RNA–Protein interactions for RNA: ENST00000417599.6

SMARCA2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-211ENST00000417599 LIMD1Q9UGP4 676 aa12.87□□□□□ -0.35
SMARCA2-211ENST00000417599 NDUFV2P19404 249 aa12.86□□□□□ -0.35
SMARCA2-211ENST00000417599 SPNS2Q8IVW8 549 aa12.86□□□□□ -0.35
SMARCA2-211ENST00000417599 PCDHB3Q9Y5E6 796 aa12.86□□□□□ -0.35
SMARCA2-211ENST00000417599 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
SMARCA2-211ENST00000417599 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMARCA2-211ENST00000417599 PTPN5P54829 565 aa12.84□□□□□ -0.35
SMARCA2-211ENST00000417599 PROCA1Q8NCQ7 364 aaPredicted RBP12.84□□□□□ -0.35
SMARCA2-211ENST00000417599 SUPT5HO00267 1087 aaKnown RBP12.83□□□□□ -0.36
SMARCA2-211ENST00000417599 Q3C1V9 767 aa12.83□□□□□ -0.36
SMARCA2-211ENST00000417599 MORN1Q5T089 497 aa12.83□□□□□ -0.36
SMARCA2-211ENST00000417599 PRPF38BQ5VTL8 546 aaKnown RBP12.83□□□□□ -0.36
SMARCA2-211ENST00000417599 NR1I2O75469 434 aa12.82□□□□□ -0.36
SMARCA2-211ENST00000417599 ZBTB3Q9H5J0 574 aa12.82□□□□□ -0.36
SMARCA2-211ENST00000417599 CSPP1Q1MSJ5 1256 aa12.81□□□□□ -0.36
SMARCA2-211ENST00000417599 HLA-CQ95604 372 aa12.81□□□□□ -0.36
SMARCA2-211ENST00000417599 GUCA2AQ02747 115 aa12.8□□□□□ -0.36
SMARCA2-211ENST00000417599 PUS10Q3MIT2 529 aaKnown RBP12.8□□□□□ -0.36
SMARCA2-211ENST00000417599 SPDYE5A6NIY4 337 aa12.79□□□□□ -0.36
SMARCA2-211ENST00000417599 HCSTQ9UBK5 93 aa12.79□□□□□ -0.36
SMARCA2-211ENST00000417599 NUTM2BA6NNL0 878 aaPredicted RBP12.78□□□□□ -0.36
SMARCA2-211ENST00000417599 NUTM2EB1AL46 878 aaPredicted RBP12.78□□□□□ -0.36
SMARCA2-211ENST00000417599 LILRB3O75022 631 aa12.78□□□□□ -0.36
SMARCA2-211ENST00000417599 MTMR2Q13614 643 aa12.78□□□□□ -0.36
SMARCA2-211ENST00000417599 NUTM2DQ5VT03 806 aaPredicted RBP12.78□□□□□ -0.36
SMARCA2-211ENST00000417599 PPP2R2DQ66LE6 453 aa12.78□□□□□ -0.36
SMARCA2-211ENST00000417599 NUTM2AQ8IVF1 878 aaPredicted RBP12.78□□□□□ -0.36
SMARCA2-211ENST00000417599 PCDHGC3Q9UN70 934 aa12.78□□□□□ -0.36
SMARCA2-211ENST00000417599 CCDC88BA6NC98 1476 aa12.78□□□□□ -0.36
SMARCA2-211ENST00000417599 BLOC1S3Q6QNY0 202 aa12.77□□□□□ -0.37
SMARCA2-211ENST00000417599 SLC27A5Q9Y2P5 690 aa12.77□□□□□ -0.37
SMARCA2-211ENST00000417599 PCDHB15Q9Y5E8 787 aa12.77□□□□□ -0.37
SMARCA2-211ENST00000417599 C6orf229H3BNL8 230 aa12.76□□□□□ -0.37
SMARCA2-211ENST00000417599 QPCTQ16769 361 aa12.76□□□□□ -0.37
SMARCA2-211ENST00000417599 SALL2Q9Y467 1007 aaPredicted RBP12.76□□□□□ -0.37
SMARCA2-211ENST00000417599 HRCP23327 699 aa12.75□□□□□ -0.37
SMARCA2-211ENST00000417599 NESP48681 1621 aa12.74□□□□□ -0.37
SMARCA2-211ENST00000417599 RFC5P40937 340 aa12.74□□□□□ -0.37
SMARCA2-211ENST00000417599 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
SMARCA2-211ENST00000417599 CADPSQ9ULU8 1353 aa12.73□□□□□ -0.37
SMARCA2-211ENST00000417599 FMNL1O95466 1100 aaPredicted RBP12.73□□□□□ -0.37
SMARCA2-211ENST00000417599 COPS2P61201 443 aa12.73□□□□□ -0.37
SMARCA2-211ENST00000417599 ERICH6Q7L0X2 663 aa12.73□□□□□ -0.37
SMARCA2-211ENST00000417599 SCUBE3Q8IX30 993 aa12.73□□□□□ -0.37
SMARCA2-211ENST00000417599 CABLES1Q8TDN4 633 aa12.73□□□□□ -0.37
SMARCA2-211ENST00000417599 TMEM259Q4ZIN3 620 aa12.72□□□□□ -0.37
SMARCA2-211ENST00000417599 RETREG3Q86VR2 466 aa12.72□□□□□ -0.37
SMARCA2-211ENST00000417599 MTRQ99707 1265 aa12.72□□□□□ -0.37
SMARCA2-211ENST00000417599 IL21Q9HBE4 155 aa12.71□□□□□ -0.37
SMARCA2-211ENST00000417599 FLIIQ13045 1269 aa12.7□□□□□ -0.38
SMARCA2-211ENST00000417599 HELBQ8NG08 1087 aaPredicted RBP12.7□□□□□ -0.38
SMARCA2-211ENST00000417599 CFTRP13569 1480 aa12.7□□□□□ -0.38
SMARCA2-211ENST00000417599 MMRN1Q13201 1228 aa12.69□□□□□ -0.38
SMARCA2-211ENST00000417599 BRICD5Q6PL45 260 aa12.69□□□□□ -0.38
SMARCA2-211ENST00000417599 ZPR1O75312 459 aa12.68□□□□□ -0.38
SMARCA2-211ENST00000417599 RTL5Q5HYW3 569 aaPredicted RBP12.68□□□□□ -0.38
SMARCA2-211ENST00000417599 RNF19BQ6ZMZ0 732 aa12.68□□□□□ -0.38
SMARCA2-211ENST00000417599 BANK1Q8NDB2 785 aa12.68□□□□□ -0.38
SMARCA2-211ENST00000417599 USB1Q9BQ65 265 aaKnown RBP12.68□□□□□ -0.38
SMARCA2-211ENST00000417599 TJAP1Q5JTD0 557 aa12.67□□□□□ -0.38
SMARCA2-211ENST00000417599 THAP11Q96EK4 314 aa12.67□□□□□ -0.38
SMARCA2-211ENST00000417599 PRR7Q8TB68 274 aa12.66□□□□□ -0.38
SMARCA2-211ENST00000417599 SYMPKQ92797 1274 aaKnown RBP12.66□□□□□ -0.38
SMARCA2-211ENST00000417599 FBXO31Q5XUX0 539 aaPredicted RBP12.65□□□□□ -0.38
SMARCA2-211ENST00000417599 SPSB2Q99619 263 aa12.65□□□□□ -0.38
SMARCA2-211ENST00000417599 AP1G2O75843 785 aa12.64□□□□□ -0.39
SMARCA2-211ENST00000417599 ADH1BP00325 375 aa12.64□□□□□ -0.39
SMARCA2-211ENST00000417599 MSS51Q4VC12 460 aa12.64□□□□□ -0.39
SMARCA2-211ENST00000417599 DESI1Q6ICB0 168 aa12.64□□□□□ -0.39
SMARCA2-211ENST00000417599 TSC1Q92574 1164 aa12.64□□□□□ -0.39
SMARCA2-211ENST00000417599 PDS5BQ9NTI5 1447 aa12.63□□□□□ -0.39
SMARCA2-211ENST00000417599 CFAP99D6REC4 459 aa12.63□□□□□ -0.39
SMARCA2-211ENST00000417599 APBB1O00213 710 aa12.62□□□□□ -0.39
SMARCA2-211ENST00000417599 PRDM2Q13029 1718 aa12.62□□□□□ -0.39
SMARCA2-211ENST00000417599 TLL1O43897 1013 aa12.61□□□□□ -0.39
SMARCA2-211ENST00000417599 ITGBL1O95965 494 aaPredicted RBP12.61□□□□□ -0.39
SMARCA2-211ENST00000417599 USP17L8P0C7I0 530 aa12.61□□□□□ -0.39
SMARCA2-211ENST00000417599 SOCS7O14512 581 aa12.6□□□□□ -0.39
SMARCA2-211ENST00000417599 KCNC4Q03721 635 aa12.6□□□□□ -0.39
SMARCA2-211ENST00000417599 MCM6Q14566 821 aa12.6□□□□□ -0.39
SMARCA2-211ENST00000417599 KIF21AQ7Z4S6 1674 aa12.6□□□□□ -0.39
SMARCA2-211ENST00000417599 JUNDP17535 347 aa12.59□□□□□ -0.39
SMARCA2-211ENST00000417599 C14orf37Q86TY3 774 aa12.59□□□□□ -0.39
SMARCA2-211ENST00000417599 ZNF516Q92618 1163 aa12.59□□□□□ -0.39
SMARCA2-211ENST00000417599 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
SMARCA2-211ENST00000417599 FANCD2Q9BXW9 1451 aa12.57□□□□□ -0.4
SMARCA2-211ENST00000417599 SLC6A16Q9GZN6 736 aa12.56□□□□□ -0.4
SMARCA2-211ENST00000417599 DXOO77932 396 aaKnown RBP12.55□□□□□ -0.4
SMARCA2-211ENST00000417599 CTDSPL2Q05D32 466 aa12.55□□□□□ -0.4
SMARCA2-211ENST00000417599 FAM160A2Q8N612 972 aaPredicted RBP12.55□□□□□ -0.4
SMARCA2-211ENST00000417599 MMP16P51512 607 aa12.54□□□□□ -0.4
SMARCA2-211ENST00000417599 PTPRNQ16849 979 aa12.54□□□□□ -0.4
SMARCA2-211ENST00000417599 PRM3Q9NNZ6 103 aa12.54□□□□□ -0.4
SMARCA2-211ENST00000417599 UBTFP17480 764 aaKnown RBP12.53□□□□□ -0.4
SMARCA2-211ENST00000417599 LYPD8Q6UX82 237 aa12.53□□□□□ -0.4
SMARCA2-211ENST00000417599 CEP164Q9UPV0 1460 aa12.53□□□□□ -0.4
SMARCA2-211ENST00000417599 MTMR14Q8NCE2 650 aa12.52□□□□□ -0.41
SMARCA2-211ENST00000417599 PRDM9Q9NQV7 894 aa12.52□□□□□ -0.41
SMARCA2-211ENST00000417599 SNRKQ9NRH2 765 aa12.52□□□□□ -0.41
SMARCA2-211ENST00000417599 THOC2Q8NI27 1593 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms