RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 NCBP3Q53F19 620 aaKnown RBP6.77□□□□□ -1.33
ITGB1-205ENST00000423113 NPHP4O75161 1426 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-205ENST00000423113 TULP4Q9NRJ4 1543 aa6.75□□□□□ -1.33
ITGB1-205ENST00000423113 PLCH1Q4KWH8 1693 aa6.75□□□□□ -1.33
ITGB1-205ENST00000423113 FAM208AQ9UK61 1670 aaKnown RBP6.75□□□□□ -1.33
ITGB1-205ENST00000423113 SENP3Q9H4L4 574 aaPredicted RBP6.75□□□□□ -1.33
ITGB1-205ENST00000423113 PTPRUQ92729 1446 aa6.74□□□□□ -1.33
ITGB1-205ENST00000423113 WASHC2CQ9Y4E1 1318 aa6.74□□□□□ -1.33
ITGB1-205ENST00000423113 PIK3C2AO00443 1686 aa6.74□□□□□ -1.33
ITGB1-205ENST00000423113 KCNA4P22459 653 aa6.73□□□□□ -1.33
ITGB1-205ENST00000423113 IL27Q8NEV9 243 aa6.73□□□□□ -1.33
ITGB1-205ENST00000423113 COL16A1Q07092 1604 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-205ENST00000423113 LMO7Q8WWI1 1683 aa6.73□□□□□ -1.33
ITGB1-205ENST00000423113 PKD2Q13563 968 aa6.73□□□□□ -1.33
ITGB1-205ENST00000423113 ABCC11Q96J66 1382 aa6.72□□□□□ -1.33
ITGB1-205ENST00000423113 NRAPQ86VF7 1730 aa6.72□□□□□ -1.33
ITGB1-205ENST00000423113 NWD2Q9ULI1 1742 aa6.72□□□□□ -1.33
ITGB1-205ENST00000423113 LRPPRCP42704 1394 aaKnown RBP6.72□□□□□ -1.33
ITGB1-205ENST00000423113 VSIG10Q8N0Z9 540 aa6.72□□□□□ -1.33
ITGB1-205ENST00000423113 MSH5O43196 834 aa6.71□□□□□ -1.33
ITGB1-205ENST00000423113 ANKARQ7Z5J8 1434 aa6.71□□□□□ -1.34
ITGB1-205ENST00000423113 COL18A1P39060 1754 aa6.71□□□□□ -1.34
ITGB1-205ENST00000423113 A0A0U1RQG5 324 aaPredicted RBP6.7□□□□□ -1.34
ITGB1-205ENST00000423113 RGPD1P0DJD0 1748 aa6.7□□□□□ -1.34
ITGB1-205ENST00000423113 ROBO1Q9Y6N7 1651 aa6.7□□□□□ -1.34
ITGB1-205ENST00000423113 PHF23Q9BUL5 403 aaPredicted RBP6.7□□□□□ -1.34
ITGB1-205ENST00000423113 CHIC2Q9UKJ5 165 aa6.7□□□□□ -1.34
ITGB1-205ENST00000423113 ARID4BQ4LE39 1312 aaPredicted RBP6.69□□□□□ -1.34
ITGB1-205ENST00000423113 IDI1Q13907 227 aa6.69□□□□□ -1.34
ITGB1-205ENST00000423113 PUS7Q96PZ0 661 aaKnown RBP6.69□□□□□ -1.34
ITGB1-205ENST00000423113 YTHDC2Q9H6S0 1430 aaKnown RBP6.69□□□□□ -1.34
ITGB1-205ENST00000423113 ADGRL3Q9HAR2 1447 aa6.69□□□□□ -1.34
ITGB1-205ENST00000423113 VIRMAQ69YN4 1812 aaKnown RBP6.69□□□□□ -1.34
ITGB1-205ENST00000423113 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.69□□□□□ -1.34
ITGB1-205ENST00000423113 ATP7BP35670 1465 aa6.68□□□□□ -1.34
ITGB1-205ENST00000423113 SLIT3O75094 1523 aa6.68□□□□□ -1.34
ITGB1-205ENST00000423113 C14orf93Q9H972 538 aaKnown RBP6.68□□□□□ -1.34
ITGB1-205ENST00000423113 NOP58Q9Y2X3 529 aaKnown RBP6.67□□□□□ -1.34
ITGB1-205ENST00000423113 TBX22Q9Y458 520 aa6.67□□□□□ -1.34
ITGB1-205ENST00000423113 CD163L1Q9NR16 1453 aa6.67□□□□□ -1.34
ITGB1-205ENST00000423113 LTN1O94822 1766 aa6.67□□□□□ -1.34
ITGB1-205ENST00000423113 BRD4O60885 1362 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-205ENST00000423113 CICQ96RK0 1608 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-205ENST00000423113 TULP1O00294 542 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-205ENST00000423113 ANP32AP39687 249 aaKnown RBP6.67□□□□□ -1.34
ITGB1-205ENST00000423113 IRX6P78412 446 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-205ENST00000423113 SLC4A1APQ9BWU0 796 aaKnown RBP6.67□□□□□ -1.34
ITGB1-205ENST00000423113 PHLPP1O60346 1717 aa6.66□□□□□ -1.34
ITGB1-205ENST00000423113 SSH2Q76I76 1423 aa6.66□□□□□ -1.34
ITGB1-205ENST00000423113 FBXO31Q5XUX0 539 aaPredicted RBP6.66□□□□□ -1.34
ITGB1-205ENST00000423113 ADAMTS7Q9UKP4 1686 aa6.66□□□□□ -1.34
ITGB1-205ENST00000423113 ESF1Q9H501 851 aaKnown RBP6.66□□□□□ -1.34
ITGB1-205ENST00000423113 ZBTB47Q9UFB7 747 aaPredicted RBP6.66□□□□□ -1.34
ITGB1-205ENST00000423113 THEMISQ8N1K5 641 aaPredicted RBP6.65□□□□□ -1.34
ITGB1-205ENST00000423113 PXDNQ92626 1479 aa6.65□□□□□ -1.34
ITGB1-205ENST00000423113 SHANK3Q9BYB0 1731 aa6.65□□□□□ -1.35
ITGB1-205ENST00000423113 PARP4Q9UKK3 1724 aaKnown RBP6.65□□□□□ -1.35
ITGB1-205ENST00000423113 TRIM52Q96A61 297 aa6.64□□□□□ -1.35
ITGB1-205ENST00000423113 NINLQ9Y2I6 1382 aa6.64□□□□□ -1.35
ITGB1-205ENST00000423113 GGT6Q6P531 493 aa6.64□□□□□ -1.35
ITGB1-205ENST00000423113 FANCIQ9NVI1 1328 aa6.64□□□□□ -1.35
ITGB1-205ENST00000423113 METP08581 1390 aa6.64□□□□□ -1.35
ITGB1-205ENST00000423113 RGPD3A6NKT7 1758 aaPredicted RBP6.64□□□□□ -1.35
ITGB1-205ENST00000423113 RGPD4Q7Z3J3 1758 aa6.64□□□□□ -1.35
ITGB1-205ENST00000423113 NEFMP07197 916 aa6.63□□□□□ -1.35
ITGB1-205ENST00000423113 LTKP29376 864 aa6.63□□□□□ -1.35
ITGB1-205ENST00000423113 SMG6Q86US8 1419 aaKnown RBP6.63□□□□□ -1.35
ITGB1-205ENST00000423113 NPM2Q86SE8 214 aaKnown RBP6.62□□□□□ -1.35
ITGB1-205ENST00000423113 ZNF831Q5JPB2 1677 aa6.62□□□□□ -1.35
ITGB1-205ENST00000423113 CPSF1Q10570 1443 aaKnown RBP6.62□□□□□ -1.35
ITGB1-205ENST00000423113 PKD1L3Q7Z443 1732 aa6.62□□□□□ -1.35
ITGB1-205ENST00000423113 POLR3AO14802 1390 aaPredicted RBP6.62□□□□□ -1.35
ITGB1-205ENST00000423113 NFAT5O94916 1531 aa6.62□□□□□ -1.35
ITGB1-205ENST00000423113 PPP1R15AO75807 674 aaPredicted RBP6.62□□□□□ -1.35
ITGB1-205ENST00000423113 COL14A1Q05707 1796 aaKnown RBP6.61□□□□□ -1.35
ITGB1-205ENST00000423113 VGFO15240 615 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-205ENST00000423113 EIF3AQ14152 1382 aaKnown RBP6.61□□□□□ -1.35
ITGB1-205ENST00000423113 PLEKHG2Q9H7P9 1386 aa6.61□□□□□ -1.35
ITGB1-205ENST00000423113 PEAK1Q9H792 1746 aa6.61□□□□□ -1.35
ITGB1-205ENST00000423113 ADGRF5Q8IZF2 1346 aa6.61□□□□□ -1.35
ITGB1-205ENST00000423113 SIPA1L3O60292 1781 aaPredicted RBP6.6□□□□□ -1.35
ITGB1-205ENST00000423113 ROBO2Q9HCK4 1378 aa6.6□□□□□ -1.35
ITGB1-205ENST00000423113 HDGFP51858 240 aaKnown RBP6.6□□□□□ -1.35
ITGB1-205ENST00000423113 ZMYND15Q9H091 742 aa6.6□□□□□ -1.35
ITGB1-205ENST00000423113 DMRT2Q9Y5R5 561 aa6.6□□□□□ -1.35
ITGB1-205ENST00000423113 NPC1L1Q9UHC9 1359 aa6.6□□□□□ -1.35
ITGB1-205ENST00000423113 NCAPD2Q15021 1401 aa6.59□□□□□ -1.35
ITGB1-205ENST00000423113 LAS1LQ9Y4W2 734 aaKnown RBP6.59□□□□□ -1.35
ITGB1-205ENST00000423113 RGPD5Q99666 1765 aa6.59□□□□□ -1.35
ITGB1-205ENST00000423113 KCNA6P17658 529 aa6.59□□□□□ -1.36
ITGB1-205ENST00000423113 TPRNQ4KMQ1 711 aa6.59□□□□□ -1.36
ITGB1-205ENST00000423113 MAP2P11137 1827 aaKnown RBP6.58□□□□□ -1.36
ITGB1-205ENST00000423113 CEBPAP49715 358 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-205ENST00000423113 MLECQ14165 292 aa6.58□□□□□ -1.36
ITGB1-205ENST00000423113 THSD7AQ9UPZ6 1657 aa6.58□□□□□ -1.36
ITGB1-205ENST00000423113 ANKLE2Q86XL3 938 aa6.58□□□□□ -1.36
ITGB1-205ENST00000423113 NBPF8Q3BBV2 869 aa6.58□□□□□ -1.36
ITGB1-205ENST00000423113 L3MBTL2Q969R5 705 aa6.58□□□□□ -1.36
ITGB1-205ENST00000423113 LRRC37A3O60309 1634 aa6.57□□□□□ -1.36
ITGB1-205ENST00000423113 PAPPAQ13219 1627 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms