GTF3C2-206ENST00000454704 KNSTRNQ9Y448 316 aa13.96□□□□□ -0.18
GTF3C2-206ENST00000454704 USP32Q8NFA0 1604 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms