RNA–Protein interactions for RNA: ENST00000409894.7

POLR1B-203, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best) BASIC

Gene POLR1B, Length 4,457 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-203ENST00000409894 CNTLNQ9NXG0 1405 aa11□□□□□ -0.65
POLR1B-203ENST00000409894 KIF3BO15066 747 aa11□□□□□ -0.65
POLR1B-203ENST00000409894 CDR1P51861 262 aa11□□□□□ -0.65
POLR1B-203ENST00000409894 HNRNPMP52272 730 aaKnown RBP eCLIP11□□□□□ -0.65
POLR1B-203ENST00000409894 AXDND1Q5T1B0 1012 aaPredicted RBP11□□□□□ -0.65
POLR1B-203ENST00000409894 NECTIN2Q92692 538 aa11□□□□□ -0.65
POLR1B-203ENST00000409894 IFIT2P09913 472 aaKnown RBP11□□□□□ -0.65
POLR1B-203ENST00000409894 AAMPQ13685 434 aa11□□□□□ -0.65
POLR1B-203ENST00000409894 PRM3Q9NNZ6 103 aa11□□□□□ -0.65
POLR1B-203ENST00000409894 SYNE3Q6ZMZ3 975 aa10.99□□□□□ -0.65
POLR1B-203ENST00000409894 NAP1L1P55209 391 aaKnown RBP10.99□□□□□ -0.65
POLR1B-203ENST00000409894 CBX1P83916 185 aa10.99□□□□□ -0.65
POLR1B-203ENST00000409894 PDCL2Q8N4E4 241 aa10.99□□□□□ -0.65
POLR1B-203ENST00000409894 NAT10Q9H0A0 1025 aaKnown RBP10.99□□□□□ -0.65
POLR1B-203ENST00000409894 HOOK1Q9UJC3 728 aaKnown RBP10.99□□□□□ -0.65
POLR1B-203ENST00000409894 SMC2O95347 1197 aa10.99□□□□□ -0.65
POLR1B-203ENST00000409894 C9orf78Q9NZ63 289 aaPredicted RBP10.99□□□□□ -0.65
POLR1B-203ENST00000409894 RABEP1Q15276 862 aa10.98□□□□□ -0.65
POLR1B-203ENST00000409894 VPS53Q5VIR6 699 aa10.98□□□□□ -0.65
POLR1B-203ENST00000409894 RUNDC1Q96C34 613 aa10.98□□□□□ -0.65
POLR1B-203ENST00000409894 ZHX1Q9UKY1 873 aaPredicted RBP10.98□□□□□ -0.65
POLR1B-203ENST00000409894 FKBP5Q13451 457 aaPredicted RBP10.98□□□□□ -0.65
POLR1B-203ENST00000409894 ERCC4Q92889 916 aaPredicted RBP10.98□□□□□ -0.65
POLR1B-203ENST00000409894 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.98□□□□□ -0.65
POLR1B-203ENST00000409894 LETM1O95202 739 aaPredicted RBP10.98□□□□□ -0.65
POLR1B-203ENST00000409894 PDCL3Q9H2J4 239 aa10.98□□□□□ -0.65
POLR1B-203ENST00000409894 EIF2S2P20042 333 aaKnown RBP10.98□□□□□ -0.65
POLR1B-203ENST00000409894 KINO60870 393 aaKnown RBP10.97□□□□□ -0.65
POLR1B-203ENST00000409894 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.97□□□□□ -0.65
POLR1B-203ENST00000409894 CAGE1Q8TC20 777 aa10.97□□□□□ -0.65
POLR1B-203ENST00000409894 FHOD3Q2V2M9 1422 aa10.97□□□□□ -0.65
POLR1B-203ENST00000409894 CCDC184Q52MB2 194 aa10.97□□□□□ -0.65
POLR1B-203ENST00000409894 PLCD4Q9BRC7 762 aa10.97□□□□□ -0.65
POLR1B-203ENST00000409894 CCDC144AA2RUR9 1427 aa10.96□□□□□ -0.65
POLR1B-203ENST00000409894 BCAR3O75815 825 aa10.96□□□□□ -0.65
POLR1B-203ENST00000409894 CCDC18Q5T9S5 1454 aa10.96□□□□□ -0.65
POLR1B-203ENST00000409894 DIAPH1O60610 1272 aaKnown RBP10.96□□□□□ -0.66
POLR1B-203ENST00000409894 CT47B1P0C2W7 299 aaPredicted RBP10.96□□□□□ -0.66
POLR1B-203ENST00000409894 SKAP1Q86WV1 359 aa10.96□□□□□ -0.66
POLR1B-203ENST00000409894 FAM177A1Q8N128 213 aaPredicted RBP10.96□□□□□ -0.66
POLR1B-203ENST00000409894 NGDNQ8NEJ9 315 aaKnown RBP10.96□□□□□ -0.66
POLR1B-203ENST00000409894 TRERF1Q96PN7 1200 aa10.96□□□□□ -0.66
POLR1B-203ENST00000409894 CGNQ9P2M7 1197 aaKnown RBP10.96□□□□□ -0.66
POLR1B-203ENST00000409894 BRD4O60885 1362 aaPredicted RBP10.95□□□□□ -0.66
POLR1B-203ENST00000409894 K7ELQ4 463 aaPredicted RBP10.95□□□□□ -0.66
POLR1B-203ENST00000409894 XPCQ01831 940 aaPredicted RBP10.95□□□□□ -0.66
POLR1B-203ENST00000409894 DCTN1Q14203 1278 aa10.95□□□□□ -0.66
POLR1B-203ENST00000409894 OLFM4Q6UX06 510 aa10.95□□□□□ -0.66
POLR1B-203ENST00000409894 AEBP1Q8IUX7 1158 aa10.95□□□□□ -0.66
POLR1B-203ENST00000409894 RAPGEF2Q9Y4G8 1499 aa10.95□□□□□ -0.66
POLR1B-203ENST00000409894 CCDC192P0DO97 292 aa10.95□□□□□ -0.66
POLR1B-203ENST00000409894 TRDNQ13061 729 aa10.95□□□□□ -0.66
POLR1B-203ENST00000409894 CCDC47Q96A33 483 aaKnown RBP10.95□□□□□ -0.66
POLR1B-203ENST00000409894 EFCAB2Q5VUJ9 269 aa10.95□□□□□ -0.66
POLR1B-203ENST00000409894 FILIP1Q7Z7B0 1213 aa10.95□□□□□ -0.66
POLR1B-203ENST00000409894 FANCD2Q9BXW9 1451 aa10.94□□□□□ -0.66
POLR1B-203ENST00000409894 MCM2P49736 904 aa10.94□□□□□ -0.66
POLR1B-203ENST00000409894 PDE3AQ14432 1141 aa10.94□□□□□ -0.66
POLR1B-203ENST00000409894 JPH4Q96JJ6 628 aa10.94□□□□□ -0.66
POLR1B-203ENST00000409894 DEF6Q9H4E7 631 aa10.94□□□□□ -0.66
POLR1B-203ENST00000409894 FBXO3Q9UK99 471 aa10.94□□□□□ -0.66
POLR1B-203ENST00000409894 CC2D2AQ9P2K1 1620 aa10.94□□□□□ -0.66
POLR1B-203ENST00000409894 CEBPZQ03701 1054 aaKnown RBP10.94□□□□□ -0.66
POLR1B-203ENST00000409894 TCP11L2Q8N4U5 519 aa10.94□□□□□ -0.66
POLR1B-203ENST00000409894 FAM69CQ0P6D2 419 aa10.94□□□□□ -0.66
POLR1B-203ENST00000409894 ROCK1Q13464 1354 aa10.93□□□□□ -0.66
POLR1B-203ENST00000409894 PDCP20941 246 aa10.93□□□□□ -0.66
POLR1B-203ENST00000409894 TEFQ10587 303 aa10.93□□□□□ -0.66
POLR1B-203ENST00000409894 G3BP1Q13283 466 aaKnown RBP eCLIP10.93□□□□□ -0.662e-7■□□□□ 10.7
POLR1B-203ENST00000409894 DHX37Q8IY37 1157 aaKnown RBP10.93□□□□□ -0.66
POLR1B-203ENST00000409894 C1orf115Q9H7X2 142 aa10.93□□□□□ -0.66
POLR1B-203ENST00000409894 CIZ1Q9ULV3 898 aaPredicted RBP10.93□□□□□ -0.66
POLR1B-203ENST00000409894 LRRFIP1Q32MZ4 808 aaKnown RBP10.93□□□□□ -0.66
POLR1B-203ENST00000409894 CWC22Q9HCG8 908 aaKnown RBP10.93□□□□□ -0.66
POLR1B-203ENST00000409894 SYCE3A1L190 88 aa10.92□□□□□ -0.66
POLR1B-203ENST00000409894 NEXNQ0ZGT2 675 aa10.92□□□□□ -0.66
POLR1B-203ENST00000409894 PNISRQ8TF01 805 aaKnown RBP10.92□□□□□ -0.66
POLR1B-203ENST00000409894 OFD1O75665 1012 aa10.92□□□□□ -0.66
POLR1B-203ENST00000409894 SAFBQ15424 915 aaKnown RBP eCLIP10.92□□□□□ -0.66
POLR1B-203ENST00000409894 TAF3Q5VWG9 929 aa10.92□□□□□ -0.66
POLR1B-203ENST00000409894 NFXL1Q6ZNB6 911 aa10.92□□□□□ -0.66
POLR1B-203ENST00000409894 ERC2O15083 957 aa10.92□□□□□ -0.66
POLR1B-203ENST00000409894 BRPF1P55201 1214 aaPredicted RBP10.92□□□□□ -0.66
POLR1B-203ENST00000409894 KIAA0754O94854 1291 aa10.92□□□□□ -0.66
POLR1B-203ENST00000409894 ATP2B1P20020 1258 aa10.92□□□□□ -0.66
POLR1B-203ENST00000409894 GNAI1P63096 354 aa10.92□□□□□ -0.66
POLR1B-203ENST00000409894 COG3Q96JB2 828 aa10.91□□□□□ -0.66
POLR1B-203ENST00000409894 TNMDQ9H2S6 317 aa10.91□□□□□ -0.66
POLR1B-203ENST00000409894 CARMIL2Q6F5E8 1435 aa10.91□□□□□ -0.66
POLR1B-203ENST00000409894 CCP110O43303 1012 aa10.91□□□□□ -0.66
POLR1B-203ENST00000409894 HMOX1P09601 288 aa10.91□□□□□ -0.66
POLR1B-203ENST00000409894 EXOSC9Q06265 439 aaKnown RBP10.9□□□□□ -0.66
POLR1B-203ENST00000409894 RALYLQ86SE5 291 aaKnown RBP10.9□□□□□ -0.66
POLR1B-203ENST00000409894 UBXN4Q92575 508 aa10.9□□□□□ -0.66
POLR1B-203ENST00000409894 WDR33Q9C0J8 1336 aaKnown RBP10.9□□□□□ -0.66
POLR1B-203ENST00000409894 NESP48681 1621 aa10.9□□□□□ -0.66
POLR1B-203ENST00000409894 EVC2Q86UK5 1308 aa10.9□□□□□ -0.66
POLR1B-203ENST00000409894 SERPINC1P01008 464 aa10.9□□□□□ -0.67
POLR1B-203ENST00000409894 HSP90AB4PQ58FF6 505 aa10.9□□□□□ -0.67
POLR1B-203ENST00000409894 MINK1Q8N4C8 1332 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms