RNA–Protein interactions for RNA: ENST00000427538.5

VSIG4-203, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

TSL 3

Gene VSIG4, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-203ENST00000427538 PIK3R4Q99570 1358 aa12.65□□□□□ -0.38
VSIG4-203ENST00000427538 CPS1P31327 1500 aa12.64□□□□□ -0.39
VSIG4-203ENST00000427538 STK26Q9P289 416 aa12.64□□□□□ -0.39
VSIG4-203ENST00000427538 DIP2AQ14689 1571 aa12.64□□□□□ -0.39
VSIG4-203ENST00000427538 ADAMTS13Q76LX8 1427 aa12.63□□□□□ -0.39
VSIG4-203ENST00000427538 PAK3O75914 559 aaPredicted RBP12.63□□□□□ -0.39
VSIG4-203ENST00000427538 CLCN6P51797 869 aa12.63□□□□□ -0.39
VSIG4-203ENST00000427538 CFAP70Q5T0N1 1121 aa12.62□□□□□ -0.39
VSIG4-203ENST00000427538 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
VSIG4-203ENST00000427538 L3MBTL2Q969R5 705 aa12.62□□□□□ -0.39
VSIG4-203ENST00000427538 RBM33Q96EV2 1170 aaKnown RBP12.62□□□□□ -0.39
VSIG4-203ENST00000427538 CLSPNQ9HAW4 1339 aa12.62□□□□□ -0.39
VSIG4-203ENST00000427538 SETBP1Q9Y6X0 1596 aa12.61□□□□□ -0.39
VSIG4-203ENST00000427538 MYOM2P54296 1465 aa12.61□□□□□ -0.39
VSIG4-203ENST00000427538 METP08581 1390 aa12.61□□□□□ -0.39
VSIG4-203ENST00000427538 UBAP1LF5GYI3 381 aa12.61□□□□□ -0.39
VSIG4-203ENST00000427538 TOM1O60784 492 aa12.61□□□□□ -0.39
VSIG4-203ENST00000427538 TMEM132EQ6IEE7 984 aa12.61□□□□□ -0.39
VSIG4-203ENST00000427538 C14orf93Q9H972 538 aaKnown RBP12.6□□□□□ -0.39
VSIG4-203ENST00000427538 PIK3C2GO75747 1445 aa12.6□□□□□ -0.39
VSIG4-203ENST00000427538 LTBP4Q8N2S1 1624 aa12.59□□□□□ -0.39
VSIG4-203ENST00000427538 TMEM94Q12767 1356 aa12.59□□□□□ -0.39
VSIG4-203ENST00000427538 PPLO60437 1756 aa12.59□□□□□ -0.39
VSIG4-203ENST00000427538 PLCD3Q8N3E9 789 aa12.59□□□□□ -0.39
VSIG4-203ENST00000427538 ALKQ9UM73 1620 aa12.59□□□□□ -0.39
VSIG4-203ENST00000427538 MSH6P52701 1360 aa12.58□□□□□ -0.4
VSIG4-203ENST00000427538 FBXO41Q8TF61 875 aa12.58□□□□□ -0.4
VSIG4-203ENST00000427538 POGKQ9P215 609 aa12.58□□□□□ -0.4
VSIG4-203ENST00000427538 NKTRP30414 1462 aaKnown RBP12.58□□□□□ -0.4
VSIG4-203ENST00000427538 ATF3P18847 181 aa12.57□□□□□ -0.4
VSIG4-203ENST00000427538 PIP4K2BP78356 416 aa12.57□□□□□ -0.4
VSIG4-203ENST00000427538 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
VSIG4-203ENST00000427538 LRRC7Q96NW7 1537 aa12.57□□□□□ -0.4
VSIG4-203ENST00000427538 TRAK1Q9UPV9 953 aa12.56□□□□□ -0.4
VSIG4-203ENST00000427538 IQSEC2Q5JU85 1478 aa12.56□□□□□ -0.4
VSIG4-203ENST00000427538 PTPRUQ92729 1446 aa12.55□□□□□ -0.4
VSIG4-203ENST00000427538 C19orf44Q9H6X5 657 aa12.55□□□□□ -0.4
VSIG4-203ENST00000427538 LRPPRCP42704 1394 aaKnown RBP12.55□□□□□ -0.4
VSIG4-203ENST00000427538 NRXN1Q9ULB1 1477 aa12.54□□□□□ -0.4
VSIG4-203ENST00000427538 CADPS2Q86UW7 1296 aa12.54□□□□□ -0.4
VSIG4-203ENST00000427538 TIMELESSQ9UNS1 1208 aa12.54□□□□□ -0.4
VSIG4-203ENST00000427538 NRXN3Q9Y4C0 1643 aa12.54□□□□□ -0.4
VSIG4-203ENST00000427538 YTHDC2Q9H6S0 1430 aaKnown RBP12.54□□□□□ -0.4
VSIG4-203ENST00000427538 NCOA3Q9Y6Q9 1424 aa12.54□□□□□ -0.4
VSIG4-203ENST00000427538 NWD1Q149M9 1564 aa12.53□□□□□ -0.4
VSIG4-203ENST00000427538 SAFB2Q14151 953 aaKnown RBP eCLIP12.53□□□□□ -0.4
VSIG4-203ENST00000427538 IFT172Q9UG01 1749 aa12.53□□□□□ -0.4
VSIG4-203ENST00000427538 ROCK2O75116 1388 aaKnown RBP12.53□□□□□ -0.4
VSIG4-203ENST00000427538 PRAG1Q86YV5 1406 aa12.53□□□□□ -0.4
VSIG4-203ENST00000427538 WAPLQ7Z5K2 1190 aa12.52□□□□□ -0.41
VSIG4-203ENST00000427538 PRAM1Q96QH2 718 aa12.52□□□□□ -0.41
VSIG4-203ENST00000427538 ABCC11Q96J66 1382 aa12.52□□□□□ -0.41
VSIG4-203ENST00000427538 LAMC1P11047 1609 aa12.51□□□□□ -0.41
VSIG4-203ENST00000427538 ZBTB47Q9UFB7 747 aaPredicted RBP12.51□□□□□ -0.41
VSIG4-203ENST00000427538 ROBO2Q9HCK4 1378 aa12.51□□□□□ -0.41
VSIG4-203ENST00000427538 PTCH1Q13635 1447 aa12.51□□□□□ -0.41
VSIG4-203ENST00000427538 CHD2O14647 1828 aaKnown RBP12.51□□□□□ -0.41
VSIG4-203ENST00000427538 NBPF1Q3BBV0 1214 aa12.5□□□□□ -0.41
VSIG4-203ENST00000427538 SIRT1Q96EB6 747 aa12.5□□□□□ -0.41
VSIG4-203ENST00000427538 CARD11Q9BXL7 1154 aa12.5□□□□□ -0.41
VSIG4-203ENST00000427538 STRCP1A6NGW2 1772 aa12.49□□□□□ -0.41
VSIG4-203ENST00000427538 SLAIN2Q9P270 581 aa12.49□□□□□ -0.41
VSIG4-203ENST00000427538 ILDR1Q86SU0 546 aaPredicted RBP12.48□□□□□ -0.41
VSIG4-203ENST00000427538 PHF12Q96QT6 1004 aa12.48□□□□□ -0.41
VSIG4-203ENST00000427538 EIF3AQ14152 1382 aaKnown RBP12.47□□□□□ -0.41
VSIG4-203ENST00000427538 NBPF8Q3BBV2 869 aa12.47□□□□□ -0.41
VSIG4-203ENST00000427538 TSPYL2Q9H2G4 693 aaPredicted RBP12.47□□□□□ -0.41
VSIG4-203ENST00000427538 TECPR2O15040 1411 aa12.46□□□□□ -0.41
VSIG4-203ENST00000427538 FAM135BQ49AJ0 1406 aa12.46□□□□□ -0.41
VSIG4-203ENST00000427538 ADGRL3Q9HAR2 1447 aa12.46□□□□□ -0.41
VSIG4-203ENST00000427538 XRN1Q8IZH2 1706 aaKnown RBP12.46□□□□□ -0.41
VSIG4-203ENST00000427538 MINK1Q8N4C8 1332 aaPredicted RBP12.46□□□□□ -0.41
VSIG4-203ENST00000427538 NUTM2FA1L443 756 aa12.46□□□□□ -0.41
VSIG4-203ENST00000427538 PLEKHH1Q9ULM0 1364 aa12.45□□□□□ -0.42
VSIG4-203ENST00000427538 HIRIP3Q9BW71 556 aaPredicted RBP12.45□□□□□ -0.42
VSIG4-203ENST00000427538 ASXL1Q8IXJ9 1541 aa12.45□□□□□ -0.42
VSIG4-203ENST00000427538 DCCP43146 1447 aa12.45□□□□□ -0.42
VSIG4-203ENST00000427538 CENPJQ9HC77 1338 aaPredicted RBP12.44□□□□□ -0.42
VSIG4-203ENST00000427538 SETD1AO15047 1707 aaKnown RBP12.44□□□□□ -0.42
VSIG4-203ENST00000427538 ADGRB1O14514 1584 aa12.43□□□□□ -0.42
VSIG4-203ENST00000427538 GALR2O43603 387 aaPredicted RBP12.43□□□□□ -0.42
VSIG4-203ENST00000427538 ESCO1Q5FWF5 840 aa12.43□□□□□ -0.42
VSIG4-203ENST00000427538 DLC1Q96QB1 1528 aa12.42□□□□□ -0.42
VSIG4-203ENST00000427538 RASEFQ8IZ41 740 aa12.42□□□□□ -0.42
VSIG4-203ENST00000427538 DCBLD2Q96PD2 775 aa12.42□□□□□ -0.42
VSIG4-203ENST00000427538 POTEIP0CG38 1075 aa12.41□□□□□ -0.42
VSIG4-203ENST00000427538 SRPK2P78362 688 aaKnown RBP12.41□□□□□ -0.42
VSIG4-203ENST00000427538 KIAA1210Q9ULL0 1709 aa12.41□□□□□ -0.42
VSIG4-203ENST00000427538 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
VSIG4-203ENST00000427538 WASLO00401 505 aaPredicted RBP12.4□□□□□ -0.42
VSIG4-203ENST00000427538 RALGAPBQ86X10 1494 aa12.4□□□□□ -0.43
VSIG4-203ENST00000427538 KNDC1Q76NI1 1749 aa12.4□□□□□ -0.43
VSIG4-203ENST00000427538 SLC24A1O60721 1099 aa12.39□□□□□ -0.43
VSIG4-203ENST00000427538 HSPA1LP34931 641 aa12.39□□□□□ -0.43
VSIG4-203ENST00000427538 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.39□□□□□ -0.43
VSIG4-203ENST00000427538 EVC2Q86UK5 1308 aa12.38□□□□□ -0.43
VSIG4-203ENST00000427538 TRPM1Q7Z4N2 1603 aa12.38□□□□□ -0.43
VSIG4-203ENST00000427538 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
VSIG4-203ENST00000427538 BRINP3Q76B58 766 aa12.38□□□□□ -0.43
VSIG4-203ENST00000427538 ORAI2Q96SN7 254 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms