RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 CA8P35219 290 aa5.54□□□□□ -1.52
LRRK2-204ENST00000430804 IGHMBP2P38935 993 aaKnown RBP5.54□□□□□ -1.52
LRRK2-204ENST00000430804 PPP4R3AQ6IN85 833 aa5.54□□□□□ -1.52
LRRK2-204ENST00000430804 BICDL1Q6ZP65 573 aa5.54□□□□□ -1.52
LRRK2-204ENST00000430804 CDCA7Q9BWT1 371 aaPredicted RBP5.54□□□□□ -1.52
LRRK2-204ENST00000430804 KIF15Q9NS87 1388 aa5.54□□□□□ -1.52
LRRK2-204ENST00000430804 ZNF287Q9HBT7 754 aa5.53□□□□□ -1.52
LRRK2-204ENST00000430804 NPHP3Q7Z494 1330 aa5.53□□□□□ -1.52
LRRK2-204ENST00000430804 SLC26A8Q96RN1 970 aa5.53□□□□□ -1.52
LRRK2-204ENST00000430804 CNNM1Q9NRU3 951 aa5.53□□□□□ -1.52
LRRK2-204ENST00000430804 MFAP1P55081 439 aaKnown RBP5.53□□□□□ -1.52
LRRK2-204ENST00000430804 EIF6P56537 245 aaKnown RBP5.53□□□□□ -1.52
LRRK2-204ENST00000430804 FLAD1Q8NFF5 587 aa5.53□□□□□ -1.52
LRRK2-204ENST00000430804 TNIP1Q15025 636 aa5.53□□□□□ -1.52
LRRK2-204ENST00000430804 TEX13AQ9BXU3 409 aaPredicted RBP5.53□□□□□ -1.52
LRRK2-204ENST00000430804 ARHGAP5Q13017 1502 aa5.53□□□□□ -1.52
LRRK2-204ENST00000430804 PDE6BP35913 854 aa5.53□□□□□ -1.52
LRRK2-204ENST00000430804 ODF2Q5BJF6 829 aa5.53□□□□□ -1.52
LRRK2-204ENST00000430804 BRMS1Q9HCU9 246 aa5.53□□□□□ -1.52
LRRK2-204ENST00000430804 HSP90AB3PQ58FF7 597 aa5.52□□□□□ -1.53
LRRK2-204ENST00000430804 RDXP35241 583 aaKnown RBP5.52□□□□□ -1.53
LRRK2-204ENST00000430804 ATP2B2Q01814 1243 aa5.52□□□□□ -1.53
LRRK2-204ENST00000430804 CRACR2BQ8N4Y2 399 aaPredicted RBP5.52□□□□□ -1.53
LRRK2-204ENST00000430804 PLB1Q6P1J6 1458 aa5.52□□□□□ -1.53
LRRK2-204ENST00000430804 XBP1P17861 261 aa5.52□□□□□ -1.53
LRRK2-204ENST00000430804 RAPGEF3O95398 923 aa5.52□□□□□ -1.53
LRRK2-204ENST00000430804 UHRF1BP1Q6BDS2 1440 aa5.52□□□□□ -1.53
LRRK2-204ENST00000430804 AQRO60306 1485 aaKnown RBP eCLIP5.52□□□□□ -1.53
LRRK2-204ENST00000430804 FAM135AQ9P2D6 1515 aa5.51□□□□□ -1.53
LRRK2-204ENST00000430804 FYB1O15117 783 aa5.51□□□□□ -1.53
LRRK2-204ENST00000430804 BRDTQ58F21 947 aaPredicted RBP5.51□□□□□ -1.53
LRRK2-204ENST00000430804 ZNF219Q9P2Y4 722 aaPredicted RBP5.51□□□□□ -1.53
LRRK2-204ENST00000430804 TRIM6-TRIM34B2RNG4 842 aa5.51□□□□□ -1.53
LRRK2-204ENST00000430804 SPRYD3Q8NCJ5 442 aa5.51□□□□□ -1.53
LRRK2-204ENST00000430804 RUFY2Q8WXA3 655 aa5.51□□□□□ -1.53
LRRK2-204ENST00000430804 CCDC87Q9NVE4 849 aa5.51□□□□□ -1.53
LRRK2-204ENST00000430804 RRP7AQ9Y3A4 280 aaKnown RBP5.51□□□□□ -1.53
LRRK2-204ENST00000430804 PLIN1O60240 522 aa5.51□□□□□ -1.53
LRRK2-204ENST00000430804 VSIG10Q8N0Z9 540 aa5.51□□□□□ -1.53
LRRK2-204ENST00000430804 TCERG1O14776 1098 aaKnown RBP5.51□□□□□ -1.53
LRRK2-204ENST00000430804 DIAPH1O60610 1272 aaKnown RBP5.51□□□□□ -1.53
LRRK2-204ENST00000430804 FHOD3Q2V2M9 1422 aa5.51□□□□□ -1.53
LRRK2-204ENST00000430804 SYNJ1O43426 1573 aa5.51□□□□□ -1.53
LRRK2-204ENST00000430804 IFIT2P09913 472 aaKnown RBP5.51□□□□□ -1.53
LRRK2-204ENST00000430804 WASHC4Q2M389 1173 aa5.51□□□□□ -1.53
LRRK2-204ENST00000430804 EHMT1Q9H9B1 1298 aa5.51□□□□□ -1.53
LRRK2-204ENST00000430804 IBSPP21815 317 aaPredicted RBP5.5□□□□□ -1.53
LRRK2-204ENST00000430804 NFXL1Q6ZNB6 911 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 ANKIB1Q9P2G1 1089 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 TNNI2P48788 182 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 DDB1Q16531 1140 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 TSR1Q2NL82 804 aaKnown RBP5.5□□□□□ -1.53
LRRK2-204ENST00000430804 RPGRIP1LQ68CZ1 1315 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 NCAPD3P42695 1498 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 ST20-MTHFSA0A0A6YYL1 179 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 MTHFSP49914 203 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 CHMP4BP1P59074 171 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 ZC3H6P61129 1189 aaKnown RBP5.5□□□□□ -1.53
LRRK2-204ENST00000430804 MROH2BQ7Z745 1585 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 EYA3Q99504 573 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 TRPC5Q9UL62 973 aaPredicted RBP5.5□□□□□ -1.53
LRRK2-204ENST00000430804 TIMELESSQ9UNS1 1208 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 CENPJQ9HC77 1338 aaPredicted RBP5.5□□□□□ -1.53
LRRK2-204ENST00000430804 C6orf229H3BNL8 230 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 TPD52L1Q16890 204 aaPredicted RBP5.5□□□□□ -1.53
LRRK2-204ENST00000430804 CSPP1Q1MSJ5 1256 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 SCAPERQ9BY12 1400 aa5.5□□□□□ -1.53
LRRK2-204ENST00000430804 CT47A1Q5JQC4 288 aaPredicted RBP5.49□□□□□ -1.53
LRRK2-204ENST00000430804 DNAJC2Q99543 621 aaKnown RBP5.49□□□□□ -1.53
LRRK2-204ENST00000430804 FEZ1Q99689 392 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 NACAP1Q9BZK3 213 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 APBA3O96018 575 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 PDE4CQ08493 712 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 SAFBQ15424 915 aaKnown RBP eCLIP5.49□□□□□ -1.53
LRRK2-204ENST00000430804 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.49□□□□□ -1.53
LRRK2-204ENST00000430804 CABP5Q9NP86 173 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 NEBLO76041 1014 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 SF3A1Q15459 793 aaKnown RBP5.49□□□□□ -1.53
LRRK2-204ENST00000430804 CCDC152Q4G0S7 254 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 LRSAM1Q6UWE0 723 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 DDX46Q7L014 1031 aaKnown RBP5.49□□□□□ -1.53
LRRK2-204ENST00000430804 KRT28Q7Z3Y7 464 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 TSPYL4Q9UJ04 414 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 USP21Q9UK80 565 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 PHF8Q9UPP1 1060 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 CAVIN4Q5BKX8 364 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 ZNF530Q6P9A1 599 aaPredicted RBP5.49□□□□□ -1.53
LRRK2-204ENST00000430804 ITPRIPQ8IWB1 547 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 SUPT20HQ8NEM7 779 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 DENND4BO75064 1496 aaPredicted RBP5.49□□□□□ -1.53
LRRK2-204ENST00000430804 CPLX1O14810 134 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 HSPA2P54652 639 aa5.49□□□□□ -1.53
LRRK2-204ENST00000430804 AIMP1Q12904 312 aaKnown RBP5.49□□□□□ -1.53
LRRK2-204ENST00000430804 TPRNQ4KMQ1 711 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 ERC1Q8IUD2 1116 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 NEUROD6Q96NK8 337 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 FYCO1Q9BQS8 1478 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 PHF14O94880 888 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 CCDC158Q5M9N0 1113 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 ZSCAN25Q6NSZ9 544 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms