RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 UQCRHLA0A096LP55 91 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 UQCRHP07919 91 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 SEPT10Q9P0V9 454 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 DDX49Q9Y6V7 483 aaKnown RBP9.29□□□□□ -0.92
LINC00649-203ENST00000427447 KIF2AO00139 706 aaPredicted RBP9.29□□□□□ -0.92
LINC00649-203ENST00000427447 CCDC174Q6PII3 467 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 RABEP2Q9H5N1 569 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 IFT57Q9NWB7 429 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 SESN3P58005 492 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 RPUSD2Q8IZ73 545 aaKnown RBP9.29□□□□□ -0.92
LINC00649-203ENST00000427447 SCRIBQ14160 1630 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 FAM160A1Q05DH4 1040 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 HSP90AB4PQ58FF6 505 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 IQCEQ6IPM2 695 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 DYNC1I1O14576 645 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 ZRANB2O95218 330 aaKnown RBP eCLIP9.29□□□□□ -0.92
LINC00649-203ENST00000427447 CCDC92Q53HC0 331 aaPredicted RBP9.29□□□□□ -0.92
LINC00649-203ENST00000427447 RASSF4Q9H2L5 321 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 TRIM35Q9UPQ4 493 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 SMARCC1Q92922 1105 aaPredicted RBP9.28□□□□□ -0.92
LINC00649-203ENST00000427447 NASPP49321 788 aaPredicted RBP9.28□□□□□ -0.92
LINC00649-203ENST00000427447 ERC1Q8IUD2 1116 aa9.28□□□□□ -0.92
LINC00649-203ENST00000427447 MAP9Q49MG5 647 aa9.28□□□□□ -0.92
LINC00649-203ENST00000427447 MAP2K2P36507 400 aa9.28□□□□□ -0.92
LINC00649-203ENST00000427447 KCTD17Q8N5Z5 321 aa9.28□□□□□ -0.92
LINC00649-203ENST00000427447 TMEM132AQ24JP5 1023 aa9.28□□□□□ -0.92
LINC00649-203ENST00000427447 RABGAP1Q9Y3P9 1069 aa9.28□□□□□ -0.92
LINC00649-203ENST00000427447 MIER1Q8N108 512 aa9.28□□□□□ -0.92
LINC00649-203ENST00000427447 SAFB2Q14151 953 aaKnown RBP eCLIP9.28□□□□□ -0.92
LINC00649-203ENST00000427447 CCDC158Q5M9N0 1113 aa9.28□□□□□ -0.92
LINC00649-203ENST00000427447 WHAMMQ8TF30 809 aa9.28□□□□□ -0.92
LINC00649-203ENST00000427447 SH3BP5O60239 455 aa9.27□□□□□ -0.92
LINC00649-203ENST00000427447 HMGB3O15347 200 aaKnown RBP9.27□□□□□ -0.93
LINC00649-203ENST00000427447 KIF5BP33176 963 aa9.27□□□□□ -0.93
LINC00649-203ENST00000427447 RBM33Q96EV2 1170 aaKnown RBP9.27□□□□□ -0.93
LINC00649-203ENST00000427447 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.27□□□□□ -0.934e-6■■■■■ 72.1
LINC00649-203ENST00000427447 SPATS2LQ9NUQ6 558 aaKnown RBP9.27□□□□□ -0.93
LINC00649-203ENST00000427447 CCDC38Q502W7 563 aa9.27□□□□□ -0.93
LINC00649-203ENST00000427447 CCDC50Q8IVM0 306 aa9.27□□□□□ -0.93
LINC00649-203ENST00000427447 FEZ2Q9UHY8 353 aaPredicted RBP9.27□□□□□ -0.93
LINC00649-203ENST00000427447 ZHX1Q9UKY1 873 aaPredicted RBP9.27□□□□□ -0.93
LINC00649-203ENST00000427447 LRRCC1Q9C099 1032 aa9.27□□□□□ -0.93
LINC00649-203ENST00000427447 CHGAP10645 457 aaKnown RBP9.27□□□□□ -0.93
LINC00649-203ENST00000427447 FMNL2Q96PY5 1086 aa9.26□□□□□ -0.93
LINC00649-203ENST00000427447 SLKQ9H2G2 1235 aaPredicted RBP9.26□□□□□ -0.93
LINC00649-203ENST00000427447 STMN1P16949 149 aa9.26□□□□□ -0.93
LINC00649-203ENST00000427447 RPAINQ86UA6 219 aa9.26□□□□□ -0.93
LINC00649-203ENST00000427447 ATP6V1AP38606 617 aa9.26□□□□□ -0.93
LINC00649-203ENST00000427447 CCDC112Q8NEF3 446 aa9.26□□□□□ -0.93
LINC00649-203ENST00000427447 BICD1Q96G01 975 aa9.26□□□□□ -0.93
LINC00649-203ENST00000427447 STAMBPO95630 424 aa9.26□□□□□ -0.93
LINC00649-203ENST00000427447 KCNA4P22459 653 aa9.26□□□□□ -0.93
LINC00649-203ENST00000427447 NAP1L3Q99457 506 aaPredicted RBP9.26□□□□□ -0.93
LINC00649-203ENST00000427447 A0A1B0GUL7 405 aa9.25□□□□□ -0.93
LINC00649-203ENST00000427447 RGS3P49796 1198 aa9.25□□□□□ -0.93
LINC00649-203ENST00000427447 BAZ1AQ9NRL2 1556 aaPredicted RBP9.25□□□□□ -0.93
LINC00649-203ENST00000427447 TMF1P82094 1093 aa9.25□□□□□ -0.93
LINC00649-203ENST00000427447 FRMD4BQ9Y2L6 1034 aa9.25□□□□□ -0.93
LINC00649-203ENST00000427447 LUC7L2Q9Y383 392 aaKnown RBP9.25□□□□□ -0.93
LINC00649-203ENST00000427447 ZNF853P0CG23 659 aa9.25□□□□□ -0.93
LINC00649-203ENST00000427447 BMS1Q14692 1282 aaKnown RBP9.25□□□□□ -0.93
LINC00649-203ENST00000427447 WHAMMP3Q1A5X7 153 aa9.25□□□□□ -0.93
LINC00649-203ENST00000427447 PSMD7P51665 324 aa9.25□□□□□ -0.93
LINC00649-203ENST00000427447 NUCB1Q02818 461 aa9.25□□□□□ -0.93
LINC00649-203ENST00000427447 APLFQ8IW19 511 aaPredicted RBP9.25□□□□□ -0.93
LINC00649-203ENST00000427447 HOOK1Q9UJC3 728 aaKnown RBP9.25□□□□□ -0.93
LINC00649-203ENST00000427447 DDX10Q13206 875 aaKnown RBP9.25□□□□□ -0.93
LINC00649-203ENST00000427447 SMARCE1Q969G3 411 aa9.24□□□□□ -0.93
LINC00649-203ENST00000427447 ST18O60284 1047 aa9.24□□□□□ -0.93
LINC00649-203ENST00000427447 ZNF365Q70YC5 407 aa9.24□□□□□ -0.93
LINC00649-203ENST00000427447 NOL3O60936 208 aaKnown RBP9.24□□□□□ -0.93
LINC00649-203ENST00000427447 TACC1O75410 805 aa9.24□□□□□ -0.93
LINC00649-203ENST00000427447 PPFIA2O75334 1257 aa9.24□□□□□ -0.93
LINC00649-203ENST00000427447 IKQ13123 557 aaPredicted RBP9.24□□□□□ -0.93
LINC00649-203ENST00000427447 MCM6Q14566 821 aa9.24□□□□□ -0.93
LINC00649-203ENST00000427447 PPP1R12BO60237 982 aaPredicted RBP9.24□□□□□ -0.93
LINC00649-203ENST00000427447 ESPNB1AK53 854 aa9.23□□□□□ -0.93
LINC00649-203ENST00000427447 SMC6Q96SB8 1091 aa9.23□□□□□ -0.93
LINC00649-203ENST00000427447 NEUROD2Q15784 382 aa9.23□□□□□ -0.93
LINC00649-203ENST00000427447 C6orf163Q5TEZ5 329 aa9.23□□□□□ -0.93
LINC00649-203ENST00000427447 EEA1Q15075 1411 aa9.23□□□□□ -0.93
LINC00649-203ENST00000427447 KIF5CO60282 957 aa9.23□□□□□ -0.93
LINC00649-203ENST00000427447 HSPA4P34932 840 aa9.23□□□□□ -0.93
LINC00649-203ENST00000427447 TMCO3Q6UWJ1 677 aa9.23□□□□□ -0.93
LINC00649-203ENST00000427447 GOLGA2Q08379 1002 aa9.23□□□□□ -0.93
LINC00649-203ENST00000427447 CFAP45Q9UL16 551 aa9.23□□□□□ -0.93
LINC00649-203ENST00000427447 ARID3CA6NKF2 412 aa9.23□□□□□ -0.93
LINC00649-203ENST00000427447 NAT10Q9H0A0 1025 aaKnown RBP9.23□□□□□ -0.93
LINC00649-203ENST00000427447 ZNF280CQ8ND82 737 aa9.22□□□□□ -0.93
LINC00649-203ENST00000427447 ABCC9O60706 1549 aa9.22□□□□□ -0.93
LINC00649-203ENST00000427447 KIF1CO43896 1103 aaKnown RBP9.22□□□□□ -0.93
LINC00649-203ENST00000427447 TPD52L1Q16890 204 aaPredicted RBP9.22□□□□□ -0.93
LINC00649-203ENST00000427447 SPECC1LQ69YQ0 1117 aa9.22□□□□□ -0.93
LINC00649-203ENST00000427447 CASQ1P31415 396 aa9.22□□□□□ -0.93
LINC00649-203ENST00000427447 GBP7Q8N8V2 638 aaPredicted RBP9.22□□□□□ -0.93
LINC00649-203ENST00000427447 DESP17661 470 aa9.21□□□□□ -0.93
LINC00649-203ENST00000427447 A0A0G2JS52 829 aa9.21□□□□□ -0.93
LINC00649-203ENST00000427447 PPP4R4Q6NUP7 873 aa9.21□□□□□ -0.93
LINC00649-203ENST00000427447 RUFY3Q7L099 469 aa9.21□□□□□ -0.93
LINC00649-203ENST00000427447 PRPF31Q8WWY3 499 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms