RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 CNTLNQ9NXG0 1405 aa5.53□□□□□ -1.52
R3HDM1-206ENST00000429703 PTMAP06454 111 aaKnown RBP5.52□□□□□ -1.53
R3HDM1-206ENST00000429703 MPNDQ8N594 471 aa5.52□□□□□ -1.53
R3HDM1-206ENST00000429703 DISP1Q96F81 1524 aa5.52□□□□□ -1.53
R3HDM1-206ENST00000429703 SLFN14P0C7P3 912 aa5.52□□□□□ -1.53
R3HDM1-206ENST00000429703 TNNT2P45379 298 aaPredicted RBP5.52□□□□□ -1.53
R3HDM1-206ENST00000429703 NOP2P46087 812 aaKnown RBP5.52□□□□□ -1.53
R3HDM1-206ENST00000429703 RASEFQ8IZ41 740 aa5.52□□□□□ -1.53
R3HDM1-206ENST00000429703 TSC1Q92574 1164 aa5.52□□□□□ -1.53
R3HDM1-206ENST00000429703 GZF1Q9H116 711 aaPredicted RBP5.52□□□□□ -1.53
R3HDM1-206ENST00000429703 ZCCHC11Q5TAX3 1644 aaKnown RBP5.52□□□□□ -1.53
R3HDM1-206ENST00000429703 RAB3GAP2Q9H2M9 1393 aa5.52□□□□□ -1.53
R3HDM1-206ENST00000429703 TSGA10IPQ3SY00 556 aa5.52□□□□□ -1.53
R3HDM1-206ENST00000429703 KIF21BO75037 1637 aa5.51□□□□□ -1.53
R3HDM1-206ENST00000429703 APPP05067 770 aa5.51□□□□□ -1.53
R3HDM1-206ENST00000429703 PYGBP11216 843 aa5.51□□□□□ -1.53
R3HDM1-206ENST00000429703 GTF2F1P35269 517 aaKnown RBP eCLIP5.51□□□□□ -1.53
R3HDM1-206ENST00000429703 MNX1P50219 401 aaPredicted RBP5.51□□□□□ -1.53
R3HDM1-206ENST00000429703 NBPF20Q3BBV1 942 aa5.51□□□□□ -1.53
R3HDM1-206ENST00000429703 IGF1RP08069 1367 aa5.51□□□□□ -1.53
R3HDM1-206ENST00000429703 MCM4P33991 863 aa5.51□□□□□ -1.53
R3HDM1-206ENST00000429703 RRP1P56182 461 aaKnown RBP5.51□□□□□ -1.53
R3HDM1-206ENST00000429703 XPCQ01831 940 aaPredicted RBP5.51□□□□□ -1.53
R3HDM1-206ENST00000429703 NEUROD2Q15784 382 aa5.51□□□□□ -1.53
R3HDM1-206ENST00000429703 PRDM16Q9HAZ2 1276 aa5.51□□□□□ -1.53
R3HDM1-206ENST00000429703 CREBZFQ9NS37 354 aa5.51□□□□□ -1.53
R3HDM1-206ENST00000429703 FEZ2Q9UHY8 353 aaPredicted RBP5.51□□□□□ -1.53
R3HDM1-206ENST00000429703 RNF217Q8TC41 542 aa5.5□□□□□ -1.53
R3HDM1-206ENST00000429703 ZC3H15Q8WU90 426 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-206ENST00000429703 CC2D1BQ5T0F9 858 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-206ENST00000429703 NFATC2IPQ8NCF5 419 aa5.5□□□□□ -1.53
R3HDM1-206ENST00000429703 NOL7Q9UMY1 257 aaKnown RBP5.5□□□□□ -1.53
R3HDM1-206ENST00000429703 PRXQ9BXM0 1461 aa5.5□□□□□ -1.53
R3HDM1-206ENST00000429703 RGL3Q3MIN7 710 aa5.49□□□□□ -1.53
R3HDM1-206ENST00000429703 SASS6Q6UVJ0 657 aa5.49□□□□□ -1.53
R3HDM1-206ENST00000429703 PLCD4Q9BRC7 762 aa5.49□□□□□ -1.53
R3HDM1-206ENST00000429703 PRKRIP1Q9H875 184 aaPredicted RBP5.49□□□□□ -1.53
R3HDM1-206ENST00000429703 PRG4Q92954 1404 aaPredicted RBP5.49□□□□□ -1.53
R3HDM1-206ENST00000429703 TRAK2O60296 914 aa5.49□□□□□ -1.53
R3HDM1-206ENST00000429703 FAM9BQ8IZU0 186 aa5.49□□□□□ -1.53
R3HDM1-206ENST00000429703 CEP120Q8N960 986 aa5.49□□□□□ -1.53
R3HDM1-206ENST00000429703 MYRIPQ8NFW9 859 aa5.49□□□□□ -1.53
R3HDM1-206ENST00000429703 SGSM3Q96HU1 749 aa5.49□□□□□ -1.53
R3HDM1-206ENST00000429703 ISY1Q9ULR0 285 aaKnown RBP5.49□□□□□ -1.53
R3HDM1-206ENST00000429703 RTEL1-TNFRSF6BF6WH68 1400 aa5.49□□□□□ -1.53
R3HDM1-206ENST00000429703 EFCC1Q9HA90 598 aa5.49□□□□□ -1.53
R3HDM1-206ENST00000429703 PLB1Q6P1J6 1458 aa5.49□□□□□ -1.53
R3HDM1-206ENST00000429703 MAP3K1Q13233 1512 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 CCDC189A1A4V9 331 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 CLSTN1O94985 981 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 FAM161AQ3B820 660 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 SLC24A3Q9HC58 644 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 ABCA9Q8IUA7 1624 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 CCDC173Q0VFZ6 552 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 NBPF1Q3BBV0 1214 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 C20orf194Q5TEA3 1177 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 BANK1Q8NDB2 785 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 PDLIM2Q96JY6 352 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 SLKQ9H2G2 1235 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 MAGI3Q5TCQ9 1506 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 RAPGEF2Q9Y4G8 1499 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 SEC24BO95487 1268 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 UBTFP17480 764 aaKnown RBP5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 FBXO41Q8TF61 875 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 CHMP7Q8WUX9 453 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 TRIM44Q96DX7 344 aaPredicted RBP5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 CFAP74Q9C0B2 1584 aa5.48□□□□□ -1.53
R3HDM1-206ENST00000429703 KTN1Q86UP2 1357 aaKnown RBP5.47□□□□□ -1.53
R3HDM1-206ENST00000429703 NCOA3Q9Y6Q9 1424 aa5.47□□□□□ -1.53
R3HDM1-206ENST00000429703 INHBEP58166 350 aa5.47□□□□□ -1.53
R3HDM1-206ENST00000429703 CEP83Q9Y592 693 aa5.47□□□□□ -1.53
R3HDM1-206ENST00000429703 KDM6BO15054 1643 aa5.47□□□□□ -1.53
R3HDM1-206ENST00000429703 RAD50Q92878 1312 aa5.47□□□□□ -1.53
R3HDM1-206ENST00000429703 KIF16BQ96L93 1317 aa5.47□□□□□ -1.53
R3HDM1-206ENST00000429703 U2AF2P26368 475 aaKnown RBP eCLIP5.46□□□□□ -1.536e-7■■□□□ 13.4
R3HDM1-206ENST00000429703 DDIT3P35638 169 aa5.46□□□□□ -1.53
R3HDM1-206ENST00000429703 ANKRD7Q92527 254 aa5.46□□□□□ -1.53
R3HDM1-206ENST00000429703 TIGD1Q96MW7 591 aa5.46□□□□□ -1.53
R3HDM1-206ENST00000429703 SATB1Q01826 763 aa5.46□□□□□ -1.54
R3HDM1-206ENST00000429703 HS1BP3Q53T59 392 aa5.46□□□□□ -1.54
R3HDM1-206ENST00000429703 FAM177BA6PVY3 158 aa5.46□□□□□ -1.54
R3HDM1-206ENST00000429703 LMOD3Q0VAK6 560 aa5.46□□□□□ -1.54
R3HDM1-206ENST00000429703 DNAJC21Q5F1R6 531 aaKnown RBP5.46□□□□□ -1.54
R3HDM1-206ENST00000429703 DNAJC14Q6Y2X3 702 aaPredicted RBP5.46□□□□□ -1.54
R3HDM1-206ENST00000429703 SPDYE1Q8NFV5 336 aaPredicted RBP5.46□□□□□ -1.54
R3HDM1-206ENST00000429703 NCAPGQ9BPX3 1015 aa5.46□□□□□ -1.54
R3HDM1-206ENST00000429703 EFCAB5A4FU69 1503 aa5.46□□□□□ -1.54
R3HDM1-206ENST00000429703 ARAP3Q8WWN8 1544 aa5.46□□□□□ -1.54
R3HDM1-206ENST00000429703 SCAPERQ9BY12 1400 aa5.46□□□□□ -1.54
R3HDM1-206ENST00000429703 NINLQ9Y2I6 1382 aa5.45□□□□□ -1.54
R3HDM1-206ENST00000429703 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.45□□□□□ -1.54
R3HDM1-206ENST00000429703 NCOA1Q15788 1441 aa5.45□□□□□ -1.54
R3HDM1-206ENST00000429703 ARHGAP31Q2M1Z3 1444 aa5.45□□□□□ -1.54
R3HDM1-206ENST00000429703 DHX16O60231 1041 aaKnown RBP5.45□□□□□ -1.54
R3HDM1-206ENST00000429703 CCDC172P0C7W6 258 aa5.45□□□□□ -1.54
R3HDM1-206ENST00000429703 GABPB1Q06547 395 aaPredicted RBP5.45□□□□□ -1.54
R3HDM1-206ENST00000429703 ARHGEF1Q92888 912 aaKnown RBP5.45□□□□□ -1.54
R3HDM1-206ENST00000429703 EPRSP07814 1512 aaKnown RBP5.45□□□□□ -1.54
R3HDM1-206ENST00000429703 HSP90AB1P08238 724 aaKnown RBP5.45□□□□□ -1.54
R3HDM1-206ENST00000429703 MRS2Q9HD23 443 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms