RNA–Protein interactions for RNA: ENST00000413233.1

TPM3P1-201, Transcript of tropomyosin 3 pseudogene 1, humanhuman

BASIC

Gene TPM3P1, Length 747 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P1-201ENST00000413233 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
TPM3P1-201ENST00000413233 RBM33Q96EV2 1170 aaKnown RBP13.65□□□□□ -0.22
TPM3P1-201ENST00000413233 CARD11Q9BXL7 1154 aa13.65□□□□□ -0.22
TPM3P1-201ENST00000413233 PTCH1Q13635 1447 aa13.64□□□□□ -0.23
TPM3P1-201ENST00000413233 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
TPM3P1-201ENST00000413233 COL16A1Q07092 1604 aaPredicted RBP13.64□□□□□ -0.23
TPM3P1-201ENST00000413233 NWD1Q149M9 1564 aa13.64□□□□□ -0.23
TPM3P1-201ENST00000413233 JCADQ9P266 1359 aa13.64□□□□□ -0.23
TPM3P1-201ENST00000413233 KCNA6P17658 529 aa13.64□□□□□ -0.23
TPM3P1-201ENST00000413233 NUTM2DQ5VT03 806 aaPredicted RBP13.64□□□□□ -0.23
TPM3P1-201ENST00000413233 UPF1Q92900 1129 aaKnown RBP eCLIP13.64□□□□□ -0.23
TPM3P1-201ENST00000413233 BCANQ96GW7 911 aa13.64□□□□□ -0.23
TPM3P1-201ENST00000413233 NKTRP30414 1462 aaKnown RBP13.63□□□□□ -0.23
TPM3P1-201ENST00000413233 SBNO2Q9Y2G9 1366 aa13.63□□□□□ -0.23
TPM3P1-201ENST00000413233 PROSER2Q86WR7 435 aaPredicted RBP13.63□□□□□ -0.23
TPM3P1-201ENST00000413233 METP08581 1390 aa13.62□□□□□ -0.23
TPM3P1-201ENST00000413233 LRP6O75581 1613 aa13.62□□□□□ -0.23
TPM3P1-201ENST00000413233 EIF4G2P78344 907 aaKnown RBP eCLIP13.62□□□□□ -0.23
TPM3P1-201ENST00000413233 KNDC1Q76NI1 1749 aa13.61□□□□□ -0.23
TPM3P1-201ENST00000413233 NBPF1Q3BBV0 1214 aa13.61□□□□□ -0.23
TPM3P1-201ENST00000413233 MSH6P52701 1360 aa13.6□□□□□ -0.23
TPM3P1-201ENST00000413233 ASXL1Q8IXJ9 1541 aa13.6□□□□□ -0.23
TPM3P1-201ENST00000413233 PUS7Q96PZ0 661 aaKnown RBP13.6□□□□□ -0.23
TPM3P1-201ENST00000413233 SLC26A8Q96RN1 970 aa13.6□□□□□ -0.23
TPM3P1-201ENST00000413233 AMOTL2Q9Y2J4 779 aa13.59□□□□□ -0.23
TPM3P1-201ENST00000413233 CHD2O14647 1828 aaKnown RBP13.59□□□□□ -0.23
TPM3P1-201ENST00000413233 SHPRHQ149N8 1683 aa13.59□□□□□ -0.23
TPM3P1-201ENST00000413233 XRN1Q8IZH2 1706 aaKnown RBP13.59□□□□□ -0.23
TPM3P1-201ENST00000413233 USP47Q96K76 1375 aa13.58□□□□□ -0.23
TPM3P1-201ENST00000413233 SLAIN2Q9P270 581 aa13.58□□□□□ -0.24
TPM3P1-201ENST00000413233 MEX3CQ5U5Q3 659 aaKnown RBP13.57□□□□□ -0.24
TPM3P1-201ENST00000413233 ZNF772Q68DY9 489 aaPredicted RBP13.57□□□□□ -0.24
TPM3P1-201ENST00000413233 TMEM132EQ6IEE7 984 aa13.57□□□□□ -0.24
TPM3P1-201ENST00000413233 SRCAPQ6ZRS2 3230 aa13.56□□□□□ -0.24
TPM3P1-201ENST00000413233 PTPRUQ92729 1446 aa13.56□□□□□ -0.24
TPM3P1-201ENST00000413233 SPATA31A6Q5VVP1 1343 aa13.56□□□□□ -0.24
TPM3P1-201ENST00000413233 CENPJQ9HC77 1338 aaPredicted RBP13.56□□□□□ -0.24
TPM3P1-201ENST00000413233 CDCA8Q53HL2 280 aa13.55□□□□□ -0.24
TPM3P1-201ENST00000413233 AHDC1Q5TGY3 1603 aaPredicted RBP13.54□□□□□ -0.24
TPM3P1-201ENST00000413233 TRAK1Q9UPV9 953 aa13.54□□□□□ -0.24
TPM3P1-201ENST00000413233 DCCP43146 1447 aa13.53□□□□□ -0.24
TPM3P1-201ENST00000413233 CDK12Q9NYV4 1490 aaPredicted RBP13.53□□□□□ -0.24
TPM3P1-201ENST00000413233 ARHGEF28Q8N1W1 1705 aaKnown RBP13.53□□□□□ -0.24
TPM3P1-201ENST00000413233 RXRBP28702 533 aa13.52□□□□□ -0.25
TPM3P1-201ENST00000413233 POGKQ9P215 609 aa13.52□□□□□ -0.25
TPM3P1-201ENST00000413233 ROBO2Q9HCK4 1378 aa13.52□□□□□ -0.25
TPM3P1-201ENST00000413233 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.52□□□□□ -0.25
TPM3P1-201ENST00000413233 ADGRB2O60241 1585 aa13.51□□□□□ -0.25
TPM3P1-201ENST00000413233 ST20-MTHFSA0A0A6YYL1 179 aa13.51□□□□□ -0.25
TPM3P1-201ENST00000413233 TMF1P82094 1093 aa13.51□□□□□ -0.25
TPM3P1-201ENST00000413233 PRAM1Q96QH2 718 aa13.51□□□□□ -0.25
TPM3P1-201ENST00000413233 TESK2Q96S53 571 aa13.51□□□□□ -0.25
TPM3P1-201ENST00000413233 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
TPM3P1-201ENST00000413233 HSPA5P11021 654 aaKnown RBP13.5□□□□□ -0.25
TPM3P1-201ENST00000413233 STK26Q9P289 416 aa13.5□□□□□ -0.25
TPM3P1-201ENST00000413233 EVC2Q86UK5 1308 aa13.49□□□□□ -0.25
TPM3P1-201ENST00000413233 C19orf44Q9H6X5 657 aa13.49□□□□□ -0.25
TPM3P1-201ENST00000413233 ADGRL3Q9HAR2 1447 aa13.48□□□□□ -0.25
TPM3P1-201ENST00000413233 NINLQ9Y2I6 1382 aa13.48□□□□□ -0.25
TPM3P1-201ENST00000413233 RGS12O14924 1447 aa13.47□□□□□ -0.25
TPM3P1-201ENST00000413233 CDC42BPGQ6DT37 1551 aa13.46□□□□□ -0.25
TPM3P1-201ENST00000413233 AFF2P51816 1311 aa13.46□□□□□ -0.25
TPM3P1-201ENST00000413233 NUTM2BA6NNL0 878 aaPredicted RBP13.46□□□□□ -0.25
TPM3P1-201ENST00000413233 NUTM2EB1AL46 878 aaPredicted RBP13.46□□□□□ -0.25
TPM3P1-201ENST00000413233 C14orf37Q86TY3 774 aa13.46□□□□□ -0.25
TPM3P1-201ENST00000413233 NUTM2AQ8IVF1 878 aaPredicted RBP13.46□□□□□ -0.25
TPM3P1-201ENST00000413233 ANKARQ7Z5J8 1434 aa13.46□□□□□ -0.26
TPM3P1-201ENST00000413233 ATAD2Q6PL18 1390 aa13.45□□□□□ -0.26
TPM3P1-201ENST00000413233 WASLO00401 505 aaPredicted RBP13.45□□□□□ -0.26
TPM3P1-201ENST00000413233 WAPLQ7Z5K2 1190 aa13.45□□□□□ -0.26
TPM3P1-201ENST00000413233 CADPS2Q86UW7 1296 aa13.45□□□□□ -0.26
TPM3P1-201ENST00000413233 QRICH2Q9H0J4 1663 aa13.44□□□□□ -0.26
TPM3P1-201ENST00000413233 PLEKHH1Q9ULM0 1364 aa13.44□□□□□ -0.26
TPM3P1-201ENST00000413233 NHSL1Q5SYE7 1610 aa13.43□□□□□ -0.26
TPM3P1-201ENST00000413233 ZNF316A6NFI3 1004 aaPredicted RBP13.43□□□□□ -0.26
TPM3P1-201ENST00000413233 ATF3P18847 181 aa13.42□□□□□ -0.26
TPM3P1-201ENST00000413233 TULP4Q9NRJ4 1543 aa13.41□□□□□ -0.26
TPM3P1-201ENST00000413233 BRINP3Q76B58 766 aa13.41□□□□□ -0.26
TPM3P1-201ENST00000413233 CDK19Q9BWU1 502 aa13.4□□□□□ -0.26
TPM3P1-201ENST00000413233 CCDC61Q9Y6R9 512 aa13.4□□□□□ -0.26
TPM3P1-201ENST00000413233 BRD4O60885 1362 aaPredicted RBP13.4□□□□□ -0.26
TPM3P1-201ENST00000413233 RBM6P78332 1123 aaKnown RBP13.39□□□□□ -0.27
TPM3P1-201ENST00000413233 MINK1Q8N4C8 1332 aaPredicted RBP13.39□□□□□ -0.27
TPM3P1-201ENST00000413233 CCDC7Q96M83 1385 aa13.38□□□□□ -0.27
TPM3P1-201ENST00000413233 PLEKHG3A1L390 1219 aa13.38□□□□□ -0.27
TPM3P1-201ENST00000413233 C8orf37Q96NL8 207 aa13.38□□□□□ -0.27
TPM3P1-201ENST00000413233 QTRT2Q9H974 415 aaKnown RBP13.38□□□□□ -0.27
TPM3P1-201ENST00000413233 NALCNQ8IZF0 1738 aa13.37□□□□□ -0.27
TPM3P1-201ENST00000413233 SRPK2P78362 688 aaKnown RBP13.37□□□□□ -0.27
TPM3P1-201ENST00000413233 ZNF692Q9BU19 519 aaPredicted RBP13.37□□□□□ -0.27
TPM3P1-201ENST00000413233 KIF7Q2M1P5 1343 aa13.37□□□□□ -0.27
TPM3P1-201ENST00000413233 EP400Q96L91 3159 aa13.36□□□□□ -0.27
TPM3P1-201ENST00000413233 ATP7BP35670 1465 aa13.36□□□□□ -0.27
TPM3P1-201ENST00000413233 SAFB2Q14151 953 aaKnown RBP eCLIP13.36□□□□□ -0.27
TPM3P1-201ENST00000413233 NUDT16Q96DE0 195 aaKnown RBP13.36□□□□□ -0.27
TPM3P1-201ENST00000413233 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
TPM3P1-201ENST00000413233 FMN2Q9NZ56 1722 aa13.36□□□□□ -0.27
TPM3P1-201ENST00000413233 MST1RQ04912 1400 aa13.35□□□□□ -0.27
TPM3P1-201ENST00000413233 PNPLA6Q8IY17 1366 aa13.34□□□□□ -0.27
TPM3P1-201ENST00000413233 HIRIP3Q9BW71 556 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms