RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ATP1B4Q9UN42 357 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P27-201ENST00000431429 NUTM2BA6NNL0 878 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P27-201ENST00000431429 NUTM2EB1AL46 878 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P27-201ENST00000431429 HDGFP51858 240 aaKnown RBP6.05□□□□□ -1.44
HMGB1P27-201ENST00000431429 CTDSPL2Q05D32 466 aa6.05□□□□□ -1.44
HMGB1P27-201ENST00000431429 GRIPAP1Q4V328 841 aa6.05□□□□□ -1.44
HMGB1P27-201ENST00000431429 NUTM2DQ5VT03 806 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P27-201ENST00000431429 NUTM2AQ8IVF1 878 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P27-201ENST00000431429 DESI1Q6ICB0 168 aa6.04□□□□□ -1.44
HMGB1P27-201ENST00000431429 ARID3AQ99856 593 aa6.04□□□□□ -1.44
HMGB1P27-201ENST00000431429 SERPINA10Q9UK55 444 aa6.04□□□□□ -1.44
HMGB1P27-201ENST00000431429 ZNF330Q9Y3S2 320 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P27-201ENST00000431429 NDUFB9Q9Y6M9 179 aa6.04□□□□□ -1.44
HMGB1P27-201ENST00000431429 SLC4A3P48751 1232 aa6.03□□□□□ -1.44
HMGB1P27-201ENST00000431429 KMT5BQ4FZB7 885 aa6.03□□□□□ -1.44
HMGB1P27-201ENST00000431429 MRPL50Q8N5N7 158 aaKnown RBP6.03□□□□□ -1.44
HMGB1P27-201ENST00000431429 NECTIN2Q92692 538 aa6.03□□□□□ -1.44
HMGB1P27-201ENST00000431429 SALL2Q9Y467 1007 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P27-201ENST00000431429 POM121CA8CG34 1229 aa6.02□□□□□ -1.45
HMGB1P27-201ENST00000431429 RETREG3Q86VR2 466 aa6.02□□□□□ -1.45
HMGB1P27-201ENST00000431429 HELBQ8NG08 1087 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P27-201ENST00000431429 ADAMTS19Q8TE59 1207 aa6.02□□□□□ -1.45
HMGB1P27-201ENST00000431429 LRRN4Q8WUT4 740 aa6.02□□□□□ -1.45
HMGB1P27-201ENST00000431429 LRCH3Q96II8 777 aa6.02□□□□□ -1.45
HMGB1P27-201ENST00000431429 SLC27A5Q9Y2P5 690 aa6.02□□□□□ -1.45
HMGB1P27-201ENST00000431429 SOWAHBA6NEL2 793 aa6.01□□□□□ -1.45
HMGB1P27-201ENST00000431429 ABL2P42684 1182 aa6.01□□□□□ -1.45
HMGB1P27-201ENST00000431429 PRR7Q8TB68 274 aa6.01□□□□□ -1.45
HMGB1P27-201ENST00000431429 SYMPKQ92797 1274 aaKnown RBP6.01□□□□□ -1.45
HMGB1P27-201ENST00000431429 THAP11Q96EK4 314 aa6.01□□□□□ -1.45
HMGB1P27-201ENST00000431429 PRM3Q9NNZ6 103 aa6.01□□□□□ -1.45
HMGB1P27-201ENST00000431429 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P27-201ENST00000431429 C6orf229H3BNL8 230 aa6□□□□□ -1.45
HMGB1P27-201ENST00000431429 PER1O15534 1290 aaPredicted RBP6□□□□□ -1.45
HMGB1P27-201ENST00000431429 EPS8L1Q8TE68 723 aa6□□□□□ -1.45
HMGB1P27-201ENST00000431429 FAM163AQ96GL9 167 aaPredicted RBP6□□□□□ -1.45
HMGB1P27-201ENST00000431429 APLP1P51693 650 aa5.99□□□□□ -1.45
HMGB1P27-201ENST00000431429 PUS10Q3MIT2 529 aaKnown RBP5.99□□□□□ -1.45
HMGB1P27-201ENST00000431429 BRICD5Q6PL45 260 aa5.99□□□□□ -1.45
HMGB1P27-201ENST00000431429 RNF19BQ6ZMZ0 732 aa5.99□□□□□ -1.45
HMGB1P27-201ENST00000431429 GLMNQ92990 594 aa5.99□□□□□ -1.45
HMGB1P27-201ENST00000431429 PRR14Q9BWN1 585 aa5.99□□□□□ -1.45
HMGB1P27-201ENST00000431429 WASHC4Q2M389 1173 aa5.98□□□□□ -1.45
HMGB1P27-201ENST00000431429 Q3C1V9 767 aa5.98□□□□□ -1.45
HMGB1P27-201ENST00000431429 BLOC1S3Q6QNY0 202 aa5.98□□□□□ -1.45
HMGB1P27-201ENST00000431429 LYPD8Q6UX82 237 aa5.98□□□□□ -1.45
HMGB1P27-201ENST00000431429 WWC1Q8IX03 1113 aa5.98□□□□□ -1.45
HMGB1P27-201ENST00000431429 ANKK1Q8NFD2 765 aa5.98□□□□□ -1.45
HMGB1P27-201ENST00000431429 CCDC97Q96F63 343 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P27-201ENST00000431429 KRTAP3-3Q9BYR6 98 aa5.98□□□□□ -1.45
HMGB1P27-201ENST00000431429 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
HMGB1P27-201ENST00000431429 ALG2Q9H553 416 aa5.98□□□□□ -1.45
HMGB1P27-201ENST00000431429 RNF40O75150 1001 aa5.97□□□□□ -1.45
HMGB1P27-201ENST00000431429 F12P00748 615 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P27-201ENST00000431429 SRPK2P78362 688 aaKnown RBP5.97□□□□□ -1.45
HMGB1P27-201ENST00000431429 TSR3Q9UJK0 312 aaKnown RBP5.97□□□□□ -1.45
HMGB1P27-201ENST00000431429 BCAMP50895 628 aa5.96□□□□□ -1.46
HMGB1P27-201ENST00000431429 NR6A1Q15406 480 aa5.96□□□□□ -1.46
HMGB1P27-201ENST00000431429 USB1Q9BQ65 265 aaKnown RBP5.96□□□□□ -1.46
HMGB1P27-201ENST00000431429 HPS5Q9UPZ3 1129 aa5.96□□□□□ -1.46
HMGB1P27-201ENST00000431429 SCUBE3Q8IX30 993 aa5.95□□□□□ -1.46
HMGB1P27-201ENST00000431429 CALR3Q96L12 384 aaKnown RBP5.95□□□□□ -1.46
HMGB1P27-201ENST00000431429 PPP1R15AO75807 674 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P27-201ENST00000431429 PPP4CP60510 307 aa5.94□□□□□ -1.46
HMGB1P27-201ENST00000431429 VAC14Q08AM6 782 aa5.94□□□□□ -1.46
HMGB1P27-201ENST00000431429 MSS51Q4VC12 460 aa5.94□□□□□ -1.46
HMGB1P27-201ENST00000431429 CFAP70Q5T0N1 1121 aa5.94□□□□□ -1.46
HMGB1P27-201ENST00000431429 HDGFL1Q5TGJ6 251 aa5.94□□□□□ -1.46
HMGB1P27-201ENST00000431429 UCN2Q96RP3 112 aa5.94□□□□□ -1.46
HMGB1P27-201ENST00000431429 TRAIPQ9BWF2 469 aa5.94□□□□□ -1.46
HMGB1P27-201ENST00000431429 JUNDP17535 347 aa5.93□□□□□ -1.46
HMGB1P27-201ENST00000431429 SOX11P35716 441 aa5.93□□□□□ -1.46
HMGB1P27-201ENST00000431429 TRIM26Q12899 539 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P27-201ENST00000431429 PTPRNQ16849 979 aa5.93□□□□□ -1.46
HMGB1P27-201ENST00000431429 TSC1Q92574 1164 aa5.93□□□□□ -1.46
HMGB1P27-201ENST00000431429 WNT2BQ93097 391 aa5.93□□□□□ -1.46
HMGB1P27-201ENST00000431429 WBP1LQ9NX94 342 aa5.93□□□□□ -1.46
HMGB1P27-201ENST00000431429 PCDHB3Q9Y5E6 796 aa5.93□□□□□ -1.46
HMGB1P27-201ENST00000431429 NR1I2O75469 434 aa5.92□□□□□ -1.46
HMGB1P27-201ENST00000431429 DXOO77932 396 aaKnown RBP5.92□□□□□ -1.46
HMGB1P27-201ENST00000431429 FMNL1O95466 1100 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P27-201ENST00000431429 MMP16P51512 607 aa5.92□□□□□ -1.46
HMGB1P27-201ENST00000431429 THSD4Q6ZMP0 1018 aa5.92□□□□□ -1.46
HMGB1P27-201ENST00000431429 ANKRD13DQ6ZTN6 518 aa5.92□□□□□ -1.46
HMGB1P27-201ENST00000431429 FAM160A2Q8N612 972 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P27-201ENST00000431429 ZC3H4Q9UPT8 1303 aaKnown RBP5.92□□□□□ -1.46
HMGB1P27-201ENST00000431429 POTEMA6NI47 508 aa5.91□□□□□ -1.46
HMGB1P27-201ENST00000431429 PPP1R12CQ9BZL4 782 aa5.91□□□□□ -1.46
HMGB1P27-201ENST00000431429 GOLGA8CPA6NN73 597 aa5.9□□□□□ -1.46
HMGB1P27-201ENST00000431429 NR1H3Q13133 447 aa5.9□□□□□ -1.46
HMGB1P27-201ENST00000431429 NYAP1Q6ZVC0 841 aa5.9□□□□□ -1.46
HMGB1P27-201ENST00000431429 RETREG2Q8NC44 543 aa5.9□□□□□ -1.46
HMGB1P27-201ENST00000431429 FKBPLQ9UIM3 349 aa5.9□□□□□ -1.46
HMGB1P27-201ENST00000431429 FBXO45P0C2W1 286 aa5.89□□□□□ -1.47
HMGB1P27-201ENST00000431429 PDIA4P13667 645 aaKnown RBP5.89□□□□□ -1.47
HMGB1P27-201ENST00000431429 PBXIP1Q96AQ6 731 aa5.89□□□□□ -1.47
HMGB1P27-201ENST00000431429 OCSTAMPQ9BR26 566 aa5.89□□□□□ -1.47
HMGB1P27-201ENST00000431429 EVA1BQ9NVM1 165 aa5.89□□□□□ -1.47
HMGB1P27-201ENST00000431429 MAP10Q9P2G4 905 aa5.89□□□□□ -1.47
HMGB1P27-201ENST00000431429 PALM3A6NDB9 673 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms