RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 PRDM4Q9UKN5 801 aa22.06■■□□□ 1.12
PMS1-206ENST00000418224 PDE3AQ14432 1141 aa22.06■■□□□ 1.12
PMS1-206ENST00000418224 ABCC2Q92887 1545 aa22.06■■□□□ 1.12
PMS1-206ENST00000418224 WWC1Q8IX03 1113 aa22.06■■□□□ 1.12
PMS1-206ENST00000418224 PLCH2O75038 1416 aa22.05■■□□□ 1.12
PMS1-206ENST00000418224 SCAPERQ9BY12 1400 aa22.05■■□□□ 1.12
PMS1-206ENST00000418224 MFAP1P55081 439 aaKnown RBP22.04■■□□□ 1.12
PMS1-206ENST00000418224 STAC3Q96MF2 364 aa22.04■■□□□ 1.12
PMS1-206ENST00000418224 BCL2L13Q9BXK5 485 aa22.04■■□□□ 1.12
PMS1-206ENST00000418224 DDX11L8A8MPP1 907 aa22.04■■□□□ 1.12
PMS1-206ENST00000418224 MYOM1P52179 1685 aa22.03■■□□□ 1.12
PMS1-206ENST00000418224 TRPM2O94759 1503 aa22.02■■□□□ 1.12
PMS1-206ENST00000418224 KIF3BO15066 747 aa22.02■■□□□ 1.12
PMS1-206ENST00000418224 PDZRN3Q9UPQ7 1066 aa22.02■■□□□ 1.12
PMS1-206ENST00000418224 SPHKAPQ2M3C7 1700 aa22.02■■□□□ 1.11
PMS1-206ENST00000418224 ADGRF5Q8IZF2 1346 aa22.02■■□□□ 1.11
PMS1-206ENST00000418224 CLTCL1P53675 1640 aa22.01■■□□□ 1.11
PMS1-206ENST00000418224 MORC1Q86VD1 984 aa22.01■■□□□ 1.11
PMS1-206ENST00000418224 KDM5AP29375 1690 aaKnown RBP22.01■■□□□ 1.11
PMS1-206ENST00000418224 C22orf23Q9BZE7 217 aa22■■□□□ 1.11
PMS1-206ENST00000418224 CHGAP10645 457 aaKnown RBP21.99■■□□□ 1.11
PMS1-206ENST00000418224 TNNQ9UQP3 1299 aa21.99■■□□□ 1.11
PMS1-206ENST00000418224 KANK1Q14678 1352 aa21.99■■□□□ 1.11
PMS1-206ENST00000418224 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
PMS1-206ENST00000418224 NGEFQ8N5V2 710 aa21.99■■□□□ 1.11
PMS1-206ENST00000418224 RIPK4P57078 832 aa21.98■■□□□ 1.11
PMS1-206ENST00000418224 ERVK-7P63135 1459 aa21.98■■□□□ 1.11
PMS1-206ENST00000418224 HSCBQ8IWL3 235 aa21.97■■□□□ 1.11
PMS1-206ENST00000418224 R3HCC1Q9Y3T6 440 aaKnown RBP21.97■■□□□ 1.11
PMS1-206ENST00000418224 PCDHB15Q9Y5E8 787 aa21.97■■□□□ 1.11
PMS1-206ENST00000418224 PTPRTO14522 1441 aa21.97■■□□□ 1.11
PMS1-206ENST00000418224 ABCC1P33527 1531 aa21.97■■□□□ 1.11
PMS1-206ENST00000418224 TCP11L2Q8N4U5 519 aa21.96■■□□□ 1.11
PMS1-206ENST00000418224 ISY1Q9ULR0 285 aaKnown RBP21.96■■□□□ 1.11
PMS1-206ENST00000418224 CEP152O94986 1710 aa21.96■■□□□ 1.11
PMS1-206ENST00000418224 SLC24A1O60721 1099 aa21.96■■□□□ 1.11
PMS1-206ENST00000418224 MSNP26038 577 aaKnown RBP21.96■■□□□ 1.11
PMS1-206ENST00000418224 RARSP54136 660 aaKnown RBP21.96■■□□□ 1.11
PMS1-206ENST00000418224 RLBP1P12271 317 aa21.96■■□□□ 1.11
PMS1-206ENST00000418224 PMFBP1Q8TBY8 1022 aa21.95■■□□□ 1.1
PMS1-206ENST00000418224 NINLQ9Y2I6 1382 aa21.95■■□□□ 1.1
PMS1-206ENST00000418224 RUNDC1Q96C34 613 aa21.94■■□□□ 1.1
PMS1-206ENST00000418224 TRAK1Q9UPV9 953 aa21.94■■□□□ 1.1
PMS1-206ENST00000418224 OFD1O75665 1012 aa21.94■■□□□ 1.1
PMS1-206ENST00000418224 ZSCAN30Q86W11 494 aa21.94■■□□□ 1.1
PMS1-206ENST00000418224 TNPO1Q92973 898 aaKnown RBP21.93■■□□□ 1.1
PMS1-206ENST00000418224 SLC12A5Q9H2X9 1139 aa21.93■■□□□ 1.1
PMS1-206ENST00000418224 UGGT1Q9NYU2 1555 aa21.93■■□□□ 1.1
PMS1-206ENST00000418224 VIRMAQ69YN4 1812 aaKnown RBP21.93■■□□□ 1.1
PMS1-206ENST00000418224 CHD1O14646 1710 aa21.93■■□□□ 1.1
PMS1-206ENST00000418224 POLR3AO14802 1390 aaPredicted RBP21.93■■□□□ 1.1
PMS1-206ENST00000418224 FOXD4L1Q9NU39 408 aa21.93■■□□□ 1.1
PMS1-206ENST00000418224 NSD3Q9BZ95 1437 aa21.92■■□□□ 1.1
PMS1-206ENST00000418224 ANP32BQ92688 251 aaKnown RBP21.92■■□□□ 1.1
PMS1-206ENST00000418224 AAMPQ13685 434 aa21.92■■□□□ 1.1
PMS1-206ENST00000418224 NASPP49321 788 aaPredicted RBP21.91■■□□□ 1.1
PMS1-206ENST00000418224 PRDM10Q9NQV6 1147 aa21.91■■□□□ 1.1
PMS1-206ENST00000418224 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.9■■□□□ 1.1
PMS1-206ENST00000418224 ZNF692Q9BU19 519 aaPredicted RBP21.9■■□□□ 1.1
PMS1-206ENST00000418224 CCDC173Q0VFZ6 552 aa21.9■■□□□ 1.1
PMS1-206ENST00000418224 ZHX1Q9UKY1 873 aaPredicted RBP21.9■■□□□ 1.1
PMS1-206ENST00000418224 MTHFSP49914 203 aa21.89■■□□□ 1.09
PMS1-206ENST00000418224 ZFYVE16Q7Z3T8 1539 aa21.88■■□□□ 1.09
PMS1-206ENST00000418224 GBP4Q96PP9 640 aa21.88■■□□□ 1.09
PMS1-206ENST00000418224 RWDD1Q9H446 243 aaPredicted RBP21.88■■□□□ 1.09
PMS1-206ENST00000418224 RTEL1-TNFRSF6BF6WH68 1400 aa21.87■■□□□ 1.09
PMS1-206ENST00000418224 HSP90AB1P08238 724 aaKnown RBP21.86■■□□□ 1.09
PMS1-206ENST00000418224 CFAP53Q96M91 514 aa21.86■■□□□ 1.09
PMS1-206ENST00000418224 ABCA6Q8N139 1617 aa21.86■■□□□ 1.09
PMS1-206ENST00000418224 TET3O43151 1660 aa21.86■■□□□ 1.09
PMS1-206ENST00000418224 FTSJ3Q8IY81 847 aaKnown RBP21.85■■□□□ 1.09
PMS1-206ENST00000418224 ZCCHC11Q5TAX3 1644 aaKnown RBP21.85■■□□□ 1.09
PMS1-206ENST00000418224 TMEM132EQ6IEE7 984 aa21.85■■□□□ 1.09
PMS1-206ENST00000418224 U2AF1L5P0DN76 240 aaPredicted RBP21.85■■□□□ 1.09
PMS1-206ENST00000418224 U2AF1Q01081 240 aaKnown RBP eCLIP21.85■■□□□ 1.09
PMS1-206ENST00000418224 UQCRHLA0A096LP55 91 aa21.84■■□□□ 1.09
PMS1-206ENST00000418224 UQCRHP07919 91 aa21.84■■□□□ 1.09
PMS1-206ENST00000418224 XPCQ01831 940 aaPredicted RBP21.84■■□□□ 1.09
PMS1-206ENST00000418224 SHROOM2Q13796 1616 aa21.84■■□□□ 1.09
PMS1-206ENST00000418224 MAP3K4Q9Y6R4 1608 aa21.84■■□□□ 1.09
PMS1-206ENST00000418224 WDR63Q8IWG1 891 aa21.84■■□□□ 1.09
PMS1-206ENST00000418224 MAP7D2Q96T17 732 aa21.84■■□□□ 1.09
PMS1-206ENST00000418224 SKOR2Q2VWA4 1001 aaPredicted RBP21.83■■□□□ 1.08
PMS1-206ENST00000418224 PPP1R9BQ96SB3 815 aa21.83■■□□□ 1.08
PMS1-206ENST00000418224 KIAA1210Q9ULL0 1709 aa21.82■■□□□ 1.08
PMS1-206ENST00000418224 NOS1P29475 1434 aa21.81■■□□□ 1.08
PMS1-206ENST00000418224 TSR2Q969E8 191 aaKnown RBP21.8■■□□□ 1.08
PMS1-206ENST00000418224 MYOM2P54296 1465 aa21.8■■□□□ 1.08
PMS1-206ENST00000418224 ATP7AQ04656 1500 aa21.79■■□□□ 1.08
PMS1-206ENST00000418224 MVPQ14764 893 aaKnown RBP21.79■■□□□ 1.08
PMS1-206ENST00000418224 ZKSCAN2Q63HK3 967 aa21.79■■□□□ 1.08
PMS1-206ENST00000418224 NCLP19338 710 aaKnown RBP21.79■■□□□ 1.08
PMS1-206ENST00000418224 SENP3Q9H4L4 574 aaPredicted RBP21.79■■□□□ 1.08
PMS1-206ENST00000418224 DDX49Q9Y6V7 483 aaKnown RBP21.79■■□□□ 1.08
PMS1-206ENST00000418224 DZIP1LQ8IYY4 767 aaKnown RBP21.78■■□□□ 1.08
PMS1-206ENST00000418224 DEPDC5O75140 1603 aa21.78■■□□□ 1.08
PMS1-206ENST00000418224 ZBTB7CA1YPR0 619 aa21.77■■□□□ 1.08
PMS1-206ENST00000418224 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
PMS1-206ENST00000418224 SMC4Q9NTJ3 1288 aa21.77■■□□□ 1.08
PMS1-206ENST00000418224 NUTM2DQ5VT03 806 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms