RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 SLC10A3P09131 477 aa9.53□□□□□ -0.88
CDH19-202ENST00000454642 SWT1Q5T5J6 900 aaKnown RBP9.53□□□□□ -0.88
CDH19-202ENST00000454642 RSPH4AQ5TD94 716 aa9.53□□□□□ -0.88
CDH19-202ENST00000454642 DMRTA1Q5VZB9 504 aa9.53□□□□□ -0.88
CDH19-202ENST00000454642 GLMNQ92990 594 aa9.53□□□□□ -0.88
CDH19-202ENST00000454642 SEPT9Q9UHD8 586 aaPredicted RBP9.53□□□□□ -0.88
CDH19-202ENST00000454642 PCDHGC3Q9UN70 934 aa9.53□□□□□ -0.88
CDH19-202ENST00000454642 HRO43593 1189 aa9.52□□□□□ -0.89
CDH19-202ENST00000454642 PRPF38BQ5VTL8 546 aaKnown RBP9.52□□□□□ -0.89
CDH19-202ENST00000454642 ZBED2Q9BTP6 218 aa9.51□□□□□ -0.89
CDH19-202ENST00000454642 USP46P62068 366 aa9.51□□□□□ -0.89
CDH19-202ENST00000454642 CTDSPL2Q05D32 466 aa9.51□□□□□ -0.89
CDH19-202ENST00000454642 HMX1Q9NP08 348 aaPredicted RBP9.51□□□□□ -0.89
CDH19-202ENST00000454642 GJD4Q96KN9 370 aaPredicted RBP9.49□□□□□ -0.89
CDH19-202ENST00000454642 RETREG2Q8NC44 543 aa9.48□□□□□ -0.89
CDH19-202ENST00000454642 NDUFB9Q9Y6M9 179 aa9.48□□□□□ -0.89
CDH19-202ENST00000454642 SOCS7O14512 581 aa9.48□□□□□ -0.89
CDH19-202ENST00000454642 MTMR2Q13614 643 aa9.48□□□□□ -0.89
CDH19-202ENST00000454642 LRRN4Q8WUT4 740 aa9.47□□□□□ -0.89
CDH19-202ENST00000454642 C6orf229H3BNL8 230 aa9.46□□□□□ -0.89
CDH19-202ENST00000454642 RNF40O75150 1001 aa9.46□□□□□ -0.89
CDH19-202ENST00000454642 HDGFP51858 240 aaKnown RBP9.46□□□□□ -0.89
CDH19-202ENST00000454642 FUT2Q10981 343 aa9.46□□□□□ -0.89
CDH19-202ENST00000454642 IRF5Q13568 498 aa9.46□□□□□ -0.89
CDH19-202ENST00000454642 AEBP1Q8IUX7 1158 aa9.46□□□□□ -0.89
CDH19-202ENST00000454642 RABGEF1Q9UJ41 708 aa9.46□□□□□ -0.89
CDH19-202ENST00000454642 HDGFL1Q5TGJ6 251 aa9.45□□□□□ -0.9
CDH19-202ENST00000454642 HELBQ8NG08 1087 aaPredicted RBP9.45□□□□□ -0.9
CDH19-202ENST00000454642 HCSTQ9UBK5 93 aa9.45□□□□□ -0.9
CDH19-202ENST00000454642 CCDC180Q9P1Z9 1646 aa9.45□□□□□ -0.9
CDH19-202ENST00000454642 CFAP99D6REC4 459 aa9.45□□□□□ -0.9
CDH19-202ENST00000454642 SYMPKQ92797 1274 aaKnown RBP9.45□□□□□ -0.9
CDH19-202ENST00000454642 TRAIPQ9BWF2 469 aa9.45□□□□□ -0.9
CDH19-202ENST00000454642 SLC4A5Q9BY07 1137 aa9.44□□□□□ -0.9
CDH19-202ENST00000454642 TRIM34Q9BYJ4 488 aa9.44□□□□□ -0.9
CDH19-202ENST00000454642 CFHP08603 1231 aa9.43□□□□□ -0.9
CDH19-202ENST00000454642 RFX1P22670 979 aa9.43□□□□□ -0.9
CDH19-202ENST00000454642 VAC14Q08AM6 782 aa9.43□□□□□ -0.9
CDH19-202ENST00000454642 SAMD7Q7Z3H4 446 aa9.43□□□□□ -0.9
CDH19-202ENST00000454642 ADAMTS19Q8TE59 1207 aa9.43□□□□□ -0.9
CDH19-202ENST00000454642 EPS8L1Q8TE68 723 aa9.43□□□□□ -0.9
CDH19-202ENST00000454642 SLC4A3P48751 1232 aa9.42□□□□□ -0.9
CDH19-202ENST00000454642 VPS9D1Q9Y2B5 631 aa9.42□□□□□ -0.9
CDH19-202ENST00000454642 GPR37L1O60883 481 aa9.42□□□□□ -0.9
CDH19-202ENST00000454642 FAM98CQ17RN3 349 aaKnown RBP9.42□□□□□ -0.9
CDH19-202ENST00000454642 GRIPAP1Q4V328 841 aa9.41□□□□□ -0.9
CDH19-202ENST00000454642 ACIN1Q9UKV3 1341 aaKnown RBP9.4□□□□□ -0.9
CDH19-202ENST00000454642 SLF2Q8IX21 1173 aa9.4□□□□□ -0.9
CDH19-202ENST00000454642 CCDC9Q9Y3X0 531 aaKnown RBP9.4□□□□□ -0.9
CDH19-202ENST00000454642 ABCC9O60706 1549 aa9.39□□□□□ -0.91
CDH19-202ENST00000454642 RANGAP1P46060 587 aaPredicted RBP9.39□□□□□ -0.91
CDH19-202ENST00000454642 WASHC4Q2M389 1173 aa9.39□□□□□ -0.91
CDH19-202ENST00000454642 NPM2Q86SE8 214 aaKnown RBP9.39□□□□□ -0.91
CDH19-202ENST00000454642 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.39□□□□□ -0.91
CDH19-202ENST00000454642 PPP1R15AO75807 674 aaPredicted RBP9.39□□□□□ -0.91
CDH19-202ENST00000454642 KCTD17Q8N5Z5 321 aa9.39□□□□□ -0.91
CDH19-202ENST00000454642 ATP6V1AP38606 617 aa9.38□□□□□ -0.91
CDH19-202ENST00000454642 NR6A1Q15406 480 aa9.38□□□□□ -0.91
CDH19-202ENST00000454642 BHMG1C9JSJ3 638 aaPredicted RBP9.37□□□□□ -0.91
CDH19-202ENST00000454642 PRR7Q8TB68 274 aa9.37□□□□□ -0.91
CDH19-202ENST00000454642 PER1O15534 1290 aaPredicted RBP9.36□□□□□ -0.91
CDH19-202ENST00000454642 PUS10Q3MIT2 529 aaKnown RBP9.36□□□□□ -0.91
CDH19-202ENST00000454642 PLA2G2EQ9NZK7 142 aa9.36□□□□□ -0.91
CDH19-202ENST00000454642 KCTD12Q96CX2 325 aaKnown RBP9.36□□□□□ -0.91
CDH19-202ENST00000454642 CFAP70Q5T0N1 1121 aa9.35□□□□□ -0.91
CDH19-202ENST00000454642 PBXIP1Q96AQ6 731 aa9.35□□□□□ -0.91
CDH19-202ENST00000454642 STAC3Q96MF2 364 aa9.35□□□□□ -0.91
CDH19-202ENST00000454642 PPP1R12CQ9BZL4 782 aa9.34□□□□□ -0.91
CDH19-202ENST00000454642 ZFRQ96KR1 1074 aaKnown RBP9.33□□□□□ -0.92
CDH19-202ENST00000454642 NBPF3Q9H094 633 aa9.33□□□□□ -0.92
CDH19-202ENST00000454642 KMT5BQ4FZB7 885 aa9.32□□□□□ -0.92
CDH19-202ENST00000454642 ALG2Q9H553 416 aa9.32□□□□□ -0.92
CDH19-202ENST00000454642 SLC27A5Q9Y2P5 690 aa9.32□□□□□ -0.92
CDH19-202ENST00000454642 CARNS1A5YM72 827 aa9.32□□□□□ -0.92
CDH19-202ENST00000454642 PALM3A6NDB9 673 aaPredicted RBP9.32□□□□□ -0.92
CDH19-202ENST00000454642 LMOD1P29536 600 aaPredicted RBP9.32□□□□□ -0.92
CDH19-202ENST00000454642 LAPTM4BQ86VI4 370 aa9.31□□□□□ -0.92
CDH19-202ENST00000454642 CDCA8Q53HL2 280 aa9.3□□□□□ -0.92
CDH19-202ENST00000454642 MORN1Q5T089 497 aa9.3□□□□□ -0.92
CDH19-202ENST00000454642 RETREG3Q86VR2 466 aa9.3□□□□□ -0.92
CDH19-202ENST00000454642 TFIP11Q9UBB9 837 aaKnown RBP9.3□□□□□ -0.92
CDH19-202ENST00000454642 SEMA3FQ13275 785 aa9.29□□□□□ -0.92
CDH19-202ENST00000454642 UCN2Q96RP3 112 aa9.29□□□□□ -0.92
CDH19-202ENST00000454642 GZF1Q9H116 711 aaPredicted RBP9.29□□□□□ -0.92
CDH19-202ENST00000454642 MRPL50Q8N5N7 158 aaKnown RBP9.29□□□□□ -0.92
CDH19-202ENST00000454642 CSB-PGBD3P0DP91 1061 aa9.28□□□□□ -0.92
CDH19-202ENST00000454642 THSD4Q6ZMP0 1018 aa9.28□□□□□ -0.92
CDH19-202ENST00000454642 LRCH3Q96II8 777 aa9.28□□□□□ -0.92
CDH19-202ENST00000454642 RNF19BQ6ZMZ0 732 aa9.27□□□□□ -0.93
CDH19-202ENST00000454642 ACTN4O43707 911 aaKnown RBP9.26□□□□□ -0.93
CDH19-202ENST00000454642 SRPK2P78362 688 aaKnown RBP9.26□□□□□ -0.93
CDH19-202ENST00000454642 Q3C1V9 767 aa9.26□□□□□ -0.93
CDH19-202ENST00000454642 BLOC1S3Q6QNY0 202 aa9.26□□□□□ -0.93
CDH19-202ENST00000454642 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.26□□□□□ -0.93
CDH19-202ENST00000454642 PDE4CQ08493 712 aa9.26□□□□□ -0.93
CDH19-202ENST00000454642 PNMA1Q8ND90 353 aa9.26□□□□□ -0.93
CDH19-202ENST00000454642 SOX11P35716 441 aa9.24□□□□□ -0.93
CDH19-202ENST00000454642 PTPN5P54829 565 aa9.24□□□□□ -0.93
CDH19-202ENST00000454642 TMCO4Q5TGY1 634 aa9.24□□□□□ -0.93
CDH19-202ENST00000454642 DESI1Q6ICB0 168 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms