RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 KNSTRNQ9Y448 316 aa30.12■■■□□ 2.41
VSX1-205ENST00000429762 PARD3Q8TEW0 1356 aa30.11■■■□□ 2.41
VSX1-205ENST00000429762 MED14O60244 1454 aa30.11■■■□□ 2.41
VSX1-205ENST00000429762 SRPK2P78362 688 aaKnown RBP30.1■■■□□ 2.41
VSX1-205ENST00000429762 RALBP1Q15311 655 aa30.1■■■□□ 2.41
VSX1-205ENST00000429762 CARD14Q9BXL6 1004 aa30.09■■■□□ 2.41
VSX1-205ENST00000429762 MYBBP1AQ9BQG0 1328 aaKnown RBP30.08■■■□□ 2.41
VSX1-205ENST00000429762 SETD1BQ9UPS6 1966 aaKnown RBP30.08■■■□□ 2.41
VSX1-205ENST00000429762 CPS1P31327 1500 aa30.07■■■□□ 2.4
VSX1-205ENST00000429762 FAM9BQ8IZU0 186 aa30.07■■■□□ 2.4
VSX1-205ENST00000429762 PTPRUQ92729 1446 aa30.06■■■□□ 2.4
VSX1-205ENST00000429762 AMER1Q5JTC6 1135 aaPredicted RBP30.06■■■□□ 2.4
VSX1-205ENST00000429762 TECPR2O15040 1411 aa30.06■■■□□ 2.4
VSX1-205ENST00000429762 ROBO2Q9HCK4 1378 aa30.05■■■□□ 2.4
VSX1-205ENST00000429762 CDK19Q9BWU1 502 aa30.04■■■□□ 2.4
VSX1-205ENST00000429762 PUS7Q96PZ0 661 aaKnown RBP30.02■■■□□ 2.4
VSX1-205ENST00000429762 FAM135BQ49AJ0 1406 aa30■■■□□ 2.39
VSX1-205ENST00000429762 NSD3Q9BZ95 1437 aa30■■■□□ 2.39
VSX1-205ENST00000429762 TBX22Q9Y458 520 aa30■■■□□ 2.39
VSX1-205ENST00000429762 DIP2AQ14689 1571 aa29.99■■■□□ 2.39
VSX1-205ENST00000429762 ANKLE2Q86XL3 938 aa29.98■■■□□ 2.39
VSX1-205ENST00000429762 AMOTL2Q9Y2J4 779 aa29.97■■■□□ 2.39
VSX1-205ENST00000429762 ATAD2Q6PL18 1390 aa29.96■■■□□ 2.39
VSX1-205ENST00000429762 SIRT1Q96EB6 747 aa29.96■■■□□ 2.39
VSX1-205ENST00000429762 BRD4O60885 1362 aaPredicted RBP29.95■■■□□ 2.39
VSX1-205ENST00000429762 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.94■■■□□ 2.38
VSX1-205ENST00000429762 NLRP13Q86W25 1043 aa29.94■■■□□ 2.38
VSX1-205ENST00000429762 ANKRD36BQ8N2N9 1353 aa29.94■■■□□ 2.38
VSX1-205ENST00000429762 HNRNPUQ00839 825 aaKnown RBP eCLIP29.93■■■□□ 2.38
VSX1-205ENST00000429762 WASLO00401 505 aaPredicted RBP29.92■■■□□ 2.38
VSX1-205ENST00000429762 A0A1W2PP64 1363 aa29.91■■■□□ 2.38
VSX1-205ENST00000429762 NPC1L1Q9UHC9 1359 aa29.91■■■□□ 2.38
VSX1-205ENST00000429762 PNISRQ8TF01 805 aaKnown RBP29.89■■■□□ 2.38
VSX1-205ENST00000429762 XRN1Q8IZH2 1706 aaKnown RBP29.89■■■□□ 2.38
VSX1-205ENST00000429762 PPP2R1AP30153 589 aa29.88■■■□□ 2.37
VSX1-205ENST00000429762 CABP1Q9NZU7 370 aa29.88■■■□□ 2.37
VSX1-205ENST00000429762 CD163L1Q9NR16 1453 aa29.88■■■□□ 2.37
VSX1-205ENST00000429762 NINLQ9Y2I6 1382 aa29.88■■■□□ 2.37
VSX1-205ENST00000429762 NCKAP5LQ9HCH0 1330 aa29.87■■■□□ 2.37
VSX1-205ENST00000429762 USP32Q8NFA0 1604 aa29.85■■■□□ 2.37
VSX1-205ENST00000429762 PTCH1Q13635 1447 aa29.85■■■□□ 2.37
VSX1-205ENST00000429762 KCNA6P17658 529 aa29.84■■■□□ 2.37
VSX1-205ENST00000429762 NPHP4O75161 1426 aaPredicted RBP29.83■■■□□ 2.37
VSX1-205ENST00000429762 KDM4FA0A1W2PPD8 638 aa29.83■■■□□ 2.37
VSX1-205ENST00000429762 ADGRB2O60241 1585 aa29.83■■■□□ 2.37
VSX1-205ENST00000429762 SENP3-EIF4A1A0A087X0R7 540 aa29.81■■■□□ 2.36
VSX1-205ENST00000429762 NUDT16Q96DE0 195 aaKnown RBP29.81■■■□□ 2.36
VSX1-205ENST00000429762 TERF2IPQ9NYB0 399 aa29.81■■■□□ 2.36
VSX1-205ENST00000429762 NUTM2FA1L443 756 aa29.81■■■□□ 2.36
VSX1-205ENST00000429762 CGNL1Q0VF96 1302 aa29.81■■■□□ 2.36
VSX1-205ENST00000429762 PPIP5K1Q6PFW1 1433 aa29.8■■■□□ 2.36
VSX1-205ENST00000429762 PRR36Q9H6K5 1346 aa29.8■■■□□ 2.36
VSX1-205ENST00000429762 CHD2O14647 1828 aaKnown RBP29.79■■■□□ 2.36
VSX1-205ENST00000429762 PIK3R4Q99570 1358 aa29.79■■■□□ 2.36
VSX1-205ENST00000429762 TNNT2P45379 298 aaPredicted RBP29.79■■■□□ 2.36
VSX1-205ENST00000429762 HDGFL2Q7Z4V5 671 aaPredicted RBP29.79■■■□□ 2.36
VSX1-205ENST00000429762 MORC1Q86VD1 984 aa29.78■■■□□ 2.36
VSX1-205ENST00000429762 ATP7BP35670 1465 aa29.78■■■□□ 2.36
VSX1-205ENST00000429762 RBM33Q96EV2 1170 aaKnown RBP29.73■■■□□ 2.35
VSX1-205ENST00000429762 HSPA2P54652 639 aa29.72■■■□□ 2.35
VSX1-205ENST00000429762 GGNBP2Q9H3C7 697 aa29.72■■■□□ 2.35
VSX1-205ENST00000429762 SCAF1Q9H7N4 1312 aaKnown RBP29.72■■■□□ 2.35
VSX1-205ENST00000429762 CCDC61Q9Y6R9 512 aa29.72■■■□□ 2.35
VSX1-205ENST00000429762 CDC42BPGQ6DT37 1551 aa29.7■■■□□ 2.35
VSX1-205ENST00000429762 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.7■■■□□ 2.34
VSX1-205ENST00000429762 TOPAZ1Q8N9V7 1692 aa29.7■■■□□ 2.34
VSX1-205ENST00000429762 KIF20BQ96Q89 1820 aa29.69■■■□□ 2.34
VSX1-205ENST00000429762 NSD2O96028 1365 aa29.69■■■□□ 2.34
VSX1-205ENST00000429762 CPSF1Q10570 1443 aaKnown RBP29.68■■■□□ 2.34
VSX1-205ENST00000429762 ITSN1Q15811 1721 aa29.67■■■□□ 2.34
VSX1-205ENST00000429762 FYB1O15117 783 aa29.67■■■□□ 2.34
VSX1-205ENST00000429762 GTF3C3Q9Y5Q9 886 aa29.67■■■□□ 2.34
VSX1-205ENST00000429762 NALCNQ8IZF0 1738 aa29.66■■■□□ 2.34
VSX1-205ENST00000429762 ANKRD26Q9UPS8 1709 aa29.66■■■□□ 2.34
VSX1-205ENST00000429762 RGPD8O14715 1765 aaPredicted RBP29.65■■■□□ 2.34
VSX1-205ENST00000429762 AKAP12Q02952 1782 aa29.65■■■□□ 2.34
VSX1-205ENST00000429762 NKTRP30414 1462 aaKnown RBP29.65■■■□□ 2.34
VSX1-205ENST00000429762 MON2Q7Z3U7 1717 aa29.64■■■□□ 2.33
VSX1-205ENST00000429762 ZBED9Q6R2W3 1325 aa29.63■■■□□ 2.33
VSX1-205ENST00000429762 ADAMTS8Q9UP79 889 aa29.6■■■□□ 2.33
VSX1-205ENST00000429762 EDC4Q6P2E9 1401 aaKnown RBP29.6■■■□□ 2.33
VSX1-205ENST00000429762 WDR43Q15061 677 aaKnown RBP eCLIP29.59■■■□□ 2.33
VSX1-205ENST00000429762 FMN2Q9NZ56 1722 aa29.59■■■□□ 2.33
VSX1-205ENST00000429762 ACEP12821 1306 aa29.59■■■□□ 2.33
VSX1-205ENST00000429762 NME9Q86XW9 330 aa29.58■■■□□ 2.33
VSX1-205ENST00000429762 PMFBP1Q8TBY8 1022 aa29.58■■■□□ 2.33
VSX1-205ENST00000429762 NWD1Q149M9 1564 aa29.58■■■□□ 2.33
VSX1-205ENST00000429762 LMTK3Q96Q04 1460 aa29.58■■■□□ 2.33
VSX1-205ENST00000429762 MTHFSP49914 203 aa29.57■■■□□ 2.32
VSX1-205ENST00000429762 ZRANB1Q9UGI0 708 aa29.57■■■□□ 2.32
VSX1-205ENST00000429762 BLMP54132 1417 aaPredicted RBP29.56■■■□□ 2.32
VSX1-205ENST00000429762 PLEKHG3A1L390 1219 aa29.55■■■□□ 2.32
VSX1-205ENST00000429762 SALL2Q9Y467 1007 aaPredicted RBP29.55■■■□□ 2.32
VSX1-205ENST00000429762 POLR3AO14802 1390 aaPredicted RBP29.54■■■□□ 2.32
VSX1-205ENST00000429762 SHPRHQ149N8 1683 aa29.52■■■□□ 2.32
VSX1-205ENST00000429762 NRKQ7Z2Y5 1582 aa29.52■■■□□ 2.32
VSX1-205ENST00000429762 FBLN1P23142 703 aa29.52■■■□□ 2.32
VSX1-205ENST00000429762 C14orf37Q86TY3 774 aa29.52■■■□□ 2.32
VSX1-205ENST00000429762 ADGRL3Q9HAR2 1447 aa29.51■■■□□ 2.31
VSX1-205ENST00000429762 ZNF692Q9BU19 519 aaPredicted RBP29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms